Cololabis saira (Pacific saury): 133446709
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Entry
133446709 CDS
T09849
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai02010
ABC transporters
csai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133446709
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133446709
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133446709
Transporters [BR:
csai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133446709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
133446709
NCBI-ProteinID:
XP_061580685
LinkDB
All DBs
Position
7:complement(774511..893076)
Genome browser
AA seq
2330 aa
AA seq
DB search
MNVSTQLGLLLWKNLTYRRRQRLQLLVEIVWPLFIFFILIAVRLHYPPYEQHECHFPNKA
LPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNHSIISRLFSDAKRILLYSQNDQ
NLQGFKDLIQALKVLEESRSGFKLKHFLRDNETLSEFLTRNVSFSEPSARQIREADIDLE
KVLLRGLGVHLRDMCPRKGGRQNLTDFVRIRDQQVSARVQEVLCQAPVLWLDRAEEHFRD
NLDFFKPVRRDVRSDPEAVRQVATATNNLLDSLGSLAVELASMKSWVDLRREIRFLTRDA
ASSPASMYQAVSRIACGHPEGGGLKIKSLNWYEDSNYKALFGGSGNASEDASYDNSSTPY
CNSLVKKLDSNPTSRMIWTALKPLLLGQILYTPHTPATARVVHEVNRTFQELAVFRDLGG
MWEEVRPRVWDFLESSPEMDLVRSLLRNNATAAFFRGRLAGTDWTVPDLEHFLSKNRRDQ
NPDRGPRDQRGNRRVTWREVFNETDQAIMSISRFMECVNLDKLQPVSSEEQLVNRSLVLL
EDRRFWAGIVFPDLDPNRNPDLDPNATELPPRLRYKIRMDIDNVERTNKIQDAYWDPGPR
ADPFEDMRYIWGGFSYLQDAVEQGIIRAVTGTRERTGVYLQQMPYPCYVDDIFLRVMSRS
MPLFMTLAWMYSVSLILKGVVYEKEARLKETMRIMGLDNGILWLSWFLSSLIPLLVSAAL
LVLVLKMGNLLPYSDPGVVFLFLASYAVVTIMQCFLLSTAFSRANLAAACGGIIYFTLYL
PYVLCVAWTDYIGYGAKVFASLLSPVAFGFGCEYFSLFEEQGVGIQWSNLVSSPVQEDDF
SLRSAIVLMYVDSVLYGVLTWYLEAVFPGQYGIPRPWYFLFTKSYWTGEKDGSGKVPLRR
GTTSEVLMEEEPAHLDPGVYIQDLVKVYRHGRKLAVDGLTLGFYEGQITSFLGHNGAGKT
TTMSILTGLLPPTSGTAFILGRDIRTELSAVRQSLGVCPQHNVLFSMLTVEEHIWFYGRL
KGLSESQVQAEIRVILRDTGLPHKRGCRTSFLSGGMQRKLSVALAFVGGAKVVILDEPTA
GVDPYARRGIWDLLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQ
LGTGYYLTLVKKDPEPSLGSRRNSASTISFKKEDERTSVSSSDAGLGSEHESEAFPTETG
AGSASPGAGPAPSCGPAPSLPCDSAQVSAVILRHVPAARLVEDQGHELTYVLPYGAAKDG
AFVELFQDLDLKLLELGVSSYGVSDTSLEEIFLKVAEDNGVDTEVPSDGTLPVPRRRRTH
AFGGGDAQSCLRPLTEDEANDSDGDPDLREAELLTSTGKGSHQVSGWSLRRQQFVALMWK
RFLYARRSRKGFFAQIVLPAVFICIALVFSLIVPPFGKYPDLELQPWMYQDQVTFFSDDA
PGDATVQRLLDALLDPPGLGTRCMDGHQIPEAPCTMGDEDWLHPPVPEDVAALFRSGNWT
MENPSPACFCTCNGRKRMLPECPAGAGGPPPPEMKLSSSDTLQNLTGRNISDYLVKTYAE
IIGKSLKNKVWVNEFRYGGFSLGARSSQVLPPANEVDDAIERIRKIFELQKGNAADRFLD
NLSRFINGLDTKNNVKIWFNNKGWHSVSSFTNVMSNGILRANLPPGLDPNQYGISAVNHP
LNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERRSKAKHMHFISGVQP
LLYWGANFCWDMCNYFVPATLVILIFICFQQKAYVSSTNLPALALLLLLYGWSITPLMYP
ASFLFSVPSTAYVVLTSVNILIGINGSISTFVMELFGGNEIGGINDILKNVLLIFPHFCL
