Cololabis saira (Pacific saury): 133446238
Help
Entry
133446238 CDS
T09849
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133446238
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133446238
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133446238
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133446238
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133446238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
133446238
NCBI-ProteinID:
XP_061580204
LinkDB
All DBs
Position
6:49150608..49259514
Genome browser
AA seq
2623 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQGQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQG
QGDGPPQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVK
CEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLE
LLAMATNPHCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGTLN
GFQILHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDE
ELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKM
NALNEVNKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKL
EKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFK
ASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHI
KILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPI
NILKNLVGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDP
QTVRPGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFK
WYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRR
AYMMDDLELIGLDYLWRVVIQGSDDIATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSC
FDRLKASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSR
AFRGKHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRAILNRIKANAAHTKIELFIGGE
VVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPN
PEVESCLPGVIMSLHLRYISFLWQIADLGCNLNMPQLRDGARVLMKLMPPDNTTVENLRA
VCLDHAKLGENSLSPSLDSCFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLK
SGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGYGHVKAVAEACQPNAE
GNVPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPD
ICVIRAVQKIVWASGCGTVQLVFSSNEDISRIYEKTNAAKEPDGEDEQVCCEALEVMTLC
FALMPTALDTLSKEKAWQTFIIDLLLHCHSRSVRQMAQEQFFLMATRCCMGHRPLLFFIT
LLFTVLGSTARERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVK
RSGETGVEETILEGHIGVTKELLAFQTPEKKFYIGSEKGGANLIKELIDDFIFPASNVYL
QYMKSGEFPAEQAIPVCSAPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEALT
EWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMS
GDEKQENESNVDPRDDVFSYHHQFEDKPSGKSEDRKEYNIGVLRHLQVIFGHLAASRLQY
YVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQ
KICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTV
KRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVN
PENQVIQQNEPSEPSPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFD
DGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDK
DSELVKYISDLTISSSKPHQVKMPTVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCN
SVYLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDGLCILLRH
SKNVRFWFSHHVLFSSPARFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPPPTASP
GPSTQGPDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLN
VPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVASRMQSSINGNPPLPNPYG
DTNLTAAVMAVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSE
LLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHY
QKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGTPQYTYN
NWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDS
SPPEDTSLYPHSPGTAQFQQNNHPPHGQPYTGPAAQHMNNPQRPGPAPGPSPAPGPTQPP
TTAPPSTTPGSGSGPRAQETWEGPEEAPAPAPASTPAPAPPKE
NT seq
7872 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaacgacagccagggccagggccag
ggccagggccagggccaggcccccgatgctcagagccaaccgccgctgccccagaaccag
acatcgtctcccaactcgtccaatgagaactccccggtgagccccccggacgagcagggc
cagggggacggacccccccagctggaggaggaggagccggccttcccccacaccgacctg
gccaagctggacgacatgatcaacaggcctcgctgggtcgttcccgttctgccaaaagga
gagttggaagttctcttggaagctgctattgacctcagtaaaaaaggactggatgtgaag
tgcgaggcgtgtcagaggttcttcagagacggactcaccatctccttcaccaagatcctg
acggacgaggccgtcagtggctggaagtttgagatccaccggtgcatcatcaacaacacc
caccgcctggtggagctgtgcgtggctaagctttcccaggactggtttcctctgctggag
ctgctggccatggccaccaacccccactgcaagttccacatctacaacggcacgcggccg
tccgagaccgtccccgccggggcccagctggccgacgacgagctgtacgcccggccgccc
gacccgcgctcccccaagggctggctggtggacttaataaacaagtttggcacgttaaac
gggtttcaaattttgcacgatcgcttcatgagcggccaagcactgaacgtccagatcatc
gctgcacttatcaagccgttcggccagtgttacgagttcctcacgctgcacacggtcaag
aagtacttccttccagtcatcgagatggttccccagttcctggagaatctcacggacgag
gagctcaagaaagaggccaagaacgaagccaaaaacgatgcactgtccatgataatcaag
tctctgaagaacctggcctcccgcgtgccgggccaggaggagactgtgaaaaatctagag
atttttaggttaaaaatgattcttaggttattgcaaatttcttcatttaatggcaaaatg
aatgcactaaatgaggtgaacaaggtgatctccagcgtgtcctactacacgcaccggcac
aaccccgaggaggaggagtggctgacggccgagcgcatggcggaatggatccagcagaac
cacatcctgtccatcgtgctcagggacagtctgcaccagccccagtacgtggagaagctg
gagaagatcctgcgcttcgttatcaaggagaaggctctgaccatgcaggacctggacaac
atctgggccgctcaggccgggaaacacgaggccatcgtgaagaacgtccacgacctgctg
gccaagctggcctgggacttctcccccgagcagctggaccacctgtttgactgtttcaag
gccagctggaccaacgccagcaagaagcagcgggagaagctgctggagctgatccggcgt
ctggccgaggacgacaaggacggcgtgatggcccacaaggttctgaacctgctgtggaac
ctggcgcacagcgacgacgtcccggtggacatcatggaccaggccctgagtgcccacatc
aagatcctggactacagctgctcccaggaccgagacacccagaagatccagtggatcgac
cgcttcatcgaggagctgcggaccaacgacaagtgggtgatccctgctctgaagcagatc
agagaaatctgtagcctgtttggagaagctccccagaacctgagaaagaaaatgccaatt
aacatactaaagaacttagtgggtcagacccagcggagtccccacgtcttctaccgccac
gacctgatcaaccagctgcagcacaaccacgccctggtcacgctggtggccgagaacctg
tcggcctacatggagaccatgaggcagctgtccaaagaagagcaagcggagttcgacccc
cagacggtccggcccgggagccgctacagccacgtccaggaggttcaggagcggctcaac
ttcctaaggttcctgctgaaggacggccagctctggctctgtgctccacaggccaagcag
atctggaagtgtctggcggagaacgccgtgttcctgtgtgaccgcgaggcctgtttcaag
tggtactccaagctgatgggggacgagccggacctggacccggacatcaacaaggacttc
tttgagaacaacgtgctgcagctggacccgtccctgctcacggagaacggcatgaagtgt
