Cololabis saira (Pacific saury): 133446827
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Entry
133446827 CDS
T09849
Symbol
nkx2.5
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09345
homeobox protein Nkx-2.5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446827 (nkx2.5)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133446827 (nkx2.5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
133446827
NCBI-ProteinID:
XP_061580935
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Position
7:complement(19478087..19480759)
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AA seq
307 aa
AA seq
DB search
MFPSPSTSTPFSVKDILNLEQNQDVMVPSLDVSSRMDCCSGPTSSSCMLSRLNLKQEPLR
DGALFEEDVHDSKVARRHGLNFASTFYTKAHIEMNNGGKSDEEKRRKEDFSSLTESAEEM
KADDVERAKPRRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDHLAGALKLTPTQVKIW
FQNRRYKCKRQRQDQSLEMVSLPPRRVSVPVLVRDGKPCVAADAASYTPSYSSMAPINHY
YNNYPAFSGYNTNYACSHHPAASVQTVQGSPNNGNYMNFGVGDLNNVQNTFSPPGSGVSS
LHGIRTW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccagccccagcacgtccactcccttctccgtaaaggatatattaaatctggag
cagaatcaggacgtcatggttccttctctggacgtttcctctcgcatggactgctgcagc
gggcccacatcctcctcctgcatgctgtcgcgcctgaacctgaagcaggagcctctccgg
gacggggctctgtttgaggaggacgtgcacgactccaaagtcgccagacgccacggcctc
aacttcgcatctacattttacaccaaagcccacatagaaatgaacaatggggggaaatcc
gacgaggagaaacggagaaaagaggatttcagttccttgacggagtctgcggaggagatg
aaggccgatgatgtggagcgggccaagccgcggagacgcaggaagccgcgcgtcctgttc
tcgcaggcgcaggtgtacgagctggagcggcgcttcaagcagcagcgctacctgtccgcc
ccggagagagaccacctggccggcgcgctcaagctgacccccacgcaggtgaagatctgg
ttccagaaccggaggtacaagtgcaagcggcagcggcaggaccagagcctggagatggtg
tccctgccgcccaggagggtgtcggtgccggtgctggtgcgggacgggaagccctgcgtg
gcggcggacgcggcctcctacaccccgtcctacagcagcatggcccccatcaaccactac
tacaacaactacccggccttcagcggctacaacaccaactatgcgtgcagccatcacccc
gccgcgtccgtgcagactgtgcagggatcccccaacaacgggaattacatgaactttggg
gtcggggacttgaataatgtgcagaacaccttctccccccccggcagcggagtgtcttcg
ttacacggaattaggacatggtaa
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