KEGG   Cololabis saira (Pacific saury): 133446765
Entry
133446765         CDS       T09849                                 
Symbol
pcdh12
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:csai04515]
    133446765 (pcdh12)
Cell adhesion molecules [BR:csai04515]
 Cadherins
  Protocadherins
   133446765 (pcdh12)
Motif
Pfam: Cadherin Cadherin_2 TMEM154
Other DBs
NCBI-GeneID: 133446765
NCBI-ProteinID: XP_061580825
LinkDB
Position
7:12148046..12178694
AA seq 1173 aa
MMLLALLLVLSLCSETLSSESSSITVQYRVWEEQPAGTRVGSLVDDLRQRDEGGLLEDFQ
VVEQGKALPFSVTGRDGVVSTQGQLDREELCRGSDLCEVAFSVLYRKSGAVNCLRVRVEV
MDLNDHSPNFSSIMQEVEISETASLRMRIPLDRAVDPDAGSNGLQTYTLSHNPHFALDVM
VGPGGTKQPELVVMKELDREVQASFELTLVASDKGNPPMSGSTLVHVKIQDSNDNSPTFE
DGSPTVTLSEDTAIGTTIINLKASDPDQGANGEVEYLLSKHTRPEVQKLFHVDPQTGDVI
VKAHLDYEVAPSYEVIIQAIDRGPNAIPAHCKLHVDLIDVNDNAPRIHTTWISRSSAAAT
VLEGAEVGTFLALVVVYDADSDRNGQVSAVIKDGSGPFHLRKTHDGNYMIETSGYLDREK
VMSYNITLLAQDHGAPSLSSVKHLPVSVLDENDNVPVFSTSKYSASFKENSIVGYEVLQV
EAHDDDLEFNGRVSYFINGPTDQETRTRPFSIHQRTGVITVQHPLDYEESQTYSFTVEAV
DHGHPPLTATATVQIDVEDVNDNYPVINEPKPRKGVGYISVPVSAYKGEIVTELGNEIED
GLTTLPFNQSVRDGLSGFLASTIKAEDLDSGLNGKLQYLITDRNQHGLFWMDQDTGQLFV
NTTNATELIGRTYDMEVTISDMGTPSMATKMTLEVTFINLKDHLKNSSPGNRGQLSFTMM
MAICLGATCLLLLLAIALVTTFCRPEKRENRAYNCRQAESSYTRHPRRPQKNIRKSDIQL
IPVIRGRKEEPPEDDSEAQPLTPPSMPEDQQTERQYNFIPSIMNASFHSQSYLDGDTNPT
FTHHSKTLRKPGNIELDGSLSLTPSSSYHTLRKSRNPSSSSSSVSHSSTLKRHKLQPEGE
ETESQRSTSQTTLRRPKTADGRGAHEAERRQMLRNLVRLSMAAFGDSIELSSASPEVQQI
SQLLTLLRQGQLQPKTNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDVDWEPGR
DSPIDPQLEEGLTHLLSNPDDVFSEGSDPAWMARLSLPLAADYHDNVGGDEPPPREGLDS
SSSFSTFGKTPEKDGQLGGALLSEVSTLFEMLMTQKADAHPGPSPDILYRLSAAYRRSLG
LDAGAAATATATGSGPTNSDKRPGLAAPSGLYQ
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgatgctgctggctctgcttctggttctgagtctttgctctgagactctgtcctctgag
tcgtcatcaataaccgtccagtaccgggtttgggaggagcagcctgcgggaacccgggtc
ggcagcctggtggacgacctgcggcagagggacgaaggtggcttactggaggatttccag
gtggtggagcagggtaaggcccttcctttctccgtcaccggccgggacggggttgtctcc
acccaaggccagctggacagggaggagctgtgccgcggctcggacctgtgcgaggtggcc
ttcagcgtcctgtacaggaaaagcggcgccgtgaactgcctgcgcgttcgtgtggaggtg
atggacctgaacgaccacagtcccaatttctccagcattatgcaggaagtggagatttca
gagaccgccagcctccggatgcgtatccctttggaccgggcggttgatcccgatgcaggg
tccaatggcctccaaacgtacacactatctcacaacccacactttgccctggatgtgatg
gttggtccgggtgggaccaaacagccagagctggtggttatgaaggaactggacagggag
gttcaggcatcctttgaactcaccctggtggcgtcagataaaggaaacccaccaatgtcc
gggagcacgttagttcatgttaaaatccaggactcgaacgacaacagtcctacatttgaa
gatggcagtcccactgtgacattaagtgaggacacagccattggtacaaccatcatcaac
ctcaaggcttctgacccagaccagggagccaatggggaggtggagtacttgctcagcaag
cacacgcgcccagaggttcaaaagctctttcacgtcgatccacaaactggggatgtgatc
gtaaaggcacatctggattatgaggttgcaccatcctatgaggtgatcatacaggccatt
