Cololabis saira (Pacific saury): 133446747
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Entry
133446747 CDS
T09849
Name
(RefSeq) high affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133446747
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133446747
Transporters [BR:
csai02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
133446747
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
133446747
NCBI-ProteinID:
XP_061580772
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Position
1:47859842..47883258
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AA seq
552 aa
AA seq
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MTVNVLGLVVMAGFYVVILGTGIWASMRSRKEEKKWTGDGMEITLLAGRNINLLVGIFTL
TATWVGGGFILGIAEATYNPTLGAVWALMPVPYVLTFFLGGFFFAKPMRENNYVTMMDPF
QKKYGNFMSSALIFPALVADVLWVARTLVSLGGTMSVILDLPYIYSIIISSVVAIIYTLL
GGLYSVAYTDVIQLILIFISLWVCVPFMMTNPHSLDISLTAYNETFQAPWVGTVELDEAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCFASSAFCLVLGIPSVLIGAVAAST
DWNSTAYGLPTPYDRKEAGSILPIALQYLTPTYISVVGIGAVAAAVMSSMDSALLSSASL
FSSNIYKNILRKQASDREMQWVIRISVVVVGLAGTALTFLDNSVLVFWIVGVDMSYTIMF
PQLVCVLFFKVSNGYGAIIGYTIGLVTRILSGEPLLGLPPIIKFPGCRLDDEGKLTQFFP
FRTVIMLMSLLSILLFSWLASIIFNKGLVSDKWDVFDAKRKYKPAATAENIKVSPTSEGA
PASKQLLDTTSC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaatgtgctgggtctggtggtgatggcgggcttctacgtggtgatcttgggc
acgggcatctgggcgtcgatgcgctccaggaaagaggagaaaaaatggacaggagatggt
atggagataacactactggctgggcgaaacatcaatttacttgttggaatcttcactctt
acagctacatgggtaggcggagggttcatccttggtatagctgaagctacgtacaaccca
acactgggtgcagtgtgggcactcatgccagtgccttacgtgttgactttcttcctaggt
ggctttttctttgccaagcccatgagagagaacaactatgtcacaatgatggaccctttc
caaaagaagtatgggaatttcatgagcagtgccttgatctttccagcactggtggccgac
gtgttgtgggtggcacgcacactcgtcagcttgggtggaactatgagcgtgatcctggat
ctgccctacatctactccattatcatctcctcagtggtggccataatctacacactgctg
ggggggctctactctgtggcctacacagatgtcatccagctaattctcatctttatcagc
ctgtgggtgtgtgtccctttcatgatgaccaaccctcactccttggacatctcactgacg
gcatacaatgagaccttccaggccccctgggtgggaacggtggaactcgatgaggccggc
aaatggttcgatgacttcatgctgctggctctgggcgggttagcctaccaggcattctac
caacgaatcctgtccgcctcatcttacacccaagctcaagtgacctgtttcgcttcttca
gccttctgcctggtgctgggtatcccatctgtgctgattggtgctgtggctgcgtctaca
gactggaactcaactgcatacggactgcctactccatatgatcgtaaagaggcaggatcc
atcctccccatcgctctgcagtacctcacacccacctacatctctgtcgttggcattgga
gctgttgctgctgctgtcatgtcctccatggactcagctctgctgtcctctgcctcactg
ttctcctctaatatctacaagaatatcctcaggaagcaggcttcagaccgtgagatgcag
tgggtgatccggatctcagtggtggtggtgggtctggccggcactgctctcacgttcttg
gacaacagtgtgctggtcttctggattgtgggcgttgatatgtcctacaccatcatgttt
cctcagctagtctgcgtcctctttttcaaggtgtctaacggttatggagccattattggc
tacaccattgggctggtcacgagaatccttagtggcgagccccttcttggcctcccgcca
atcatcaagttccccggctgccggctagatgacgaaggaaagctgacccagttcttccct
ttccgtaccgtcatcatgctcatgtcgctcctatccattctgcttttttcatggctagca
tccatcattttcaacaaaggcctggtgtctgacaaatgggatgtgtttgatgccaaacgc
aagtacaaacccgcagctacagctgaaaacatcaaagtctcccccaccagtgaaggagcc
cctgcatccaagcagctgctggacaccactagctgctga
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