Cololabis saira (Pacific saury): 133446251
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Entry
133446251 CDS
T09849
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133446251
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
Others
133446251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
ChitinaseA_N
APC1_3rd
Peptidase_C32
Motif
Other DBs
NCBI-GeneID:
133446251
NCBI-ProteinID:
XP_061580236
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Position
1:42933285..43181390
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AA seq
1206 aa
AA seq
DB search
MPAMQREVSSCPKWHRALWLWLLLLAGLFPAAEADITCRSCQPGRKWRGQELLLRLDTGG
RERGVRGDGDGIRPCEAAGSAAGCARAPRAENARPSPERSNPRASGAGATQNRSADTKVS
RGRRDSGGRAGVRGREPAERRARAPRSEPRWSAEERRAAAAKDEPKVNSSTFALSGDSSH
NQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGTKTILSYL
YVSPNNKRKIMLLTDPEVESSLLISTDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHD
QKLYSSVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETSISEAQALYVTCKLQNC
TDANKGKPFPGYIDPNSLVVQDEYVFVQVSTSGRPVYYVSAKRDVFTPMKLPKYTLPKEL
HVISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALGSVVSSMGLEGNVMVDLYEVA
GIKGMFLANKKTDNQVKTHITYNRGRDWRLLQAPSKDLRGNGIHCALPYCSLHLHLHVSA
NPYTSGNIASRESAPGIIVASGSIGSELTTNNVSVFITSDAGNTWRQIFDEEYAVLYLDQ
GGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFTSTPLFVDGVLGEPGEETLIMTIFGHVS
HRSEWQLVKIDFRSIFNRRCTEADYQTWHLHDQGEPCLMGVKRIYRKLKPTSRCVMGKAY
SVTMTSGACDCTEADFECDYGYERRTDGKCSPAFWFHPSSMSRSCTTGMTFLNSTGYRKV
VSNNCTAGVSSEYTARRLQCPVLAPRGLQLVTSEGALTATLGANVTFLVFLEEGDGARTS
VTVDFGDGHAVTYSNVSSIEDGIKHIYKAVGIYRVTATVENSLGSETSALYLHVTCQLEY
IHLSAPFVAVRNKEVNLTAVLWPSQVGTVTYIWWIGNNTEQPVITLEGSVACTFSREGTN
SVTVQVSAGSSILQDKKSIAVHEYFRSHLLAFSSNLDEHNPDIAEWRLDVSRVIKNALIQ
ATGVREDQLLVTVLPGLPTAAEFFLLPDKLATEGKPEKSSAHLDQLSEVLLSALNQNFVQ
FTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLN
VYAQMQNEKEQEMMSPVDPSEATPSSQQDLVTSLEILDTEFNPRPIGCMKPHVHVKFSTE
LPTFIV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatgcagagggaggtcagctcctgcccgaagtggcaccgcgcgctctggctc
tggctcctgctcctggccgggctcttccccgcggccgaggcggacatcacctgcaggtca
tgtcagcccgggagaaagtggcgtggacaggaattactgctgagactggacacgggaggg
cgagagaggggagttcggggtgatggagacgggatccgtccctgcgaggctgcgggctcc
gccgctggatgcgctcgggctcctcgcgcggagaacgcgcgtccaagcccggaacggagt
aacccgcgcgcatcaggagccggggccacccagaaccgctccgcagacactaaagtttcc
cgcggcaggagggacagcggcggcagagccggagtccggggccgggagccggcggagcgc
agagccagggcgccgcgctccgagccgcgctggagcgcagaggagcgcagagccgccgcg
gccaaagacgagcccaaagtcaacagctccacgttcgcgctgagcggggattcctcccac
aaccaggccatggtgcactggtccggccagaacagcagcgtgattctcatgctgaccaaa
ttgtttgacttcaacctgaacagcgtgactgagagttcattatggaggtcgactgactac
ggagcaacgtaccagaaactgaacgacaaagtgggaacgaagaccatcctcagttatctg
tacgtgagccccaacaacaagagaaagatcatgctgctgaccgatccggaggtggagagc
agcctcctgatcagcaccgatgaaggagccacctaccagaagtaccggctgaacttctac
atactgagcctgcttttccaccccgaacaggaggactggattttggcctacagccacgac
