Cololabis saira (Pacific saury): 133446264
Help
Entry
133446264 CDS
T09849
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133446264
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133446264
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133446264
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133446264
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133446264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
133446264
NCBI-ProteinID:
XP_061580249
LinkDB
All DBs
Position
6:complement(50789300..50897428)
Genome browser
AA seq
2627 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQGQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQG
QGDGPPQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVK
CEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLE
LLAMATNPHCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGTLN
GFQILHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDE
ELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKM
NALNEVNKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKL
EKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFK
ASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHI
KILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPI
NILKNLVGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDP
QTVRPGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFK
WYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRR
AYMMDDLELIGLDYLWRVVIQGSDDIATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSC
FDRLKASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSR
AFRGKHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRAILNRIKANAAHTKIELFIGGE
VVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPN
PEVESCLPGVIMSLHLRYISFLWQIADLGCNLNMPQLRDGARVLMKLMPPDNTTVENLRA
VCLDHAKLGENSLSPSLDSCFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLK
SGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGYGHVKAVAEACQPNAE
GNVPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPD
ICVIRAVQKIVWASGCGTVQLVFSSNEDISRIYEKTNAAKEPDGEDEQVCCEALEVMTLC
FALMPTALDTLSKEKAWQTFIIDLLLHCHSRSVRQMAQEQFFLMATRCCMGHRPLLFFIT
LLFTVLGSTARERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVK
RSGETGVEETILEGHIGVTKELLAFQTPEKKFYIGSEKGGANLIKELIDDFIFPASNVYL
QYMKSGEFPAEQAIPVCSAPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEALT
EWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMS
GDEKQENESNVDPRDDVFSYHHQFEDKPSGKSEDRKEYNIGVLRHLQVIFGHLAASRLQY
YVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQ
KICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTV
KRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVN
PENQVIQQNEPSEPSPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFD
DGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDK
DSELVKYISDLTISTSKPHQVKMPTVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCN
SVYLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDGLCILLRH
SKNVRFWFSHHVLFSSPARFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPPPTASP
GPSTQGPDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLN
VPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVASRMQSSINGNPPLPNPYG
DTNLTAAVMAVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSE
LLWQVCPQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRS
KNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGTPQ
YTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPD
DQDSSPPEDTSLYPHSPGTAQFQQNNHPPHGQPYTGPAAQHMNNPQRPGPAPGPSPAPGP
TQPPTTAPPSTTPGSGSGPRAQETWEGPEEAPAPAPASTPAPAPPKE
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaacgacagccagggccagggccag
ggccaaggccagggccaggcccccgatgctcagagccaaccgccgctgccccagaaccag
acatcgtcccccaactcgtccaatgagaactccccggtcagccccccggacgagcagggc
cagggggacggacccccccagctggaggaggaggagccggccttcccccacaccgacctg
gccaagctggacgacatgatcaacaggcctcgctgggtcgttcccgttctgccaaaagga
gagttggaagttctcttggaagctgctattgacctcagtaaaaaaggactggatgtgaag
tgcgaggcgtgtcagaggttcttcagagacggactcaccatctccttcaccaagatcctg
acggacgaggccgtcagtggctggaagtttgagatccaccggtgcatcatcaacaacacc
caccgcctggtggagctgtgcgtggctaagctttcccaggactggtttcctctgctggag
ctgctggccatggccaccaacccccactgcaagttccacatctacaacggcacgcggccg
tccgagaccgtccccgccggggcccagctggccgacgacgagctgtacgcccggccgccc
gacccgcgctcccccaagggctggctggtggacttaataaacaagtttggcacgttaaac
gggtttcaaattttgcacgatcgcttcatgagcggccaagcactgaacgtccagatcatc
gctgcacttatcaagccgttcggccagtgttacgagttcctcacgctgcacacggtcaag
aagtacttccttccagtcatcgagatggttccccagttcctggagaacctcacggacgag
gagctcaagaaagaggccaagaacgaagccaaaaacgatgcactgtccatgataatcaag
tctctgaagaacctggcctcccgcgtgccgggccaggaggagactgtgaaaaatctagag
atttttaggttaaaaatgattcttaggttattgcaaatttcttcatttaatggcaaaatg
aatgcactaaatgaggtgaacaaggtgatctccagcgtgtcctactacacgcaccggcac
aaccccgaggaggaggagtggctgacggccgagcgcatggcggagtggatccagcagaac
cacatcctgtccatcgtcctcagggacagtctgcaccagccgcagtacgtggagaagctg
gagaagatcctgcgcttcgttatcaaggagaaggctctgaccatgcaggacctggacaac
atctgggccgctcaggccgggaaacacgaggccatcgtgaagaacgtccacgacctgctg
gccaagctggcctgggacttctcccccgagcagctggaccacctgtttgactgtttcaag
gccagctggaccaacgccagcaagaagcagcgggagaagctgctggagctgatccggcgt
ctggccgaggacgacaaggacggcgtgatggcccacaaggttctgaacctgctgtggaac
ctggcgcacagcgacgacgtcccggtggacatcatggaccaggccctgagtgcccacatc
aagatcctggactacagctgctcccaggaccgagacacccagaagatccagtggatcgac
cgcttcatcgaggagctgcggaccaacgacaagtgggtgatccctgctctgaagcagatc
agagaaatctgtagcctgtttggagaagctccccagaacctgagaaagaaaatgccaatt
aacatactaaagaacttagtgggtcagacccagcggagtccccacgtcttctaccgccac
gacctgatcaaccagctgcagcacaaccacgccctggtcacgctggtggccgagaacctg
tcggcctacatggagaccatgaggcagctgtccaaagaagagcaagcggagttcgacccc
cagacggtccggcccgggagccgctacagccacgtccaggaggtgcaggagcggctcaac
ttcctgaggttcctgctgaaggacggccagctctggctctgtgctccacaggccaagcag
atctggaagtgtctggcggagaacgccgtgttcctgtgtgaccgcgaggcctgtttcaag
tggtactccaagctgatgggggacgagccggacctggacccggacatcaacaaggacttc
tttgagaacaacgtgctgcagctggacccgtccctgctcacggagaacggcatgaagtgt
