Cololabis saira (Pacific saury): 133446765
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Entry
133446765 CDS
T09849
Symbol
pcdh12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133446765 (pcdh12)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Protocadherins
133446765 (pcdh12)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
133446765
NCBI-ProteinID:
XP_061580825
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All DBs
Position
7:12148046..12178694
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AA seq
1173 aa
AA seq
DB search
MMLLALLLVLSLCSETLSSESSSITVQYRVWEEQPAGTRVGSLVDDLRQRDEGGLLEDFQ
VVEQGKALPFSVTGRDGVVSTQGQLDREELCRGSDLCEVAFSVLYRKSGAVNCLRVRVEV
MDLNDHSPNFSSIMQEVEISETASLRMRIPLDRAVDPDAGSNGLQTYTLSHNPHFALDVM
VGPGGTKQPELVVMKELDREVQASFELTLVASDKGNPPMSGSTLVHVKIQDSNDNSPTFE
DGSPTVTLSEDTAIGTTIINLKASDPDQGANGEVEYLLSKHTRPEVQKLFHVDPQTGDVI
VKAHLDYEVAPSYEVIIQAIDRGPNAIPAHCKLHVDLIDVNDNAPRIHTTWISRSSAAAT
VLEGAEVGTFLALVVVYDADSDRNGQVSAVIKDGSGPFHLRKTHDGNYMIETSGYLDREK
VMSYNITLLAQDHGAPSLSSVKHLPVSVLDENDNVPVFSTSKYSASFKENSIVGYEVLQV
EAHDDDLEFNGRVSYFINGPTDQETRTRPFSIHQRTGVITVQHPLDYEESQTYSFTVEAV
DHGHPPLTATATVQIDVEDVNDNYPVINEPKPRKGVGYISVPVSAYKGEIVTELGNEIED
GLTTLPFNQSVRDGLSGFLASTIKAEDLDSGLNGKLQYLITDRNQHGLFWMDQDTGQLFV
NTTNATELIGRTYDMEVTISDMGTPSMATKMTLEVTFINLKDHLKNSSPGNRGQLSFTMM
MAICLGATCLLLLLAIALVTTFCRPEKRENRAYNCRQAESSYTRHPRRPQKNIRKSDIQL
IPVIRGRKEEPPEDDSEAQPLTPPSMPEDQQTERQYNFIPSIMNASFHSQSYLDGDTNPT
FTHHSKTLRKPGNIELDGSLSLTPSSSYHTLRKSRNPSSSSSSVSHSSTLKRHKLQPEGE
ETESQRSTSQTTLRRPKTADGRGAHEAERRQMLRNLVRLSMAAFGDSIELSSASPEVQQI
SQLLTLLRQGQLQPKTNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDVDWEPGR
DSPIDPQLEEGLTHLLSNPDDVFSEGSDPAWMARLSLPLAADYHDNVGGDEPPPREGLDS
SSSFSTFGKTPEKDGQLGGALLSEVSTLFEMLMTQKADAHPGPSPDILYRLSAAYRRSLG
LDAGAAATATATGSGPTNSDKRPGLAAPSGLYQ
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctggctctgcttctggttctgagtctttgctctgagactctgtcctctgag
tcgtcatcaataaccgtccagtaccgggtttgggaggagcagcctgcgggaacccgggtc
ggcagcctggtggacgacctgcggcagagggacgaaggtggcttactggaggatttccag
gtggtggagcagggtaaggcccttcctttctccgtcaccggccgggacggggttgtctcc
acccaaggccagctggacagggaggagctgtgccgcggctcggacctgtgcgaggtggcc
ttcagcgtcctgtacaggaaaagcggcgccgtgaactgcctgcgcgttcgtgtggaggtg
atggacctgaacgaccacagtcccaatttctccagcattatgcaggaagtggagatttca
gagaccgccagcctccggatgcgtatccctttggaccgggcggttgatcccgatgcaggg
tccaatggcctccaaacgtacacactatctcacaacccacactttgccctggatgtgatg
gttggtccgggtgggaccaaacagccagagctggtggttatgaaggaactggacagggag
gttcaggcatcctttgaactcaccctggtggcgtcagataaaggaaacccaccaatgtcc
gggagcacgttagttcatgttaaaatccaggactcgaacgacaacagtcctacatttgaa
gatggcagtcccactgtgacattaagtgaggacacagccattggtacaaccatcatcaac
ctcaaggcttctgacccagaccagggagccaatggggaggtggagtacttgctcagcaag
cacacgcgcccagaggttcaaaagctctttcacgtcgatccacaaactggggatgtgatc