GRGLIDMVKNQAMSDALERFGESRFRSPLHWDMVGKNLFFMALEGIVFFIITVLIQYRFC
IRPRSVTKPTKPKPSLGDEDEDVARERQRIVHGLGRGDILELRGLTKVFQRKQKPAVDQL
CVGIPPGECFGLLGVNGAGKTTTFKMLTGDTLVTSGEAFLAGKSILREMDQVHQNMGYCP
QFDAVNELLTGREHLELYAVLRGVPEGEVCDVAEWGIRKLSLLKYADKRAGSYSGGNLRK
LSTALALMGAPPVVFLDEPTTGMDPKARRSLWNCIHSVIKEGRSVVLTSHSMEECEALCT
RMAIMVNGRFRCLGSVQHLKSRFGDGYTIVLRVAGPEPGSDPDLVPVQKFIESRLSGAVL
KEKHRNLLQYQLPSARPGLTHIFSTLARNKELLKIEDYSVTQTTLDQVFVNFAKDQSDDY
VSKDASVRRKDVSVRRKDVATVDMAALGSAHGGGACGGGACGGGASESVM
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctctactcagctgggactgttgctgtggaagaacctgacgtaccggcgccgc
caacggctgcagctactggtggagatcgtctggccgctcttcatcttcttcatcctcatc
gccgtgcgtttgcactacccgccctacgagcagcatgagtgccacttccccaacaaggcc
ctgccgtcggccgggacgctgccgtggatccagggcatcctgtgcaacgccaacaacccg
tgcttccggaacccgacgccgggggagtctccgggcgtggtgggaaacttcaaccactcc
ataatctcccgtctgttctcggacgccaagcggatcctgctgtactcccagaacgaccag
aacctgcagggcttcaaggacctgatccaggccctgaaggtcctggaagagagccgctca
gggttcaagctgaagcacttcctgcgagacaacgagactctgtcggagttcctgacccgg
aacgtttccttctccgaaccctcggcccggcagatcagggaggccgacatcgacctggag
aaggttctcctcagggggctgggggtccacctgagggacatgtgtccccggaaggggggc
cggcagaacctgacggacttcgtgaggatccgggaccagcaggtgtcggcccgggtgcag
gaggttctgtgtcaggccccggtgctgtggctggaccgggccgaggagcatttcagggac
aacctggacttcttcaagccggtccggagggacgtccgctccgaccccgaggccgtcaga
caggtcgccacggcaaccaacaacctgctggacagtctgggctcactggctgtggagctg
gcctccatgaagagctgggtggacctgcggagggagatccggttcctgacccgggacgcc
gcctcgtccccggcctccatgtaccaggccgtgtcccggatcgcctgtggacacccggag
ggcggcgggctgaagatcaagtccctcaactggtacgaggactccaactacaaggccctg
ttcggggggagcggcaacgctagcgaggacgctagctacgacaactcctccaccccgtac
tgcaacagcctggtgaagaagctggactccaacccgacgtcccggatgatctggacggcg
ctgaagccgctgctgctgggccagatcctgtacacgccccacactccggccacggcccgg
gtcgtccacgaggtgaaccggaccttccaggaactggccgtgttccgggatcttggcggg
atgtgggaggaagttcgtccccgagtctgggacttcctggagagcagcccggagatggac
ctggtccggagcctgctgaggaacaacgccacggccgctttcttccggggccggcttgcc
ggcaccgactggaccgtcccggacctggagcacttcctgtccaagaaccggagggaccag
aacccggacaggggtccccgggaccagagggggaaccggcgcgtcacctggagggaagtt
ttcaacgagacggaccaggccatcatgagcatctcccgcttcatggagtgcgtgaacttg
gacaagctccaacccgtgtccagcgaggagcagctggtgaaccggtccctggtcctgctg
gaggaccggcggttctgggccgggatcgtgttcccggacctggacccgaaccggaacccg
gacctggaccccaacgctaccgagctgccgccgcggctacgctacaagatccgaatggac
atcgacaacgtggagcggaccaacaagatccaggacgcgtactgggacccgggtccgcgg
gccgacccgttcgaggacatgcgctacatctggggcgggttctcgtacctgcaggacgcc
gtggagcaaggaatcatccgggccgttaccggcacccgggagaggaccggagtctacctg
cagcagatgccgtacccctgctacgtagacgacatcttcctgcgggtgatgagccgctcc