caaaagctctacagctccgtggagtttgggagaagatggcaactggtgcatgaaagagtg
gctccgaatcgattttactggtctaaaatgggtttggacaaagaaccgggcctgattcac
ctggaaaccagcatctcagaagcacaggcgctgtatgttacctgcaagctgcagaactgc
acggatgccaacaagggcaaaccattccccggctacattgaccccaattccctggtggtg
caagatgagtatgtgtttgtccaggtgtcgacgtcggggaggccggtctactacgtttct
gcaaagagggacgtcttcacccccatgaagctgcccaagtacacgctgcccaaggagctg
cacgtgatcagcacggacgagaaccgcgtggtggcggccgtgcaggagtggaaccagaac
gagacctacaacctgtacgtgtcggacacgtcgggggtgtactacaccctggccctgggg
agcgtggtcagcagcatgggactggagggcaacgtcatggtcgacctgtacgaggtagcg
ggaataaaagggatgttcctcgccaacaaaaagacggacaaccaagtgaagacgcacatc
acttacaacagaggccgggactggaggttactgcaggccccgagcaaagacctgcgaggc
aacggcatccactgcgcgctgccgtactgttcgttacatctccacctccacgtgtctgcc
aatccctacacatctggaaacatagccagcagggagtcggcgccggggatcatcgtcgca
tcaggctccatcggctcagagctgaccaccaacaacgtcagcgtgttcatcacctctgat
gcaggaaacacttggagacagatttttgacgaggagtacgcagtgctttacctggaccaa
ggtggagctttggttgcgataagacacactccgcttcccatccgacacctgtggttgagc
ttcgacgaaggccggcagtggaacaagtacagcttcaccagcacgcctctgtttgtggac
ggggtgctgggcgagcccggggaggagacgctcatcatgacgatcttcggccacgtcagt
catcgctccgagtggcagctggtgaaaatcgacttcaggtccatcttcaacaggaggtgc
acggaggccgactaccagacgtggcacctgcacgaccagggtgagccgtgcctcatggga
gtgaagaggatctaccggaagctgaagcccacgtccaggtgcgtcatgggaaaagcctac
tcggtgacgatgacgtcaggcgcctgcgactgcacagaggccgactttgagtgtgattat
ggctacgagagacggaccgacggcaagtgcagccctgccttttggttccatccatcatcc
atgtccaggagttgcaccacggggatgacgttcctcaacagcaccggctacaggaaggtg
gtgtctaacaactgcacggccggagtgagctctgagtacacggccaggcggctgcagtgt
cccgtcctggcgccccgaggtctccagctggtcaccagcgagggcgcgctgaccgccacg
ctgggcgccaacgtcaccttccttgttttcctggaagagggtgacggggcgaggactagc
gtcacggtggacttcggagacggccacgcagtgacgtactccaacgtgagctccatcgag
gacggcatcaaacacatctacaaggctgtgggaatctacagggtcactgccaccgtggag
aacagcctcggctcggagaccagcgcgctctacctccacgtgacatgtcagctggagtac
atccatctctcagctccctttgtggcggtgaggaacaaggaagtgaacctgacggcagtt
ctgtggcccagccaggtgggaacggtcacctacatctggtggatcggcaacaacaccgag
cagccggtcatcacgctggaggggagcgtggcgtgcaccttctccagggagggcaccaac
agcgtcaccgtgcaggtgtctgcagggagcagcatcctgcaggacaagaagagcatcgct
gtgcacgagtacttccgctcccatctgctggccttttcctcaaacctggacgagcacaac
cccgacattgcagagtggaggctggacgtgagccgggtcatcaagaacgccctgatacag
gctaccggcgtgagggaggaccagctcctggtcaccgtgctgccgggtttacccacagca
gcagagttcttcctcctgcccgacaagctcgccacggaggggaaaccggagaagagttct
gcccacttagatcagctctctgaggtcctgctgagcgccttgaatcaaaactttgtccag
ttcacgttgaggccgggggtccaggtcaccgtgtacgccgctcacctttcggcagcgccc
cttgtggacaccagcgagaaccacagcggctccgccatgctaatgctgctgtccgtggtg
gtcgtgggtttagccgtgtttgtcatctacaaattcaagaggaagatcccaggcctcaac
gtctatgcgcagatgcagaacgaaaaagaacaagaaatgatgagtccagtggatccatcg
gaggccacgcccagctcgcagcaggacctggtgacttctttggagattctggacacagag
tttaaccctcggcccatcggatgtatgaagcctcatgtacatgtaaaattctccacagaa
ctccccacattcatcgtgtga
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