gtaaaggcacatctggattatgaggttgcaccatcctatgaggtgatcatacaggccatt
gatcgtggtcccaacgccatccctgctcactgtaaactgcatgtcgacctcatcgatgta
aacgataacgcgccaaggattcacacaacctggatttcacgaagctcagctgctgcgact
gtgctggagggagcagaggtcggcaccttcctagctctggtggttgtttacgatgccgat
tcagatagaaatggacaagtaagcgctgtcattaaggatggatctggtcccttccatctt
agaaagacccatgacggcaattacatgatcgaaaccagtggctacctggatcgagagaag
gttatgagttataacatcaccctacttgctcaggatcatggagctccctccctgtcttct
gtaaaacacctaccggtttctgttttggatgagaatgacaatgtaccggtgttctctacc
tccaaatatagcgcttccttcaaggagaacagcattgtaggctatgaggttctccaggtt
gaagcccatgatgacgacctggagtttaacggaagagtttcatacttcatcaacggtccc
accgaccaggagaccagaacacgaccttttagcatccatcaaagaactggcgtcataacg
gtccagcacccactggactacgaggaatcccaaacctactcattcaccgtggaggcagtg
gatcatggacaccccccactgactgccacggccaccgtgcagattgacgttgaggatgta
aatgacaactacccagtcatcaatgaaccaaagccaaggaaaggtgtgggttacataagt
gttcctgtcagtgcatacaagggagagattgtgacggagcttgggaatgaaatcgaagat
ggactcaccacgttgccatttaatcagtctgtcagagatggactcagtggatttcttgca
tccacaataaaggctgaagatttggactcaggacttaatggaaaactccagtacctcatc
actgacagaaaccagcatggcctcttctggatggatcaagatacaggtcagctgttcgtc
aacaccaccaatgccaccgagctcattgggagaacctatgacatggaagtgactatttcc
gacatgggcactcccagcatggccaccaaaatgactctggaggtgactttcatcaacctc
aaggatcatctgaagaactcctcaccaggaaatcgaggacagctcagcttcaccatgatg
atggcaatctgccttggtgccacatgcctccttcttctactggccattgccttggtgaca
acgttctgccgtccggagaaacgggagaaccgggcttacaactgcagacaggctgagtcc
agctacacccgccatccacgccgcccacagaagaacatcagaaagtctgacatccagctg
attcccgtcatccgagggcgaaaggaggagcctcccgaggatgacagcgaagcccagcca
ctcactccaccttcaatgccggaggatcaacaaacggagaggcagtacaacttcataccc
tcaatcatgaacgctagtttccattcccagagctacctggacggggataccaatccaact
ttcacccatcacagcaaaacactccgaaaacctggaaacatcgaactcgatgggtctttg
tctctgacgccatcttcgtcatatcacactcttcgcaaatccagaaacccttcatcttcg
tcctcttcggtctcacattcgagcaccttgaaacgccataagctgcaaccagaaggagaa
gaaacggagtcgcaacgttccacatctcagacgacactcaggaggccgaagacagcggat
ggtcgtggagcacacgaggcagagcgccggcagatgctgcgcaacctggttcgactctcc
atggctgcgttcggggactccatcgagctgtcctcagcctctccagaggtgcagcagatc
tcccagctcctcaccctcctccggcagggccagctgcagccaaagaccaacttccgcgga
aacaagtattcacaccgcaatggcagatatggaggtcaggactgctcggactggcagagc
accaaagacagcgggcacggggagagcgaggccggggacgtggactgggaaccgggacga
gactcgcccatagacccccagctggaggagggactgacccacctgctcagtaacccagac
gatgttttctcggagggcagcgaccccgcctggatggccagactctccctccctctggca
gctgattaccacgacaacgtggggggggacgagccccccccgcgggagggcctggactct
tcatcctccttctccacctttggtaaaactcccgagaaggacggccaactgggcggagcc
ctgctttccgaagttagcacgctattcgaaatgctgatgacgcagaaggccgacgcccac
ccgggcccttcgcccgacatcctgtaccgactgtcagcagcgtaccgccgctccctcggc
ctggacgccggcgccgcggctacagctacggctacgggcagcggccccacgaactctgac
aagaggcccggcctggccgcgccctctggactctaccaatag
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integrated database retrieval system