Cololabis saira (Pacific saury): 133446711
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Entry
133446711 CDS
T09849
Symbol
tbc1d2
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133446711 (tbc1d2)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133446711 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
TMF_DNA_bd
PH_3
PH_alsin
Motif
Other DBs
NCBI-GeneID:
133446711
NCBI-ProteinID:
XP_061580692
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All DBs
Position
7:complement(1054896..1083658)
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AA seq
1074 aa
AA seq
DB search
MEAAGSPIAASSGLLPVQPEPDTSPGKPEPEPDTGPERPEPDTGPEIPEPDTGPEIPEPD
TGPEIPEPDTGPGRPDQTNLEPSKPPEPQAPSGSVCRDQKELAGPPGPEPFCGSGPSPVP
GTGPAPGPRLCGFLQKQGGPLRAWKRRWFSYEENQNQLFYFRTPQDVEPLGRVELSAASF
SYPLGAEPGTFHVQTPERTFVLKAVTRELMLYWLQQLQVKRWQHRRTDTCIGHAPDTCTG
HAPDTCTGHAPDTCSSTGDFLLTMETPLGLVGEGAASAPPRGGGGLANMSIKHPLIHIQN
SVHSLKKRRSVFPAETPPRTPPRTPPPSRPAEAPPPPLPLADPAEGGASPLSGRRTKTRR
SSVTPEQEKLMLVEEVKAQKELVLILHRALEAAQLEKRSCAEFLAEDGEQRRLELLRHGQ
RQAANAQQRLEDAAVEAANAQRRLEDAAAEAGLLRAGLADRDARLADRDARLARLQEEVR
DLRDQNQAQQQVIQKLSDQVTSGLSEPVRSPVPTRSPARSPLPTRSPARSPLPTRSRSPV
GSGLPDLQVAPAAGGRPEGDVSGLWCWYRDQELGSGSGSGSETLVLRRGTSPGSGSVLQD
DLEAYQTQNRFLNSEIFQLTRLWRKSSETEKSLMVKCSHLESSLCQVESRYLGVLRKLQE
DKSLDRSQQEAVQRTIEDVLGGTMETGVPPKTAVPLDHDQYGFKILPDYEVEDMKLLAKI
QALEIRSHNLRLQQGPERPLLARWARFLAGRSDQDLSPSPELKALLRGGVPPEYRPRIWR
WLVRTRTRTLRERHPQRYQQLCEQTRSSLHPASHQIQLDLHRTLTTNQHFSSPSSPALQQ
LRRVLLAFSWHNAAVGYCQGLNRLAALALLVLQDEEDSFWLLVAVVEALLPPGYYAPPLL
GAQADQRVLKDLLEEKLPRLAAHLQARDVDVTLVSLGWFLVVFVENLASDLLLPLWDAFL
YEGSKVLFRYALAIFKYKQDELLRLSDGVEIYQYLRCCTRTISDGRKLAAIAFGDMNPFP
RRLLRTRRTAHLQVLQAELQVQEEQQKELGLDLDLDLDLDKDLGTGASEDDDDL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcaggaagtcccatcgccgcctcgtctggcttacttcctgtccaaccagaa
ccagataccagtccaggaaaaccagaaccagaaccagataccggtccagaaagaccagaa
ccagataccggtccagaaataccagaaccagataccggtccagaaataccagaaccagat
accggtccagaaataccagaaccagataccggtccaggaagaccagaccaaacaaacctg
gagccctctaaacctccagaacctcaagctccttcagggtccgtttgtagggatcagaag
gagctagctggtcctcctggaccagaaccattctgtggttctggacccagtcctgtacct
ggtaccggtcccgctcccggacccagactgtgtgggttcctgcagaagcaaggggggccc
ctgagggcatggaagcggcgctggttcagctacgaggagaaccagaaccagctgttctac
ttccggacgccgcaggacgtggagccgctgggccgggtggagctcagcgccgccagcttc
agctacccgttgggggccgaacccggaaccttccacgtccagacccccgaacgcaccttc
gtcctcaaggccgtgacccgggaactgatgctctactggctgcagcagctgcaggtgaag
cgctggcagcaccgacggaccgacacctgcataggccacgcccccgacacctgcacaggc
cacgcccccgacacctgcacaggccacgcccccgacacctgcagcagcacaggagacttc