ttcgagagattcttcaaggccgtcaactgcagggagggcaagctggtggccaaacgccgc
gcatacatgatggacgacctggagctgatcggcctggactacctgtggagggtggtgatt
caaggaagtgacgacatcgcgacccgagccatcgacctgctgaaggagatctacaccaac
ctgggacccaaactacaagtcaaccaggtggagatccacgaggacttcatccagtcgtgc
ttcgaccggctgaaggcgtcctacgacacgctgtgcgtgctggacggggacaaggacagc
atcaactgtgcccggcaggaggcgatccgcatggtccgggtgctcacggttctgaaggaa
tacatcaacgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtccaga
gctttccgggggaagcacatcaccctgatcgtccgcttccccaaccagggccggcaggtg
gacgacctggacatctggtcccacaccaacgacaccatcggctcggtgcgccgcgccatc
ctcaaccgcatcaaggccaacgccgcgcacaccaagatcgagctgttcatcgggggcgag
gtggtggacccggccgacgaccgcaagctgatcggacagctcaacctgaaggacaagacg
ctgatcacggccaagctgacccaggtgagcgccaacatgccctccagtccggacagctcc
tcagactcgtccacgggctcccccggtaaccacggcaaccactacagcgacgggcccaac
cccgaggtggagagctgcctccccggagtgatcatgtcgctgcatctgcgctacatctcc
ttcctgtggcagatcgctgacctgggctgcaacctgaacatgcctcagctgcgggacgga
gcccgagtcctgatgaagctgatgcccccagataacaccacggtggagaacctcagggcc
gtgtgtctggaccacgccaagctgggggagaacagcctcagtccgtcgctggactcctgc
ttcttcggcccatcgccctcacaagtgctgtacctcatcgaggtcgtctacgcgctgctg
atgcccgccagcgccacgctgggagaggacgccagcgacttccagtacaacttcctgaag
agcggcgggctgccgctggtgctgagcatgctgacccggaacaacttcctgccgtcggcg
gacatggagacgcggcggggggcgtacctgaacgccctgaagatcgccaagctgctgctg
acggccgtgggctacggccacgtgaaggccgtggccgaggcctgccagcccaacgccgag
ggcaacgtgcccgtgtccccgatcaaccaggccacccacgaccaggcgctggtgctgcag
agcgccctgcagaacatccccaaccccgcctccgagtgcatgctgcgcaacgtggccatc
cggctggcccagcagatctctgacgagaatttcttccaggcatcaaagtacatcccagac
atttgtgtgatccgagctgtgcagaaaatcgtttgggcgtcgggctgcgggacggtgcag
ctggtgttcagctccaacgaggacatcagccggatctacgagaagaccaacgctgccaag
gagccggacggggaggacgagcaggtctgctgcgaggccctggaggtgatgacgctgtgc
ttcgccctcatgcccacggcgctggacacgctgagcaaggagaaggcctggcagaccttc
atcatcgacctgctgctgcactgccacagcaggtcggtgcgtcagatggcccaggagcag
ttcttcctcatggccaccaggtgctgcatgggccaccggccgctgctgttcttcatcacg
ctgctcttcaccgtgctggggagcacggccagggaacgagccaaacacgccggcgactac
ttcacgctgctgcgtcacctgctgaactacgcctacaactccaacatcaacctgcccaac
gccgaggttctgctgaacaacgagatcgactggctcaagaggatacgggacgaggtgaag
cggtccggggagacgggcgtggaggagacgatcctggagggacacatcggcgtcaccaag
gagctgctggccttccagactccggagaagaagttctacatcggcagtgagaagggcggg
gccaacctcatcaaggagctgatcgacgacttcatcttcccggcctccaacgtgtacctg
cagtacatgaagagcggggagttcccggcggagcaggccatccccgtgtgcagcgccccc
gcctccatcaacgccggctttgagctgctggtggcgctggccgtcggctgcgtccgcaac
ctgaagcagatcgtggacacgctgaccgacatgtactacctaggctgcgaggcgctgacg
gagtgggagtacctgcccccggtggggccccggcccaccaagggcttcgtggggctgaag
aacgcgggggccacgtgctacatgaactctgtgatccagcagctctacatgatccccccc
atccggaacgggatcctggccatcgaggggacggggacggacgtggacgacgacatgtct
ggggacgagaagcaggagaacgagagcaacgtggacccccgggacgacgtgttctcctac
caccaccagttcgaggacaagccgtcggggaagtcggaggacaggaaggagtacaacatc
ggggtgctgcgccacctgcaggtcatcttcggacacctggccgcgtcccggctgcagtac
tacgtcccccgggggttctggaagcagttcaggttgtggggggagccggtgaacctgagg