gatcgtggtcccaacgccatccctgctcactgtaaactgcatgtcgacctcatcgatgta
aacgataacgcgccaaggattcacacaacctggatttcacgaagctcagctgctgcgact
gtgctggagggagcagaggtcggcaccttcctagctctggtggttgtttacgatgccgat
tcagatagaaatggacaagtaagcgctgtcattaaggatggatctggtcccttccatctt
agaaagacccatgacggcaattacatgatcgaaaccagtggctacctggatcgagagaag
gttatgagttataacatcaccctacttgctcaggatcatggagctccctccctgtcttct
gtaaaacacctaccggtttctgttttggatgagaatgacaatgtaccggtgttctctacc
tccaaatatagcgcttccttcaaggagaacagcattgtaggctatgaggttctccaggtt
gaagcccatgatgacgacctggagtttaacggaagagtttcatacttcatcaacggtccc
accgaccaggagaccagaacacgaccttttagcatccatcaaagaactggcgtcataacg
gtccagcacccactggactacgaggaatcccaaacctactcattcaccgtggaggcagtg
gatcatggacaccccccactgactgccacggccaccgtgcagattgacgttgaggatgta
aatgacaactacccagtcatcaatgaaccaaagccaaggaaaggtgtgggttacataagt
gttcctgtcagtgcatacaagggagagattgtgacggagcttgggaatgaaatcgaagat
ggactcaccacgttgccatttaatcagtctgtcagagatggactcagtggatttcttgca
tccacaataaaggctgaagatttggactcaggacttaatggaaaactccagtacctcatc
actgacagaaaccagcatggcctcttctggatggatcaagatacaggtcagctgttcgtc
aacaccaccaatgccaccgagctcattgggagaacctatgacatggaagtgactatttcc
gacatgggcactcccagcatggccaccaaaatgactctggaggtgactttcatcaacctc
aaggatcatctgaagaactcctcaccaggaaatcgaggacagctcagcttcaccatgatg
atggcaatctgccttggtgccacatgcctccttcttctactggccattgccttggtgaca
acgttctgccgtccggagaaacgggagaaccgggcttacaactgcagacaggctgagtcc
agctacacccgccatccacgccgcccacagaagaacatcagaaagtctgacatccagctg
attcccgtcatccgagggcgaaaggaggagcctcccgaggatgacagcgaagcccagcca
ctcactccaccttcaatgccggaggatcaacaaacggagaggcagtacaacttcataccc
tcaatcatgaacgctagtttccattcccagagctacctggacggggataccaatccaact
ttcacccatcacagcaaaacactccgaaaacctggaaacatcgaactcgatgggtctttg
tctctgacgccatcttcgtcatatcacactcttcgcaaatccagaaacccttcatcttcg
tcctcttcggtctcacattcgagcaccttgaaacgccataagctgcaaccagaaggagaa
gaaacggagtcgcaacgttccacatctcagacgacactcaggaggccgaagacagcggat
ggtcgtggagcacacgaggcagagcgccggcagatgctgcgcaacctggttcgactctcc
atggctgcgttcggggactccatcgagctgtcctcagcctctccagaggtgcagcagatc
tcccagctcctcaccctcctccggcagggccagctgcagccaaagaccaacttccgcgga
aacaagtattcacaccgcaatggcagatatggaggtcaggactgctcggactggcagagc
accaaagacagcgggcacggggagagcgaggccggggacgtggactgggaaccgggacga
gactcgcccatagacccccagctggaggagggactgacccacctgctcagtaacccagac
gatgttttctcggagggcagcgaccccgcctggatggccagactctccctccctctggca
gctgattaccacgacaacgtggggggggacgagccccccccgcgggagggcctggactct
tcatcctccttctccacctttggtaaaactcccgagaaggacggccaactgggcggagcc
ctgctttccgaagttagcacgctattcgaaatgctgatgacgcagaaggccgacgcccac
ccgggcccttcgcccgacatcctgtaccgactgtcagcagcgtaccgccgctccctcggc
ctggacgccggcgccgcggctacagctacggctacgggcagcggccccacgaactctgac
aagaggcccggcctggccgcgccctctggactctaccaatag

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