atgccgctcttcatgacgctagcgtggatgtactcggtgtctctgatcctgaagggcgtg
gtctacgagaaggaggcgcggctgaaggaaaccatgaggatcatgggattggacaacggg
atcctgtggctcagctggttcctcagcagcctgatcccgctgctggtcagcgccgcgctg
ctggtgctggtgctcaagatggggaacctgcttccctacagcgaccccggcgtggttttc
ctgttcctggcgtcgtacgccgtcgtcaccatcatgcagtgtttcctgctcagcacggcc
ttctcgcgcgctaacctagcggcggcgtgcggcggcatcatctacttcacgctctacctg
ccctacgtgctctgtgtggcctggacggattacatcggttacggagccaaggtgttcgcg
agcctgctgtcccccgtggcgttcgggttcgggtgcgagtacttctccctgttcgaggag
cagggcgtggggatccagtggtccaacctggtgtccagcccggtccaggaggacgacttc
agtctccgctccgctatcgtgctgatgtacgtggactcggtcctgtacggagtcctgacc
tggtacctggaggccgtgttccccggtcagtacgggatcccgcggccctggtacttcctg
ttcaccaagtcctactggaccggagagaaggacggatccgggaaagtcccgctgaggaga
ggaaccacgtcagaggtcctgatggaggaggagccggcccacctggacccgggcgtttac
atccaggacctggtcaaggtttaccgacacggcaggaagttagcggtggacggactgacg
ctcggattctacgagggacagatcacgtccttcctgggacacaacggggccggcaagacc
accaccatgtccatcctaacgggtctcctccccccgacctccggaaccgccttcatcctg
ggccgagacatccggactgaactcagcgccgtcagacaaagtctgggagtctgtccccaa
cacaacgtcctgttcagcatgctgacggtggaggagcacatctggttctacgggcgtctg
aagggtttgtcggagtcgcaggtccaggcggagatccgggtgatcctgcgcgacaccggc
ctcccgcacaagcgcggctgccggaccagcttcctgtcgggggggatgcagcgcaagcta
tcggtggcgctagccttcgtgggcggagccaaggtggtgattctggacgagcccacggcc
ggggtcgacccgtacgctaggagaggaatctgggacctgctgctcaagtaccgccaaggc
cggaccatcatcctgtccacgcaccacatggacgaggccgacatcctgggcgaccgcatc
gccatcatctcccacgggaagctttgctgcgtcggctcctcgctgttcctgaagacccag
ctgggaaccggctactacctgacgctcgtcaagaaggacccggagccctcgctggggtcg
cgcaggaactccgctagcaccatctccttcaagaaggaggacgagcggacgtccgtcagc
agcagcgacgccggtttgggcagcgaacatgaaagtgaagcgtttccaaccgagaccgga
gcaggctccgcctccccgggtgcaggccccgccccctcctgtggccccgccccctccctc
ccctgtgactccgcccaggtgtcggcggtgatcctgcgtcacgtcccggcggcgcggctg
gtggaggatcagggccacgagctaacgtacgtgctgccgtacggcgccgctaaagacgga
gccttcgtggaacttttccaggatctggacctgaagctgctggagctcggagtctccagc
tacggagtctccgacacctcgctggaggagatcttcctgaaagttgccgaggacaacgga
gtcgacaccgaagttccctcagacgggacacttcctgtcccgcggcggcgcaggactcac
gccttcgggggcggagacgcccagagctgcctgaggccgctgacggaggacgaggctaac
gactcggacggggatccagacctgcgggaggcggagctcctcacctccacaggtaaaggc
tcccaccaggtgagtgggtggagcctgcggcggcagcagttcgtggctctgatgtggaag
cgtttcctgtacgcgcggcgctcgcgcaagggcttcttcgcccagatcgtgctgccggcc
gtcttcatctgcatcgcgctcgtcttcagcctcatcgttccgccgttcgggaaatacccg
gatctggagctgcagccgtggatgtaccaggaccaggtcaccttcttcagtgacgacgcc
cccggagacgccacggtgcagcggctgctggacgccctgctggacccgccaggactgggg
acccgctgcatggacggacaccagatcccggaggccccctgcaccatgggggacgaggac
tggctccacccccccgtcccggaggacgtggccgccctgttccgctccgggaactggacc
atggagaacccgtcccccgcctgtttctgcacctgcaacggccggaagaggatgctgccg
