Cololabis saira (Pacific saury): 133446299
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Entry
133446299 CDS
T09849
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133446299 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133446299 (vps54)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133446299 (vps54)
Membrane trafficking [BR:
csai04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
133446299 (vps54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
133446299
NCBI-ProteinID:
XP_061580327
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All DBs
Position
1:747812..1063638
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AA seq
999 aa
AA seq
DB search
MASGRSSSPAPRPGGRGRDGIFLKEQAGPAQRCRPVRSLPDVCPKEPTGEGRVLFNGPSV
VSEHDCWTVFSSKVNLPAALNDPRLAKRESDFFTKTWGLDFTETEVMPSFCLPVLTREDF
SPYLQEMSPRERIHERCKTICPNKDDVDAVSSISSNHDKSRAELEQVPKMFMRPDFALDD
PTTFNAVLPWSHFHGAGGKSSRDGASSKLLQEKLSHYLDVVEVSIARQISLRSDAFFHAM
SSQHELQDRLGETQHAVAVLRGRMAAMDRVMCQGPLRALGAALTRNNLVKLHGKLKLMAA
VQQTQPTVQLLLHTAEFVGALELIGTTKEVLQQELQGVTSFRHLGSQLCELEKLIDKMMV
EDFSMYARSDLNRNLREEPLVLEKDQQPNAGTPKERLESLVFGLLRQKKLDLLDIYSHET
IGAAKNIVTQCVSGSVELIEEIDTDVVTKLPDQMRLMTFPQWFELLKLVFQNFLLFLQRV
KATLTVIRKVVLEVLDSNQRTRVLAEAGSGSGGSGAQGQGPPQGQQAPQGPPVLQGEAEL
AYLTHEGLFISDALNEAQQRQQGGPVVQDQNQDQDPVLEPRIQQGSEPEIQETSGTRETG
FMSGETMMPSDSELNRVLTNIQDLLHTASDVSHDRCVKVLTARAKDGSLERLSSAEFVSL
SQAVDGFVRDTEELVGRRSVSLRGALQSQANRFVQRFHEERKNKLSLLLDNERWKQAEVP
AEFQDLVDSIADGRITLPDRKNPGPDEKRPAEYLLVNGQRYAVVGTVLLLIRIFLEYCQC
VNDIPSITTDMLTRLADLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVV
NYIPVIRTHFETKLQPKQFSVLRHFDHITKDYNDHIAEISAKLVAIMDSLFEKNLSKYEV
KAPMPSLCFRNVCKQMAKMHEAISDLLPEEQTQMLFLRINSSFKLHLKRQLARLGVVNDG
GPQNGLVVVDVAFYTENLQVLRSLERLDLNMNEIWDTKR
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggacgcagctcctccccggctcctcgtcccggcggccgaggccgagacggg
atcttcctcaaggagcaggccggcccggcccaacgctgccggcccgtccgctcgctgccc
gacgtctgccccaaggagcccacgggtgaggggcgggttctgttcaacgggccgtccgtg
gtgtcggagcacgactgctggaccgtgttcagctccaaggtcaacctccccgccgcgctc
aacgacccgcggctcgccaagcgggagtcggacttcttcaccaagacgtgggggctggac
ttcacggagacggaggtgatgccgtcgttctgcctccccgtcctcacccgggaggacttc
agcccgtacctgcaggagatgagcccgagggaacggatccacgagcgctgcaagacgatc
tgccccaacaaagacgacgtggacgccgtctccagtatcagcagcaaccacgacaagtcc
agagcggagctggagcaagtccccaagatgttcatgaggcccgacttcgccctggacgac
ccgacaaccttcaacgccgtcttgccctggtcgcacttccacggagccggagggaagagc
agccgggacggagcgtcgtccaagttgctgcaggagaagctgagccactacctggacgtg