gagcagcacgacgccctggagttcttcaactccctggtggacagtctggacgaggccctg
aaggccctgggacacccggccatgctcagcaaggtgctggggggatccttcgccgaccaa
aagatctgccagggctgcccccacaggtatgagtgcgaggaatcgttcaccaccctcaac
gtggacatcaggaaccaccagaacctgctggactccatggagcagtacgtgaagggggac
ctgctggagggggccaacgcctaccactgtgagaagtgcaataagaaggtggacacggtg
aagcggctgctgatcaagaagctgccgcccgtcctggccatccagctgaagcgcttcgac
tacgactgggagcgtgagtgcgccatcaagttcaacgactactttgagttcccgcgggag
ctggacatggagccctacacggtggctggcgtggccaagctggagggcgacgacgtgaac
ccggagaaccaggtgatccagcagaacgagccgtcggagccgtcgccgcccggcagctcc
aagtaccggctggtgggcgtgctggtgcactcgggccaggccagcggcggacactactac
tcctacatcatccagaggaacggcggcgacggggagaagaaccgctggtacaagttcgac
gacggggacgtgacggagtgcaagatggatgacgaggaggagatgaagaaccagtgcttc
ggcggggagtacatgggcgaggtgttcgaccacatgatgaagaggatgtcgtaccggcgg
cagaagcgctggtggaacgcttacatcctgttctacgagcgcatggactccctggacaag
gacagcgaactggtcaagtacatctcggacctgacgatctcgtccagcaagccgcaccag
gtcaagatgcccacggtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcac
aaccgaatgcaatacagcctggaatatttccagttcataaagaaactgctgacctgtaac
agtgtctatttaaaccctcctccaggtcaggaccacctcctccccgaggccgaggagatc
gccatgatcagtgctcagctggcagcccggttcctattcagcaccgggttccacaccaag
aaggtggtgagaggcccggccagcgactggtacgacggcctctgcatcctgctgagacac
agtaagaacgtgcggttctggttctcccaccacgtgctgttctcgtccccggcccggttc
tccgagtacctgctggaatgtcccagcgccgaggtccgcggagccttcgccaagctcatc
gtcttcatcgctcacttttccctgcaggacgggccctgccctccccccaccgcctcgccg
gggccctccacacagggccctgataacctgagtctgagtgaccacctactaagggccgtg
ctgaacctgctgcggagagaagtgtctgaacacggccggcacctgcagcaatacttcaac
ctgttcgtcatgtacgcaaacctgggcctggcggaaaagacgcagctgctgaagctgaac
gtcccggccacattcatgctggtggccctggacgaggggcccggcccccccatcaagtac
cagtacgccgagctgggaaagctctacaccgtggtttcgcagctggtgcgctgctgcgac
gtggcgtcgcgcatgcagtcctccatcaacggaaacccccccctcccaaacccgtacggc
gacaccaacctgacggcggcggtgatggcggtgcagcagctcgtggccgagatcctgttt
gtgaggacgagctacgtgaagaagatcatcgaggactgcagcaactcggaggagacggtg
aagctgctgcgcttctgctgctgggagaacccgcagttctcctccaccgtgctgagcgag
ctgctgtggcaggtggcgtactcctacacctacgagctgaggccttacctggacctgctg
ttgcagatcctgctgatcgaggactcctggcagacacacaggatccacaacgtcctgaag
ggaatccccgacgaccgggacgggctgtttgacaccatccagcgctccaagaaccactac
cagaaacgagcctatcagtgcatcaagtgcatggtggcgctgttcagcaactgcagcgtg
gcctaccagatcctgcagagtaacggggacctgaagcggaagtggacgtgggcggtggag
tggctgggggacgagctggagcggaggccgtacaccggaaccccccagtacacctacaac
aactggtctcctccggtccagagcaacgagacctccaacggctacttcctggagcgttca
cacagcgcccgcatgacgctggccaaagcctgcgagctctgtccagaagagctcaagtgt
actcagggaagtccagggaaggagccggatgaacaggaagcacctgacgaccaagactcg
tcccccccggaggacacgtctctgtacccacattctcctgggacggcccagttccagcag
aacaaccaccccccccacgggcagccgtacaccgggccggccgctcagcacatgaacaac
ccacagcgacccggccccgcccccggaccctcccccgcccccgggccgacccagccgccc
accacggccccccccagcaccactcctggatctggatcaggcccgcgagcacaagagacc
tgggagggcccggaggaggccccggcccccgcccccgcctccaccccggcccccgccccc
cccaaggagtaa
DBGET
integrated database retrieval system
