Cololabis saira (Pacific saury): 133446890
Help
Entry
133446890 CDS
T09849
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133446890 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446890 (atrx)
03036 Chromosome and associated proteins [BR:
csai03036
]
133446890 (atrx)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133446890 (atrx)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133446890 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133446890
NCBI-ProteinID:
XP_061581076
LinkDB
All DBs
Position
7:complement(22793782..22835706)
Genome browser
AA seq
2272 aa
AA seq
DB search
MSLASSESHLDKMAGKEEEPGSSAESVKASSSRNKRKASTVCKHTGLNESDASAESENEG
ATSDSNPASGSKGTLVIRPTANENKGAMKLRVDFKHKNTDDTLPKKVSCTACGKQVNQFQ
RNSLHKHPALKVLICKSCYNYYTSDDISRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKK
CILRNLGRKELSSITDENSKWHCFVCQSEPLQDLVLKCRSIMEKQEHMQLKQQKKDKPEE
RGSKKDKSKAAKEHKAVTNGKEHPEGSGTMTFSYKKLEIPKELIKKAKKLVETTTGLNNT
FIQFIQQTAEDQGNKSIRYRHLKAFKAVLSDLKKAHNALEAALEPEFKNMELQNGNEGQH
VRQTTTVEVHAEKDDMDSVAGSVHEADTVQEVDNKLPNEADSVCKDDTAEEENKEVLDEA
DSVHEDTTGEEGKEPHKEAESVCEMETTEEGSQEQQSKPDVDKNEVSNDTEAKDHQLEPE
VTKKPVETGLCDDMPVSTTGEISLDQDIMSVPPSVPEELFQMVESLADSSMLSQTDNTTD
TETKSNGNSAESVNPQPKVKNLIVKLTPVPVVKTCESRSSRSKSRENEAAVKEECEKKSG
DGKNSASGSVDEASSPPPSRRSSRVKTTPLRKQAEKKGKKESSESESEEDAKDKDKSSKK
SSKQAEKKSKKESSESEEDTKDKDAKDKEKSSKKSSKQAEKKSKKDSSESEEDAKDKSSK
KSSKQAEKKSKKESSESESEEDAKDKDVKDKDKSSKKSSKQAEKKSKKESSESEEEDKDA
KDKSSKKSSKQAEKKSKESSESEEVAKDKDKSPKKSSKQAEKKSKKESSESEEDAKDKDK
SSKKSSKQAEKKSKEESSESEEDAKDKSSKKSSKNTKGVKEETKASDKTMEDSDSDEVPH
ILLEKAAEGNSSDEEQESTTAKGSLSKANASTRNKEKSSKRKRKSESSGSDAESKGQKKN
KKKKEKGSDSSESDSDQEKDTKTKAATSRRRSSRVKKQDDAKEEEKSSPERKKPNRKRSY
EKKRKGKSPKATSKLQSSSSEDEEEEQADGASGEDSDEQKIKPIVEDNVVGGGGTFQQSS
GDEVDTKEDVTQGCGDDDDDDPENRIAKKMLLAQIKSNYSSGADTSSDEDEEADKEKKSS
KKVKEEEEDEDDDEDEDEDETEDSGSDIEVKKTGRRHKLLRHKLSLSDGESGEEKKKKNK
GGKKKKVSSDDSMDSDFEKSESSSSSGMSEEVSESEDDGKRRKTRSSKKKDDETQRSYKQ
QKKKRRRIKVQDDSSSNEKSGEGDDDDEGKKGRKKIRRILKDEKLRTETRDALKEEEERR
QRIAEREALREKLREVIVVKETSEVTCPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQ
VDGVQFMWDCCCESVKKMEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLDFSTALV
VCPLNTVLNWLNEFEKWQVGFKDDESLEVTELATVKRPQERAYALQSWQESGGIMIIGYE
MYRNLTQGRNIKSKKLKETIQKTLVDPGPDIVICDEGHILKNEASAVSKAMNSIRTRRRV
VLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTPQDVRIMKKRA
HILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVTPLQCKLYRHYLEHFTGVGNALEGG
RGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASETDESSMSMTS
EDEKAKKKKKQAKGKKKGSDDSDSDDVEVIKEWNTSSRGKNGEGRNRAEPVEEPARGGPA