ttcgagagattcttcaaggccgtcaactgcagggagggcaagctggtggccaaacgccgc
gcatacatgatggacgacctggagctgatcggcctggactacctgtggagggtggtgatt
caaggaagtgacgacatcgcgacccgagccatcgacctgctgaaggagatctacaccaac
ctgggacccaaactacaagtcaaccaggtggagatccacgaggacttcatccagtcgtgc
ttcgaccggctgaaggcgtcctacgacacgctgtgcgtgctggacggggacaaggacagc
atcaactgtgcccggcaggaggcgatccgcatggtccgggtcctcacggttctgaaggaa
tacatcaacgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtccaga
gcgttccgggggaagcacatcaccctgatcgtccgcttccccaaccagggccggcaggtg
gacgacctggacatctggtcccacaccaacgacaccatcggctcggtgcgccgcgccatc
ctcaaccgcatcaaggccaacgccgcgcacaccaagatcgagctgttcatcgggggggag
gtggtggacccggccgacgaccgcaagctgatcggacagctcaacctgaaggacaagacg
ctgatcacggccaagctgacccaggtgagcgccaacatgccctccagtccggacagctcc
tccgactcgtccacgggctcccccggtaaccacggcaaccactacagcgacgggcccaac
cccgaggtggagagctgcctccccggagtgatcatgtcgctgcatctgcgctacatctcc
ttcctgtggcagatcgctgacctgggctgcaacctgaacatgcctcagctgcgggacgga
gcccgagtcctgatgaagctgatgcccccagataacaccacggtggagaacctcagggcc
gtgtgtctggaccacgccaagctgggggagaacagcctcagtccgtcgctggactcctgc
ttcttcggcccgtcgccctcacaagtgctgtacctcatcgaggtggtctacgcgctgctg
atgcccgccagcgccacgctgggcgaggacgccagcgacttccagtacaacttcctgaag
agcggcgggctgccgctggtgctgagcatgctgacccggaacaacttcctgccgtcggcg
gacatggagacgcggcggggggcgtacctgaacgccctgaagatcgccaagctgctgctg
acggccgtgggctacggccacgtgaaggccgtggccgaggcctgccagcccaacgccgag
ggcaacgtgcccgtgtccccgatcaaccaggccacccacgaccaggcgctggtgctgcag
agcgccctgcagaacatccccaaccccgcctccgagtgcatgctgcgcaacgtggccatc
cggctggcccagcagatctctgacgagaatttcttccaggcatcaaagtacatcccagac
atttgtgtgatccgagctgtgcagaaaatcgtttgggcgtcgggctgcgggacggtgcag
ctggtgttcagctccaacgaggacatcagccggatctacgagaagaccaacgctgccaag
gagccggacggggaggacgagcaggtgtgctgcgaggccctggaggtgatgacgctgtgc
ttcgccctcatgcccacggcgctggacacgctgagcaaggagaaggcctggcagaccttc
atcatcgacctgctgctgcactgccacagcaggtcggtgcgtcagatggcccaggagcag
ttcttcctcatggccaccaggtgctgcatgggccaccggccgctgctgttcttcatcacg
ctgctcttcaccgtgctggggagcacggccagggaacgagccaaacacgccggcgactac
ttcacgctgctgcgtcacctgctgaactacgcctacaactccaacatcaacctgcccaac
gcagaggttctgctgaacaacgagatcgactggctcaagaggatacgggacgaggtgaag
cggtccggggagacgggcgtggaggagacgatcctggagggacacatcggcgtcaccaag
gagctgctggccttccagactccggagaagaagttctacatcggcagtgagaagggcggg
gccaacctcatcaaggagctgatcgacgacttcatcttcccggcctccaacgtgtacctg
cagtacatgaagagcggggagttcccggcggagcaggccatccccgtgtgcagcgccccc
gcctccatcaacgccggcttcgagctgctggtggcgctggccgtcggctgcgtccgcaac
ctgaagcagatcgtggacacgctgaccgacatgtactacctaggctgcgaggcgctgacg
gagtgggagtacctgcccccggtggggccccggcccaccaagggcttcgtggggctgaag
aacgcgggggccacgtgctacatgaactctgtgatccagcagctctacatgatccccccc
atccggaacgggatcctggccatcgaggggacggggacggacgtggacgacgacatgtct
ggggacgagaagcaggagaacgagagcaacgtggacccccgggacgacgtgttctcctac
caccaccagttcgaggacaagccgtcggggaagtcggaggacaggaaggagtacaacatc
ggggtgctgcgccacctgcaggtcatcttcggacacctggccgcgtcccggctgcagtac
tacgtcccccgggggttctggaagcagttcaggttgtggggggagccggtgaacctgagg
