Cololabis saira (Pacific saury): 133446657
Help
Entry
133446657 CDS
T09849
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133446657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133446657
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133446657
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133446657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-B_box
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
AT_hook
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133446657
NCBI-ProteinID:
XP_061580673
LinkDB
All DBs
Position
1:46754676..46770526
Genome browser
AA seq
674 aa
AA seq
DB search
MADGGECDFSLMSLEDELTCSICLSTFDCPVTIPCGHNFCQDCLLATWKDSYTCPQCRTV
FATKPELKKNTVLSTVVQTFNLRSNKSPAAGPLVEETQPREKDVIRCDNCMEAEAAQTCL
TCMASFCEQHLRPHRDNPIFRVHQLSPPIGDLMERICSDHHKLMEHFCTQHDRMICSQCL
QQVHKGCSFTSPEAHRATKETDLKSKMGMLDGKIAKNTNIISQMTDVQDKLKSSAAIRKK
ALAAEYQQMRDMLAREEHDALTAVDREVVTGDTKLRGLIKKFTENITNMTKAKDDIRNLL
SCSQTAAFLQTSFNVPQAATFEPYCPRVSLDSKKVLATEAFAAELKKTLAEYFEQPVEAR
LPLHKPPTPTYTPTYNPATYTPTYNPTFAPGQMAGFNPHFIPLIPKINEQAPIKLPRSHS
PGPAQKAVQKKKPQKTKKAPEDSLGNKSLAKSMESLLEFGDKDKPRGRPPKTEGKETTET
SEMTKDISSAEKRSELMKFGTVLTFDPRTAHKRIALTEDFTKASVSDEHTNYADCHQRFS
VCSQVLGSKGFSRGRHYWEVRMSSNNFMGIGLAYNSIDRKGPSSRLGRNALSWCVEWFNV
KLSAWHNSTETVLNNPDPKRVGVLLDCEEGKVTFFNVADRAYPFYSFPFSFVEAVYPAFW
IFSSGSYVSLCKLQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggggaatgtgacttctccctgatgagtctggaggatgagctgacctgc
agcatctgtctcagtaccttcgactgtccggtcaccatcccctgcggacacaacttctgc
caggactgcctgctggccacctggaaggattcctacacctgtccccagtgcaggaccgtg
ttcgccaccaagccggagctgaagaaaaacacggtcctcagcaccgtggtccagaccttt
aacctgaggtccaacaagagccccgccgccggtccgcttgtggaggagacccagccccgg
gagaaggatgtgatccgctgcgacaactgcatggaggcggaggcggcgcagacctgcctc
acctgcatggcctctttctgcgagcagcacctgcggccgcaccgggacaaccccatcttc
cgggtccaccagctgagcccgcccatcggggacctgatggagcgcatctgctccgaccac
cacaagctgatggagcacttctgcacccagcacgaccgcatgatctgcagccaatgcctc
cagcaggtccacaaaggatgctccttcacctccccggaggcccacagggccaccaaagaa
actgacctgaaatccaagatgggtatgctggatggaaagatagccaagaataccaacatt
atttctcaaatgaccgacgtgcaggacaagctgaagtcttctgccgccatcaggaagaaa
gctctggcagccgagtatcagcagatgagggacatgttggccagagaggagcatgatgct
ctgactgcagtggaccgagaggtggtgaccggcgacaccaaactcagaggtctcatcaag
aagttcacggagaacattaccaacatgaccaaagctaaagacgatatccgcaatctgctg
agttgttcccagaccgcagccttcctgcagacgtcgttcaacgttccccaagctgcaacc
tttgaaccctactgtcctcgggtcagtctggactccaagaaagtgttggcaacagaggcc
tttgctgctgagctgaagaagacgctggcagagtactttgagcagccggtcgaggccaga
ctgcccctgcacaaaccacccacgcccacttacactcccacttacaatcccgccacttac
actcccacttacaatcccacttttgcacctggtcaaatggcaggttttaacccacatttt
atacctttaatcccaaaaataaatgagcaagcccctatcaaattacccaggtcccacagt
cccggtcctgcccagaaggcagtccaaaagaagaaacctcagaaaaccaaaaaggcccct
gaagacagtttggggaataagagtctggccaagtccatggagtccctccttgagtttggt
gacaaagacaaacccagaggacgtcctccaaagactgaaggcaaagaaacgacagagact
tcagaaatgaccaaagacataagttctgctgagaaaagaagtgagcttatgaagtttggc
acggtgctcacctttgatccgagaacagcccacaaacgcatcgcgctaaccgaggacttc
accaaggcctccgtgtcagacgagcacacgaactacgccgactgccaccagcgcttttcc
gtgtgctcccaagtgctgggctccaagggcttctccaggggacgccattactgggaggtc
cgaatgagcagcaacaacttcatggggatcggcttggcctacaacagcatcgaccgcaaa
ggcccgtccagccgactgggccgcaacgctctgtcctggtgcgtcgagtggttcaatgtg
aagctgtccgcctggcacaacagcactgagacggtgctgaataaccctgatccgaagcgc
gtaggcgtcctgctggactgtgaggaggggaaggttacgttcttcaacgtggcagacagg
gcatatcccttctactccttccccttctccttcgtcgaggccgtctatccggccttctgg
attttctccagtggctcctacgtttctctgtgcaagctgcagtag
DBGET
integrated database retrieval system
