Cololabis saira (Pacific saury): 133446750
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Entry
133446750 CDS
T09849
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133446750
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133446750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
RA_2
cNMP_binding
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
133446750
NCBI-ProteinID:
XP_061580782
LinkDB
All DBs
Position
7:complement(10654205..10682120)
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AA seq
1402 aa
AA seq
DB search
MDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQ
LPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDSRTEV
LCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIV
MVKEHRELDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVV
GKKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEKEKMCGHLRL
LNIACAAKAKPRLVTLTKPSRDSPLAFSLLGGQEKGFRIFIDAVEPGSKAAEAGLKRGDQ
ILEVNGQNFENVQLNKAIEILKNNTHLSITVKTNLLVFKDLLTRPEHDHDLDGDEEHDRK
NGAPHLPKIGDIKKASRYSIPDLAVDVEQVMGLEKASKKAKTNTVGGRNKLKKIFDKTLT
SILPPKPYNDVCVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQ
PDMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGV
IKQRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDDDAQDLLREGQISLLQLSTVEVA
TQLSMRAFELFCAIEPTEYIDDLFKLRSKTGSASLKRFEEAINHETFWVATEVTREPNQL
KRMKTVKHFIKIALHCRECKNFSSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQD
LFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAK
EIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAMLDVSQTGGHKKRVRRSSFL
NAKKLYEDAQMARKVKQYLSNLSLETNEESLQTFSLQCEPSINTLPKNAGGKRPDTSPVV
SRAASQQRGTLAKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEGNE
RHRRQPEDTVSNASSQLSSPPTSPQSSPKKGYGRMGDAYSDSGHSEISSRSSLVSNSSFD
MAQEERRLRHSGGVGDAHIGGPRMERRATTDPDQYSLGSYSSMQDCRGIYTGCPTVLSSP
SSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGLPSG
PEALLGGHAALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPETSS
ITSTGSEEAKQLGRPSPSPITAGARKEGRYREPPPTPPGYTALTISDLPEGQHPPPSAPT
STATHSGRRPPDYTTALQRSRMVTQSPDSHQAQQAAKHRGGLHRTRSPAEEQEPEEEEEG
ESLSSKLVALRKAVAQHTSERP
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggacctcagcggcctccccgagaccgccgtcgactccgaggaggacgacgacgaggag
gacatcgagcgggcgtccgaccccctcatgagcagggacatcgtgcgggactgcctggag
aaggatcccatggacaggacggacgacgacatcgagcaattactggagttcatgcatcaa
ctgccagcgtttgctaacatgaccatgtcggtgaggagggaactctgcgctgtcatggtc
ttcgccgtggtcgagcgcgccggaaccatcgttctcaatgatggagaggagctggactcg
tggtcggtgatcctgaacgggtcggtggaggtgacgtaccccgacagccggaccgaggtg
ctgtgcatgggcaacagtttcggagtgtcacccaccatggagaaggagtacatgaaaggc
gtgatgaagaccaaggtggacgactgccagttcgtgtgtatagctcagcaggactactgc
tgcatcctgaaccaagtagagaagaacatgcagaaggtggaggaggagggagagatcgtc
atggtgaaggagcatcgtgaactggaccgaaccggcaccaggaagggacacatcgtcatc
aagggcacggcggagcgcctcaccatgcacctggtggaggagcactcggtggtggacccc
acctacatcgaggacttcctgctgacctacaggaccttcctctccagccccatggtcgtg
ggcaagaagctcctggagtggtttcacgaccccagtctcagggacaaggttacacgggta
gtcttgctgtgggtaaacaatcacttcaacgactttgagggcgaccctgccatgacccgc
tttttggaggagtttgaaaacaacctcgagaaagaaaaaatgtgcgggcacctcagactg
ttaaacatagcgtgtgctgctaaagccaagccgcggctggtgacgctaaccaagccgtcg
cgggactcccctctggcgttcagcctcctcggagggcaggagaaaggcttccgcatcttc
atcgatgccgtggagccagggagcaaggcagcagaggccggccttaagcgtggcgatcag
