Cololabis saira (Pacific saury): 133446403
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Entry
133446403 CDS
T09849
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133446403 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133446403 (u2af1)
Spliceosome [BR:
csai03041
]
Complex A
U2 snRNP components
U2 related factors
133446403 (u2af1)
Complex B
133446403 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
IL4
Motif
Other DBs
NCBI-GeneID:
133446403
NCBI-ProteinID:
XP_061580411
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Position
6:14481174..14491765
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AA seq
235 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SMDGLTCTVSDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRNE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGGRRRSRSRSRERRSRSRDRGRGGGGGRDHERRRSRDRERSGRF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacctggcatccatttttgggacagaaaaagataaggtcaactgttctttt
tatttcaaaattggtgcctgccgacatggagaccgctgctccagattacacaacaagcca
acatttagtcagacgattgcgctgcttaacatttaccggaaccctcagaacagcgcccag
tccatggacggactgacctgtaccgtcagtgacatggagatgcaggagcactatgacgaa
ttctttgaggaggtcttcacagaaatggaggaaaagtacggagaagtggaagaaatgaac
gtctgtgacaaccttggggaccatcttgtgggaaatgtttatgtgaagttccgtaatgag
gaggatgctgagaaggccgtgatagacctgaataaccgctggtttaacgggcagcccatc
catgccgagctctctccggtcacagattttagagaagcctgctgtcgccagtatgagatg
ggagagtgcacccgtggtggcttctgtaacttcatgcatctgaagcccatctctcgtgag
ctgaggagagagctgtacggccgccggaggaaggggggccgccgcaggtctcggtctcga
tcgagagaaaggaggtcccgctccagggacagaggccgaggaggcggaggcggccgggac
cacgagagacgtcgctccagagacagagagcgctcagggcggttctga
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