SPCSADWHKEFVTEADAEILEHSGKITLLFEIMRMAEEVEEKVLVFSQSLISLDLIEDFL
EMACTAKDENKVSPYKGEGKWYRNIDYYRLDGSTNALTRKKWAEEFNDTSNIRGRLFLIS
TRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVYRFGQIKPVYVYRFLAQGTMEEKIY
ERQVTKQSLSFRVVDQQQIERHFTMNELAELYTFEPDLLDDPSEKKSKRATPMLPKDPVL
AELLQNNKNQIFCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRTNFQSPYAP
DMAGSSYFSYNMAALASMTNQQLEDLINQGRQKVIEATNSLKGLTLESLEDIIANVWKDN
PALTESQVQALALGRQATVEMELKRREAVYREVLTRQQTLMMFVQKLITNRKVQEQQLAL
ANQATYLNQLAMQNGMMGGGGLSQMDLLGIYQQLHGRGGQGMGKNPGPSKGV
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggcttcttctgaatcgcacctagataaaatggcaggaaaagaagaggagcct
gggagctcagcagaaagtgtgaaggcttcctcttctcgcaacaaaagaaaagcaagcact
gtatgcaagcacactggattgaatgagtctgatgcttcagccgagagcgagaatgaaggt
gcaacctctgacagtaatccagcaagtggatctaaaggcacattggtgataaggccaact
gcaaatgaaaataaaggcgccatgaagctcagagtggattttaaacacaaaaacacagat
gacaccctgccgaagaaggtcagctgcactgcctgcggaaaacaagttaaccagtttcag
cgcaattctctacacaaacatcctgcgctcaaagtgctcatttgcaagtcatgttacaac
tactacacaagtgatgacatcagcagagattctgatgggatggatgagcaatgcaggtgg
tgtgctgaaggtggaaagctcatctgctgtgactactgcaacaatgccttctgcaagaag
tgtattctgcgcaacctgggcaggaaggagctttcatccattactgatgagaactcaaag
tggcattgcttcgtgtgccagtctgagccccttcaggatctggtcttgaaatgccgcagc
atcatggagaaacaggaacacatgcagctcaaacagcaaaaaaaagataaaccagaggaa
cgtggaagcaagaaggacaagagcaaagcggccaaagagcacaaagcagttacaaatgga
aaagaacatcctgaaggctctgggaccatgacattctcttacaaaaaactggaaataccc
aaagaactgataaagaaagcaaaaaagcttgttgaaactacaaccggtttgaataatact
ttcatccagttcatccagcagacagctgaggaccagggaaacaagtctatcaggtatcgg
catttgaaagccttcaaagcagtgctttctgatttgaaaaaggcccacaatgctttggag
gcggctttagagccggaatttaaaaatatggagttgcagaatggaaatgaaggacagcat
gttagacaaaccactactgttgaggtacatgcagaaaaagatgacatggacagtgttgca
ggttcagttcatgaggctgacacagtccaagaggtggacaacaagctgcctaatgaagct
gattccgtttgcaaggacgacacagctgaagaggaaaacaaagaagtgcttgatgaagca
gattcagttcatgaggacacaactggcgaggagggcaaggaaccacataaggaagctgaa
tcagtatgtgagatggaaacaactgaagaggggagccaagagcagcagagcaagccggat
gtggataagaatgaagtatcaaatgatactgaagcaaaagaccaccaattggaacctgaa
gtaaccaaaaaacccgttgaaactggactctgtgatgatatgccagtgtcaaccaccggt
gaaatatcattagatcaggacattatgtctgtgcctccttcagttcccgaggagcttttc
cagatggtggagagccttgcagattcctccatgctgtcacagactgacaatactacagac
acggagacaaaatcaaacggaaactctgcagaatctgtgaacccccagcccaaagtgaag
aatctcatagttaaactgacacctgtaccagtcgtgaaaacttgtgagtcaaggtcctcc
aggtccaaaagcagagaaaatgaggcagcggtgaaggaagagtgtgaaaagaagagcggg
gatgggaaaaattctgcttccggttcagttgacgaggccagcagcccaccacccagtcgt
cgttctagtagagtcaaaacaactcctttgagaaagcaggcagagaaaaagggcaagaag