atcttggaggtcaatgggcagaattttgagaatgtccaactcaacaaagccattgagatc
ctaaagaacaacacccacttgtccataactgtgaagacaaatcttttagtgtttaaagac
ctgctaacgcgaccagaacacgaccacgacctggacggtgacgaggaacacgacaggaag
aacggcgctccccacctccccaagatcggggacatcaagaaggccagtcgctactccata
ccggacctggcggtggacgtggagcaggtcatgggtctggagaaggccagcaaaaaggcc
aagaccaacaccgtgggaggacgcaacaagctgaagaagatctttgacaagacgctcacc
agcatcctgccgcccaaaccttacaatgatgtttgcgttggccaatcacaggacgacagc
atagtgggaatgaagcagtccaaacagatcccaccggctctgcccgtcagcgggaacctg
tcgtcgtcaaacccagacctgctgcagtcgcaccaccgcatcctcgacttcaacaaccag
cctgatatgtcggaccaagtgttgcgagtctttaaggcggaccagcagtctcggtatatc
atgatcgggaaggacacgacggctaaagaggtggtggcccaagccatccgggagttcgcc
ctgaccgctgcccccgaggcgtactcgctgtgtgaggtgtccgtcacgccagagggcgtc
atcaaacagaggcggttgccagatcagctttccaagctcgccgacaggattcagctgagc
ggaagatactacctaaagagcaacatggagacggagacgttgtgctcggacgatgacgcc
caggatcttctccgggaaggccagatctccctgttacagctcagcacggtggaggtggcc
acgcagctttccatgcgggcctttgaacttttctgcgccatcgagcccaccgagtacatc
gacgacttgttcaagctgcgctccaagaccggctctgcgagcctcaagcgcttcgaggag
gccatcaaccacgagacgttctgggtggctacggaggtgacgcgggagcccaaccagctc
aagcgcatgaaaaccgtcaagcacttcatcaaaatagccctgcactgtcgggagtgcaag
aacttcagctccatgtttgcaatcatcagtgggctgaacttggctccggtgtccagactg
agaggaacatgggagaagttacctagcaagtatgagaagttgtttggggacctgcaggac
ctctttgatccctcgcgaaatatggcaaagtacagaaatgtcctcaacaatcagaacctc
cagccaccaatcattcccctgttccccgtcatcaagaaggacctcaccttcctacatgaa
ggcaacgactctaaggtggatggcctggttaattttgagaagctgaggatgatcgccaaa
gaaattcgtcacgtggggcgtatggcgtccgtcaacatggacccagccctcatgttccga
accaggaagaagaaatggaggagtttagggtctctaagtcagggtagcgccaacgcggcc
atgctagacgtcagccagacaggtggccacaagaagcgggtgcgacgcagctccttccta
aatgcaaaaaagctttacgaggacgcccagatggccaggaaggtcaagcagtacctgtcc
aacctcagcctggagacgaacgaagagagtctgcagaccttctcgctacagtgtgaaccc
tccatcaacacattgccgaagaacgctggtggaaagcgaccagacacgtctcccgtggtg
tcccgagctgccagccagcagaggggcacgctggccaaagggaaccaggccctgcaggtc
ccggccgtcgccctctacccgtctagaaagaaagtgccagtcaaggatctgccgcctttt
ggcaccagttcgccccagtccctgaagaagatcctgtctctgtctgaggagggaaacgaa
aggcatcgcaggcagccagaggacaccgtgtccaacgcctcctcccagctctcctcccct
cccacctccccccagagctcgcccaagaagggttacggcaggatgggggacgcctactcg
gactccgggcacagtgagatctcgtctcgctccagtctggtcagcaactcctctttcgac
atggcccaggaggagaggagactccgtcactctggaggagttggagacgctcacattggg
ggacctcggatggaaagaagagccaccaccgaccccgaccagtacagtctggggtcgtat
tcatcaatgcaggattgtcggggcatctacaccggctgccccaccgttctctcctcgccc
agttcagaagaactgactcaggatcagggcgaccgcgtctccctcgacgctgcagacagc
ggccgcggctcctggacgtcctgctcctccggttcccacgacaacatccagactatgcag
caggggcggagttgggagacgctggcctttggagggggaggcggcgggcttccttcagga
cccgaagccttactggggggtcacgcggcgctgtgggcggcgcaggccagggggagctgg
gcgtccgccagctcctcctcctcgtcagcagcgtactggggagaggactcagagggagat
accggcaccatcaagaggagagggggaaaggacgtcaacgccgacccggagacaagtagc
ataacatccaccgggtcagaggaggcgaagcagctgggccggccgtctccgtcgcccatc
actgctggagctcgtaaggagggccggtaccgcgagccccccccgaccccccccggttac
acggccctgaccatctccgacctcccggaggggcagcacccgcccccgtctgcccccacg
tccacggccacccactcgggccgccggcccccggactacaccacggccctgcagcgctcg
cgcatggtcacccagtcgcccgactcccaccaggcccagcaggcggccaagcaccggggc
ggcctccaccgcacccgctcgccggccgaggagcaggagcccgaggaagaagaggagggt
gagtccttgtcttccaaactagtggctctgaggaaggcggtggcacagcacacatctgag
aggccatga
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