gtggaggtcagcatcgcccgccagatctccctgcgctccgacgccttcttccacgccatg
tcgtcgcagcacgagctgcaggaccgcctgggggagacgcagcacgccgtggcggtgctg
cggggccgcatggccgccatggaccgggttatgtgccaggggcccctgcgggccctcggt
gccgccttgacccgcaacaacctggtgaagctgcacggcaagctgaagctgatggcggcg
gtgcagcagacgcagcccacggtgcagctgctgctgcacacggccgagttcgtgggggcg
ctggagctgatcgggaccaccaaggaggtgctgcagcaggagctgcagggggtgaccagt
ttcagacatctgggctctcagctctgtgagctggagaagttgatcgataagatgatggtg
gaggatttcagcatgtacgcccgcagtgacctaaaccggaacctgagggaggaaccgctg
gtcctggagaaggatcaacaaccaaacgctgggacacccaaggagcgtctggagtcgctg
gtgttcggcctgctgcggcagaagaaactggacctgctggacatttacagccacgagacg
atcggagccgccaagaacatcgtcacgcagtgcgtgtccggcagcgtagagctcatcgag
gagatcgacaccgacgtcgtcactaaactccccgaccagatgcgtctcatgacgttcccc
cagtggttcgagctgctgaaactcgtcttccagaacttccttctgttcctgcagagagtc
aaggcgactctcaccgtgatcaggaaggtggttctggaggttctggactccaaccagagg
acgcgggtcctggcggaggctggatcggggtcgggggggtcgggggcacagggccagggc
cctccccagggccagcaggccccccagggccccccggtgctgcagggagaggcggagctg
gcctacctcacccacgagggcttgttcatcagcgacgccctgaacgaggcccagcagagg
cagcaggggggcccggtggtccaggaccagaaccaggaccaggacccggtcctggaaccc
cggatccagcagggcagcgagccggagatccaggagacctccggaaccagagagaccgga
ttcatgtctggcgagaccatgatgcccagcgactcggagctgaaccgggtcctcaccaac
atccaggacctgctgcacacggcgtcagacgttagccacgaccgctgcgttaaggtgctg
acggcccgggccaaggacgggtctctggagcgtctcagctcggccgagttcgtgtctctg
tcccaggccgtggacgggtttgtccgggacacggaggagctggtgggacggaggagtgtc
tcgctgcggggggcgctgcagagccaggccaaccgcttcgtgcagagattccacgaggag
aggaagaacaagctcagcctcctcctggataacgagcggtggaaacaggccgaggttcca
gcagaattccaggatctggtcgactccatcgccgacggcagaataacactaccggaccgg
aaaaacccaggtccggatgagaagaggccggcggaatatctgctggtgaacgggcagaga
tacgcagtagtcgggacggtgctgctgctgatccggatcttcctggaatactgccagtgt
gtcaacgacatcccgtccatcactacggacatgctgacccgtctggcagacctgctgaag
cacttcaactcccggagctgccagttggttctgggagccggagctctgcaggtggtcggg
ctgaagacgatcaccaccaagaacctggcgctggcgtcccgctgcctgcagctggtggta
aactacattcccgtcatcagaactcactttgagaccaaactacaacccaaacagttcagc
gtcctgcggcacttcgaccacatcaccaaggactacaacgaccacatagccgagatctcc
gccaagctggtggccatcatggacagtctgtttgagaagaacctgtccaagtacgaggtg
aaggctccgatgccgtcgctctgtttcaggaacgtctgtaaacagatggcaaagatgcac
gaagccatttcagacctgttacctgaggagcaaacgcagatgttgttcctgagaatcaac
tccagcttcaagctgcacctgaagaggcagctggctcggctcggggtcgtcaacgacggc
gggccgcagaacgggctggtggtggtggacgtggccttctacacggagaacctgcaggtc
ctgaggagcctggagagactggacctgaacatgaacgagatctgggacaccaagaggtga
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