Cololabis saira (Pacific saury): 133446427
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Entry
133446427 CDS
T09849
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446427 (sox21b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133446427 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133446427
NCBI-ProteinID:
XP_061580433
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Position
6:complement(17513382..17515655)
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AA seq
246 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVGGLSAGVLSESM
LGNPDKAAAAAAAAAARVFFNPSMTTNPYSFFDLGSKMSELSPPSFSYASPLGYPPGGAT
AFGTGAGAGAHAHTHSHPSPGNPGYMIPCNCSAWPSAGLQPPLAYILLPGMGKPQLEPYP
AYAAAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagccaatggatcacgtcaaacggccgatgaacgcgttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaacccgaagatgcacaactccgagatcagcaag
cgcctgggagcggagtggaaacttctcaccgagtccgagaaaaggccgttcatcgacgaa
gccaagaggctgcgagcgatgcacatgaaggagcaccccgactacaaatacagaccgagg
cggaagcccaagactctgatgaagaaagacaagttttccttccccgtgccgtacaacctc
ggggagcacgacgcactcaaagttggcggactgtccgccggagtgctttccgagtccatg
ctggggaacccggacaaggctgcggccgccgccgccgccgcggctgcgcgcgtcttcttc
aacccgtccatgaccacgaacccctactcctttttcgacctgggatccaagatgagcgag
ctttcccccccctcgttttcctacgcgtccccgctgggctacccgccgggaggcgctacg
gcttttggcaccggcgccggcgccggggcgcacgcacacacgcactcgcacccgagcccg
ggcaacccgggctacatgatcccgtgtaactgttcggcctggccgtcagccgggctgcag
ccgccgctggcctacatcctgctgcccgggatgggcaaacctcaacttgaaccgtaccct
gcatacgccgcggcgttatga
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integrated database retrieval system
