Cololabis saira (Pacific saury): 133446423
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Entry
133446423 CDS
T09849
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133446423 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Protocadherins
133446423 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FctA
DUF4577
Motif
Other DBs
NCBI-GeneID:
133446423
NCBI-ProteinID:
XP_061580428
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Position
6:complement(17187226..17191085)
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AA seq
979 aa
AA seq
DB search
MTRRTLVTCWHRWVFIFSLQQFLFAPWAHSEGNTVRYQTKEEDAPGTVIGNLAKDMSLTP
SHSSKINFRMMKQFNDSFVRVRESDGELTVGERIDRERICRHTPQCLITFDVVNFSKDRY
KLIHVEVEIKDVNDNSPEFPSKESIVEISENAAVGSRIPLDPAVDADVGSNYIQSYQISV
NGHFTIDVLLRADGVKYAELVLMKELDREIQSSYNVELVATDGGNPHRSGSTKITVKVTD
FNDNSPVFDQNSFSVSLPEDAPVGTIILDLHAVDTDEGLNGEVVYGFGKQVSHEIRELFR
VDGKSGRLTLRSPLDFEDKRTYELDVQATDLGPNPTPSVCKIIIHVTDVNDNPPEISITP
MTSITTGIAYISEAADRDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLRQAHEDSYMIV
TAAVLDRERISEYNLTVMAEDFGSPPMRKITQYTIRLSDENDNAPHFAKAVYEVSVVENN
APGAYITTVEASDVDLGNNGKITYRLVDSVIMGSPVNTFVSINSVSGSIYALRSFNYEVM
KQLDIHIQASDGGSPQLQSTAIVRLKIVDQNDNQPSIIAPPLYKGSAEVFLPKDAPAGYV
VTQIKATDADDGINAQLSYKITEGGHLGFSINKDTGKMHVSRQLTYDLSDNVKVTVSVSD
NGSPSLTATAEILFSFIEGTLPSLPSLPQNGSEELFEWDTSMAIIIILAGSCSLLLLAII
LITTICSRRKKETREGGFDGKEDIPDVEKVESGHIDSLIASHKGKAFDSRPFPEDPPLAS
SNTAEPDCEDGRQTAGMFESNSRTMEGKLKGYSTLPGYGKETVRPITIWKGNSFTTISAR
EPHFSGKDSGKGDSDFNDSDSDISGDVHKKESPPVNSLWACTSECKVLGHSDRCWSPSAT
RPNTSLASGPHLSTFSKTATLPRDARRENYYPALPKTSGLQSVYEKVQTQEFDYILVGPP
TPARIQETDEISIPEYTNS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcgcacgcttgtaacttgttggcaccggtgggtttttattttctcactccag
cagtttttatttgccccatgggctcattctgaggggaacactgtgagatatcagaccaaa
gaggaggacgcacctggcacggtcataggaaacctggccaaggacatgtccttgactccg
tctcattcctccaagatcaatttcaggatgatgaaacaattcaacgattcgtttgtcaga
gtgagagaaagcgacggggaactcactgtcggggaacgaattgacagagagagaatctgc
agacacactccacagtgtctgattacttttgacgtggttaatttctccaaagatcgctac
aaattgattcacgttgaggtggaaattaaggacgtcaatgacaactctccggagtttcca
agcaaggaatctatagtggaaatctccgagaatgcagcagttggatcgcgcatcccctta
gaccccgccgtggatgctgatgtcggctccaattacatacaaagctatcaaatttctgtt
aacggtcatttcaccattgatgtgctcctgagagcggatggggttaaatatgcggaattg
gttttaatgaaagagctagacagggagattcagtcatcatataatgtggaactggttgcc
acggatgggggaaatccacacagatccgggtcaacaaagataactgtcaaagtgactgac
ttcaatgacaatagtcccgtttttgaccagaatagtttctctgtcagtttgccagaggac
gcaccggttggcactatcatcctggacttgcacgcagttgacacggacgagggtttaaac
ggagaggtcgtgtacggcttcggaaaacaggtctctcacgagatccgagaacttttccga
gtggatggtaaatccggtcgtctgaccctcaggagtcccctggattttgaggacaaacgc
acctacgagctggacgtgcaggcgaccgatctgggacccaatcccaccccctccgtgtgc
aaaatcataattcacgtcacggacgttaatgacaatcccccagaaatcagcatcaccccg
atgacctccatcacgacgggtatcgcgtacatcagcgaggctgcagacagggacagtctg
gtggcgctgatcagcaccttggacagagactccggcgtcaacagccaggtccactgcacc
ctgtacggacacgaccacttcaaactcagacaggcccacgaagacagctacatgatcgtc
acggcggcggttctagacagggagaggattagtgagtataacctgacggtcatggcagag
gattttgggtcacctccgatgaggaaaatcacccagtacaccatcagactgagcgacgag
aacgacaacgccccccactttgccaaagccgtgtatgaagtttcggtggtggaaaacaac
gccccgggggcttacatcaccacagtggaggccagcgacgtggatctgggcaacaatggg
aaaatcacttacagactggtggacagtgtcataatgggatccccagttaacacatttgtg
tctattaattcagtgtctggctccatttatgccctgagaagttttaactatgaagtgatg
aaacagctagacatacacatccaggccagcgatggggggtcaccacagctgcagagcacg
gctatcgtcagattaaaaatagttgatcagaatgacaaccagccttctataattgcgcct
cccctttataagggttctgcagaggttttccttcccaaagatgcacctgcaggttatgtg
gtaacccagataaaggccacagatgctgatgatggaataaatgcacagctgtcctacaaa
atcaccgaagggggacacctgggtttctctatcaacaaagacacggggaagatgcatgtg
agtcgacagctcacatatgatctttcagacaatgtcaaagtcactgtgtcggtcagtgat
aatggatccccctcgctcaccgccacagctgagatacttttcagttttatagaaggtact
ttacctagtttgccttccttgccacaaaatggcagtgaggagctctttgaatgggacaca
tccatggctataatcatcatcctggcagggagctgctctcttctcctcttagctatcatt
cttatcacaaccatttgcagccgccggaaaaaagagacaagggaaggggggtttgacggt
aaagaagacataccagatgtggagaaagtggaaagcggtcatattgattcattgattgcc
agccacaaaggcaaagcgtttgatagccgtccatttccagaggatcctccactggccagc
agcaacacagcagagccagactgtgaggatggcagacagacagcaggcatgtttgagtcc
aacagcaggacaatggaggggaaattaaagggttattctacactaccgggatacgggaag
gaaaccgtcagacctataacaatatggaagggcaattcattcaccacaatctcagcaaga
gagccccacttcagtggcaaggacagtgggaaaggggacagcgacttcaatgacagcgat
tctgacatcagtggagatgtacacaaaaaagagtctccaccagtgaacagtctctgggca
tgtacaagtgagtgcaaagtgttgggacactccgaccggtgctggagcccttcagccaca
aggcccaacaccagtctggcctctggaccgcatttgtcaacgttttccaaaacagcaacg
cttccccgggatgctagaagggaaaactactacccggctctccccaaaacaagcggtctg
caaagcgtgtatgaaaaagttcaaacccaggaatttgattacatacttgttggtccacca
acaccagccagaatacaggagacagatgaaatatccatcccagagtacacaaactcttaa
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