gagtcttctgagtctgagtcggaggaagacgcaaaggacaaggacaaatcctccaaaaaa
tccagtaagcaggcagagaaaaagagcaagaaggagtcctctgagtcggaggaagacaca
aaggacaaggacgcaaaggacaaggaaaaatcctccaagaaatctagtaagcaggcagag
aaaaagagcaagaaggattcgtctgagtcggaggaagacgcaaaggacaaatcctccaag
aaatccagtaagcaggcagagaaaaagagcaagaaggagtcctctgagtctgaatcggag
gaagacgcaaaggacaaggatgtaaaggacaaggacaaatcctccaagaaatctagtaag
caggcagagaaaaagagcaagaaggagtcctctgagtcggaggaagaggacaaggacgcc
aaggacaaatcctctaagaaatccagtaagcaggcagagaaaaagagcaaggagtcttct
gagtcggaggaagtcgcaaaggacaaggacaaatcccccaagaaatccagtaagcaggca
gagaaaaagagcaagaaagagtcctctgagtcggaggaagacgcaaaggacaaggacaaa
tcctccaagaaatccagtaagcaggcagagaaaaagagcaaggaggagtcctctgagtcg
gaggaagacgcaaaggacaaatcctccaagaaatccagtaagaatacaaaaggagtcaaa
gaggagactaaagcttcagataagacaatggaagactctgactcggatgaagttccacac
atattgctggagaaagcagcagaaggcaacagctccgacgaagaacaagaaagcacaacc
gccaaagggagcttatccaaagcaaacgcatccacacggaataaagagaagtcctccaaa
cggaagaggaagtctgagagctctggttcagatgcagaaagtaaaggccagaagaagaac
aagaagaaaaaggagaaaggctcggactcctctgaatcagactctgaccaggagaaggac
acaaagacgaaagctgccacatcaaggaggagatccagtcgtgtaaagaaacaagatgat
gcaaaagaggaagaaaaaagctcaccggaaagaaagaagcctaatcggaagcggtcttat
gaaaagaagcgcaaaggaaagagtcccaaagcaacctccaagttgcagtcttcctccagt
gaagatgaagaggaggaacaggctgatggtgcctctggagaggacagtgatgagcagaag
atcaagcccattgtggaggacaatgtggtcggcggtggcggaaccttccaacagtcctca
ggagatgaagtggacactaaagaggatgtcactcagggttgtggcgacgacgatgatgac
gatcctgaaaacaggattgctaagaaaatgcttctcgcccaaataaaatccaactactct
tcgggagcagacacctcctccgatgaggatgaagaagcggataaagaaaagaagtcttca
aagaaagttaaagaagaagaagaagatgaggatgatgatgaggatgaagatgaagatgaa
actgaagactctggctcagacattgaagtgaagaagactggcagacgccacaagttactt
cgtcataaactgtctctcagtgacggtgaatcaggggaagagaaaaaaaagaaaaacaag
ggagggaagaagaagaaagtaagcagcgatgactctatggactcagactttgaaaagtca
gagtccagttcatcgtctgggatgagtgaagaggttagcgaatcggaagacgatggcaag
cgtcgaaagaccagatcttcaaagaaaaaagatgacgagacacagagaagttacaagcag
cagaaaaagaagcggcgcaggatcaaagttcaggacgactcctccagcaatgagaagagt
ggagaaggtgacgacgatgatgaaggcaaaaagggccgcaaaaagatccgcagaatcttg
aaggatgagaagctgcgcacagagacgagagatgctctgaaagaggaggaggaaaggaga
cagcgcattgctgaaagagaggctctcagggagaaacttcgagaggtgatcgtcgtgaag
gagacttccgaggtgacctgtcctatcacaaccaagctcgtgctggatgaggatgaagag
acgaaggagccattggtgcaagtgcacaggaaccttgttacaaaactcaaacctcatcag
gttgatggggtgcagttcatgtgggactgctgctgcgaatctgtgaaaaagatggaaaag
tctagtgggtctggatgcatcctagcccattgtatgggtctaggaaaaactctgcaggtg
gtgacattcctccatacattgctgctttgtgagaagcttgatttctccacagcgctggtg
gtctgtcctctgaacactgtgctcaactggctcaatgagtttgagaagtggcaagtaggc