gagtgtccggcgggggccgggggcccgcccccccccgagatgaagctcagttcctccgat
acgctgcagaacttgacggggagaaacatctcggactacctggtgaagacgtacgcagaa
atcatcgggaagagcctgaagaacaaggtctgggtgaacgagttcaggtacggaggattc
tcattgggcgccaggagttctcaggttctccctccggccaacgaggtggacgacgccatc
gagagaatcaggaagatctttgagctgcagaagggaaacgccgctgaccggttcctggac
aacttgtctcgcttcatcaacggcctggacaccaagaacaacgtgaagatctggttcaac
aacaagggctggcacagcgtgtcgtcgttcaccaacgtgatgagcaacggcatcctgaga
gccaacctgccgccgggcctggaccccaaccagtacggcatcagcgctgtcaatcacccg
ctcaacctgaccaaggagcagctgtcgcaggtggccctggtcacgacctcggtggacgtg
ctcgtctccatctgcgtgatcttcgccatgtccttcgtccccgccagcttcgtggttttc
ctgatccaggagagacggagcaaagccaagcacatgcacttcatcagcggagtgcagccg
ctgctgtactggggggccaacttctgctgggacatgtgtaactactttgtcccggcgacg
ctcgtcatcctcatcttcatctgcttccaacaaaaggcctacgtttcctccaccaacctg
ccggcgctggcgctgctgctgctgctctacgggtggtccatcacccccctcatgtacccg
gcctccttcctgttctccgtcccgtctacggcctacgtggttctgaccagcgtcaacatc
ctgatcgggatcaacgggagtatttccacgtttgtgatggagctgttcggggggaacgag
atcggtggtattaacgatattctgaagaacgtgctgctaatcttccctcacttctgtctg
ggccgaggattaatagacatggtgaagaaccaggccatgtccgacgccctggaacgcttt
ggggagagccggttccggtccccgctccactgggacatggtggggaagaacttgttcttc
atggctctggaaggaatcgtcttcttcatcatcaccgtcctgatccagtaccggttctgc
atccggcccaggtccgtcaccaaacccaccaaacctaaaccgtcgttgggggacgaggac
gaggacgtggcccgggagagacagaggatcgtccacggactcgggagaggagacatcctg
gagctgagggggctgaccaaggtgttccagaggaagcagaaaccggccgtggaccagctc
tgtgtggggatcccccctggagagtgcttcgggctcctcggcgtcaacggcgccggaaag
acgacgaccttcaagatgctaacgggagacacgctagtgactagcggagaggccttcctg
gccgggaagagcatcctccgggagatggaccaggtccaccagaacatgggctactgtcct
cagtttgacgccgtcaacgagctgctgacggggagagaacacctggagctgtacgcggtc
ctgaggggagtccccgagggggaggtctgtgacgtggcggagtggggcatcaggaaactg
agtttactaaaatacgcggataaacgagcaggaagttacagcggaggaaacctgaggaaa
ctgtccacggccctggccctgatgggagctccgcccgtcgtcttcctggatgaacccacc
acggggatggatcccaaagctcgtcggtctctctggaactgcatccacagcgtcatcaag
gagggaagatccgtggtgctgacatcacacagcatggaggagtgtgaggctctctgcacc
cgtatggccatcatggtgaacggaagattccgctgtctcggcagcgtccagcacctgaag
agcaggttcggcgacggctacaccatcgtgctgcgcgtggccggtccagagccgggctcg
gacccggacctggtcccggtccagaagttcatcgagagccggctcagcggagccgtcctg
aaggagaagcaccggaacctcctgcagtaccagctgccgtcggcccggcccggcctcacc
cacatcttctccacgctggcccggaacaaggagctgctgaagatagaggactactcggtc
acgcagaccacgctggaccaggtgttcgtgaactttgcgaaggaccagagcgacgactac
gtctccaaggacgctagcgtgcggcggaaggacgttagcgtgcggcggaaggacgtcgcc
accgtggacatggcggcgctaggctccgcccacgggggcggggcctgcgggggcggagcc
tgcgggggcggagccagcgagagcgtcatgtga
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integrated database retrieval system