gagcagcacgacgccctggagttcttcaactccctggtggacagtctggacgaggccctg
aaggccctgggacacccggccatgctcagcaaggtgctggggggatccttcgccgaccag
aagatctgccagggctgcccccacaggtatgagtgcgaggagtcgttcaccaccctcaac
gtggacatcaggaaccaccagaacctgctggactccatggagcagtacgtgaagggggac
ctgctggagggggccaacgcctaccactgtgagaagtgcaataagaaggtggacacggtg
aagcggctgctgatcaagaagctgccgcccgtcctggccatccagctgaagcgcttcgac
tacgactgggagcgcgagtgcgccatcaagttcaacgactactttgagttcccgcgggag
ctggacatggagccctacacggtggccggcgtggccaagctggagggcgacgacgtgaac
ccggagaaccaggtgatccagcagaacgagccgtcggagccgtcgccgcccggcagctcc
aagtaccggctggtgggcgtgctggtgcactcgggccaggccagcggcggacactactac
tcctacatcatccagaggaacggcggcgacggggagaagaaccgctggtacaagttcgac
gacggggacgtgacggagtgcaagatggacgacgaggaggagatgaagaaccagtgcttc
ggcggggagtacatgggcgaggtgttcgaccacatgatgaagaggatgtcgtaccggcgg
cagaagcgctggtggaacgcttacatcctgttctacgagcgcatggactccctggacaag
gacagcgaactggtcaagtacatctcggacctgaccatctcgaccagcaagccgcaccag
gtcaagatgcccacggtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcac
aaccgaatgcaatacagcctggaatatttccagttcataaagaaactgctgacctgtaac
agtgtctatttaaaccctcctccaggtcaggaccacctcctccccgaggccgaggagatc
gccatgatcagtgctcagctggcagcccggttcctgttcagcaccgggttccacaccaag
aaggtggtgagaggcccggccagcgactggtacgacggcctctgcatcctgctgagacac
agtaagaacgtgcggttctggttctcccaccacgtgctgttctcgtccccggcccggttc
tccgagtacctgctggaatgtcccagcgccgaggtccgcggagccttcgccaagctcatc
gtcttcatcgctcacttctccctgcaggacgggccctgccctccccccaccgcctcgccg
gggccctccacgcagggccctgataacctgagtctgagtgaccacctactaagggccgtg
ctgaacctgctgcggagagaagtgtctgaacacggccggcacctgcagcaatacttcaac
ctgttcgtcatgtacgcaaacctgggcctggcggaaaagacgcagctgctgaagctgaac
gtcccggccacgttcatgctggtggccctggacgaggggcccggcccccccatcaagtac
cagtacgccgagctgggcaagctctacaccgtggtttcgcagctggtgcgctgctgcgac
gtagcctcgcgcatgcagtcctccatcaacggaaacccccccctcccaaacccgtacggc
gacaccaacctgacggcggcggtgatggcggtgcagcagctcgtggccgagatcctgttt
gtgaggacgagctacgtgaagaagatcatcgaggactgcagcaactcggaggagacggtg
aagctgctgcgcttctgctgctgggagaacccgcagttctcctccacggtgctgagcgag
ctgctgtggcaggtctgtccccaggtggcgtactcctacacctacgagctgaggccttac
ctggacctgctgttgcagatcctgctgatcgaggactcctggcagacacacaggatccac
aacgtcctgaagggaatccccgacgaccgggacgggctgttcgacaccatccagcgctcc
aagaaccactaccagaaacgagcctaccagtgcatcaagtgcatggtggcgctgttcagc
aactgcagcgtggcctaccagatcctgcagagtaacggggacctgaagcggaagtggacg
tgggcggtggagtggctgggggacgagctggagcggaggccgtacaccggaaccccccag
tacacctacaacaactggtctcctccggtccagagcaacgagacctccaacggctacttc
ctggagcgttcacacagcgcccgcatgacgctggccaaagcctgcgagctctgtccagaa
gagctcaagtgtactcagggaagtccagggaaggagccggatgaacaggaagcacctgac
gaccaagactcgtcccccccggaggacacgtctctgtacccacattctcctgggacggcc
cagttccagcagaacaaccaccccccccacgggcagccgtacaccgggccggccgctcag
cacatgaacaacccacagcgacccggccccgcccccggaccctcccccgcccccgggccg
acccagccgcccaccacggccccccccagcaccactcctggatctggatcaggcccgcga
gcacaagagacctgggagggcccggaggaggccccggcccccgcccccgcctccaccccg
gcccccgccccccccaaggagtaa
DBGET
integrated database retrieval system