tttaaggatgatgagagtttagaggtgactgaactagccacagtgaagaggccacaggag
cgagcttacgccctccagtcatggcaggagtcaggtggcattatgatcattggctacgaa
atgtaccgaaatctgactcagggcaggaacatcaagagcaagaagctcaaggagacaatt
cagaagacgcttgtagatccaggtccagacatcgtgatttgtgatgaaggtcatatcctg
aagaatgaggcttctgctgtgtccaaagcgatgaactctatcaggacgaggaggagggtt
gtgttgactggaacacctttacaaaacaaccttattgaataccactgcatggtgaacttc
atcaaggaaaacctgcttgggtcagttaaggagttcaggaaccgtttcattaatcccatt
cagaacggccagtgtgccgactcgactccacaagatgtccggattatgaaaaagagggct
cacattctctatgagatgctggctggctgtgtccagaggaaagattacacagccctcacc
aagttcctgccacccaaacatgagtacgtgttgtcaatccgagtgactccactccagtgt
aagctctacagacactacttggagcactttacaggtgtggggaatgctctggaagggggc
cggggccgtgcgggaacaaaactcttccaggatttccagatgctcagcagaatttggacc
catccctggtgccttcagctggactacatcagtaaagaaaacaagggttactttgacgaa
gatagcatggatgaattcatcgcctcagaaacagacgaatcctccatgagtatgacatct
gaagacgagaaggcaaaaaagaaaaagaagcaggcaaaagggaaaaagaagggctccgat
gactcggacagtgatgacgtagaggtcataaaggagtggaacaccagctctcgtggcaag
aacggagaaggacgaaacagagccgagcctgtggaggagccagcgcgtggcgggccagcg
agtccctgctctgctgactggcataaggagtttgttaccgaggctgacgctgagatcctg
gaacactctgggaaaataacgctcctctttgagatcatgcgtatggctgaggaagtagaa
gaaaaagtgttggtcttcagtcagtctctcatctctttggacctgattgaagacttcctc
gagatggcttgcacagctaaagatgaaaacaaggtctctccatacaaaggtgaaggcaaa
tggtacagaaacatcgactactatcgcctcgatggctccaccaatgctcttaccaggaag
aagtgggctgaagagtttaatgacaccagtaacataagaggccgtttgtttcttatatcg
actcgagctggttcactcggcatcaatctggtggcagccaacagggtgatcatcttcgat
gcttcctggaacccctcgtatgacgtccagagtattttcagggtgtaccgctttggccag
attaaaccggtctatgtctacaggttcctcgcacagggtacaatggaagagaagatttat
gaacggcaggtaaccaagcagtctctttcattccgcgttgtggaccagcagcagatcgag
aggcactttacaatgaacgagcttgctgaactgtacacctttgagccggacctgctggat
gatccctccgagaagaagagcaagagagccacacctatgcttcccaaggatcccgtcctg
gcggagctgctgcagaacaataagaaccagattttctgctaccatgagcacgactcattg
ctggaccacaaagaagaggaagccctcagcgaagaggaccgcaaagctgcatgggccgag
tatgaagcggagaaaaagggtctgtccatgaggaccaacttccagtcaccgtatgctcca
gacatggcaggctccagctacttctcatacaacatggcagctttggcctccatgaccaac
cagcagctggaggatctcataaaccagggacggcagaaagtcattgaagcaacaaactca
ttaaaaggtttaactctggaatcattggaagatattattgcaaatgtgtggaaggacaac
ccagcactgactgagagccaggtccaggctttagctttgggacgtcaagccaccgtggag
atggagttgaagcgcagggaagccgtttacagggaagttctgaccaggcagcaaacgttg
atgatgtttgtgcagaagctgatcaccaacaggaaggtgcaagagcagcagctcgctctg
gctaaccaggccacttacctgaaccagctggccatgcagaacggcatgatgggaggtggc
gggctatcccaaatggacctgcttggaatttaccagcagctccacgggaggggagggcaa
ggcatgggcaagaaccctggcccctcaaagggggtgtag
DBGET
integrated database retrieval system
