Cololabis saira (Pacific saury): 133446884
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Entry
133446884 CDS
T09849
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133446884 (rlim)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133446884 (rlim)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133446884 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133446884
NCBI-ProteinID:
XP_061581069
LinkDB
All DBs
Position
7:complement(22584387..22595479)
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AA seq
710 aa
AA seq
DB search
MEGSDGVEPGSSDQPESQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGELT
EDELISRLHQIKEGPEQQNNNPSTENSEDPPEQPEASEDPAGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPSEQPPEAEEGIA
NPEPPVPMETEVVEEPVVEELAVIVEPEPEPVPEPEPEAEPEPEPEPEPEPEAELEPEPE
PEPEPEAEPEPEPEPEPEPEQLPEPEPVPDPEPEPEPELEEVVSPEVVEEPPSPPVALPV
QPPPCSSPRRGQRRARSRSPEPRRTRARIARSRSPLNLDQLDGLPSPRHSYSAQSPSSST
NTTPVLQVEGSSRTRQHVLSRQSTADGDAQSPRAGAESVPEAPNVGSQEGDAAGAEGGSA
ERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSER
AGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRG
ASTPADLQTLNNPDGNNADASTADVDEQPVVAGVRERTVETDTNESLATGSSPSGGRARP
RPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCI
TEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacggtgttgagccgggtagcagtgaccagccagagtcacagcgcagg
aggcagctggatcgccttgacagagaggaggccttctaccagtttgtcaataatctcagc
gaggaggactatcgtcttatgagagacaacaatcttttgggcaatccaggggagttaacg
gaagatgagctgattagtagactgcatcaaatcaaagaaggcccagagcagcagaataac
aaccctagtactgaaaatagcgaagatccacctgagcaaccagaggcctctgaggatcct
gctggtggggatagtctcctggactggctaaacacggtccgacgcacaggcaacacaacc
agaactggtcatcgtggaaaccagtcctggagggctgtgagccagaccaacccaaatagt
ggtgattttcgctttagcttggaaataagtgtgaaccgcaacctggctgaacagcaggct
gccgctgaaggagagcaggaaccttctgaacagcctcccgaggctgaagagggcatcgca
aatcctgaaccaccggttcctatggagacggaggtggttgaagaaccggttgtagaagaa
ttggctgtcattgtggagcctgagccggagccagtgccggaaccagagccggaggcagag
ccagaaccagaaccggagccggaaccggagccggaggcagagcttgaaccggagccagaa
ccggaaccagagccagaggcagagccggagccggagccggaaccagagccggaaccagag
caactgccagaaccagagccagtgccagatccggagccggagccagagccagaactagaa
gaggttgtttcaccagaagtcgtggaggaacctcccagcccacctgtagccctgccagtt
caacccccaccgtgttcttctccacgccgaggtcaaaggagagcccgcagccgcagtcca
gagccacgcaggactagggctcgtattgccaggagccgctcccccctcaacttggatcaa
cttgatggtctaccgagcccacggcattcttatagcgcccagagccctagttcttccacc
aataccacacctgtgcttcaagtggagggcagttcacggactcgacaacatgttctttct
cggcaaagcacagcagatggtgatgctcagtcacctagagctggtgccgaatcagttcca
gaggccccaaatgtaggatctcaggaaggagacgctgctggggctgaggggggttcagca
gagcgccggccccctactataatgcttgatctccaggtgcgtcgcgtgcgtccaggcgaa
tatcggcaaagagacagcattgccagtcgaacccggtctcgctcccagaactcaaacaac
acatttctttatgagagtgagcgtggcggatttcgtaggactttctcccgatcggagcgt
gctggcgtgaggacctatgtcagcactattcgtatccctatccgaagaatctctgatgca
ggtttgggagaagcaacctcaatggctctccagtctatgattaggcagataatgacaggc
tttggtgagctcggctacctcatggactcagactcagattcttccgattcaaatcgcgga
gccagcacacctgcagacttgcaaaccctcaacaatccagatggtaataatgctgacgcc
tcaactgctgatgttgatgagcagccagttgttgctggagtaagggaaaggacggttgag
actgatacgaatgagagccttgccaccgggtcatcaccctctggtggtcgggctcgcccg
agaccacctatcagcctagaggagcccagctcactgcccttcctgcggcttgctcacttc
ttcctcctcaacgatgatgatgaggaccagccccaggggctgaccaaagaacagattgac
aacctctccatgcgcaattttggtgagagtgatgcgctgaagacctgtagtgtctgcata
acagagtatgcagaagggaacaagctacgtaagcttccctgctctcatgaataccatgtg
cactgcatagatcgctggctttctgaaaactccacttgccccatctgccgcagggctgtc
ctggtgtcagccaaccgagagagtgtggtgtaa
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