ctgctgacgatggagactcccctgggcctggtgggggagggggcggccagcgcccccccc
cgggggggagggggcctcgccaacatgtccatcaagcacccgctcatccacatccaaaac
tcggtccacagcctgaagaagaggcggagcgtctttcctgcagagaccccgccccggact
ccaccccggaccccgcctccatcccgcccagcagaagccccgccccctcctctcccattg
gccgatccggcggagggcggggcgtcgccgctgagcggcaggaggaccaagacccgccgc
tcgtccgtgacgccagagcaggagaagctcatgctggtggaggaggtgaaggctcagaag
gagctggtcctgatcctccacagggccctggaagcagctcagctggagaaaaggtcgtgc
gccgagttcctggcggaggacggcgagcagcggcgcctggagctgctgcgccacggccag
cgccaggcggctaacgcccagcagcgcctggaggacgccgccgtggaggcggctaacgct
cagcggcgcctggaggacgccgccgcggaggcggggctactgagggcggggctggccgac
cgggacgcccggctggccgaccgggacgcccggctggcccggctgcaggaggaggtccgg
gatctccgggaccagaaccaggcccagcagcaggtgatccagaagctgtccgaccaggtg
acctccggtctgtccgagccagtccggtcccccgtaccgacccggtctccggcccggtcc
cccttaccgacccggtctccggcccggtcccccttaccgacccggtctcggtctccggtg
gggtccggactcccagacctccaggtggctccagcagcaggtggacgacctgaaggtgac
gtatccggactctggtgttggtaccgggaccaggagttgggttctggttctggttctggt
tctgagactctggttctgagacggggtaccagtccaggttctggttctgtgttgcaggac
gacttggaggcgtaccagacccagaaccggttcctgaactctgagatcttccagctgacc
cgcctgtggaggaaaagctcggagacggagaagagtctgatggtgaagtgctcccacctg
gagtcctccctctgccaggtggagagccgctacctgggcgtcctgcggaagctgcaggag
gacaaatctctggaccggagccagcaggaggccgtccagaggaccatcgaggacgttcta
ggggggacgatggagacgggggtcccgccaaagaccgccgtcccgctggaccacgaccag
tacgggttcaagatcctgccggactatgaggtggaggacatgaagctgctggccaagatc
caggcgctggaaatccggtcgcacaacctccggctgcagcaaggaccggagcgccccctg
ctggcccgctgggcccggttcctggccggccgctcggaccaggacctgagtccgtccccg
gagctgaaggccctgctgagggggggcgtcccgccggagtaccggccccggatctggcgc
tggctggtccggaccaggaccaggaccctgagggagcggcacccgcagcgctaccagcag
ttgtgtgaacagactcggtcatccctccatccagcctcccatcagatccagctggacctg
catcgaaccctgacgaccaatcagcacttctcctccccgtcaagccccgccctccagcag
ctgcgccgcgtgctgctagcctttagctggcacaacgccgccgtgggctactgccagggc
ctcaacaggctggcggccctggccctgctggtcctgcaggacgaggaggattccttctgg
ctgctggtggcggtggtggaggccctgctgcccccgggctactacgccccccccctgctg
ggggcccaggcggaccagcgggtgctcaaggacctgctggaggagaagctgccccggctg
gcggcgcacctgcaggcgcgggacgtggacgtgacgctggtctcgctcggctggttcctg
gtcgtcttcgtggagaatctggcatcggacctgctgctgccgctgtgggacgccttcctg
tacgagggcagcaaggtcttgttccgctacgctctggccatcttcaagtacaagcaggac
gagctcctgcgactcagcgacggcgtggagatctaccagtacctgcgctgctgcaccagg
accatctccgacggcaggaagctggcggccatcgccttcggggacatgaacccgttcccg
cggcgcctgctgaggacccggcggacggcgcacctgcaggtgctgcaggccgagctgcag
gtgcaggaggagcagcagaaggagctgggtctggacctggacctggacctggacctggac
aaggacctggggacgggggccagcgaggacgacgacgacctctga
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