Cololabis saira (Pacific saury): 133446950
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Entry
133446950 CDS
T09849
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133446950 (rnf20)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133446950 (rnf20)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133446950 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
133446950
NCBI-ProteinID:
XP_061581171
LinkDB
All DBs
Position
7:25005514..25020528
Genome browser
AA seq
1025 aa
AA seq
DB search
MSGLKRPADPSGASSSGGPPEKRRERDGEDGGPGVSAGGSTAVETVIKLGGVSNSEEQDI
KALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQCDENIQLMI
RRYDDVSGEPEKSPSGEGRSLKPETPEPDGDSNQERAKERGTMGEAANSFLATLASSTSE
EMEAELQERVESSQKQASRVVEIYERLKSTVDQLQTELDAGADGSVWQVASKLNSLLSSE
NERLQRLAEDLKQKHSHMTSESRPLGRAANKADQRVGELQTRIEELQWDMEKIRRRENRL
NAHLSEILERVKSKGYKVCGEASSVCGTITINKRKFEEMNSELEENTELAENRLVELQKL
QQDLQIVQHDNNSMKTELVSRAEGLVKDTSEYRCLQSQFSVLYNESLILKSQLDETRARL
NTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVKKEYEMLRIEFEQTLAANEQA
ALNTLFLSGPINREMRHLISTLQTHNQQLKGEVVKYKLRLRETQAELNQVRASKGNAILQ
SQSSTEMDLKDETTSPSTLAVSGEPVVKTEPDTGSSTPSSTGASVKTEPGVEPEASIKEE
EKEEKKEKEEKKEKEIKKEEKEKERERPTRGGGISGGGVIKEEKEKPGSSGQPEESAGER
LSVVGGSKRKEIEQLKIVRVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAK
SEGEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSE
MDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTL
KTQVDAQLQVVRKLEEKERLLQGTINAAERELTLRTQALDMNKRKAQESALLSEDLRTQL
EQVQQRLKLVRAEVVENSISREKESFNAQRAQEDISKLRRKIEKAKKPAEKISNGDDILN
EEINEYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFH
RIYIG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctgaagcgtcccgcggaccccagcggagcctcgtcctccggcggcccgccg
gagaagcgcagggagcgggacggagaggacggggggcccggggtcagcgctggaggcagc
accgccgtggagacggtcatcaagctgggaggggtgtccaactctgaagaacaagacatc
aaagctctccaagccaagaaccgaaagttgggagaatctcttgatcaaagacaggttatt
gaagatgagctgcgagagcgaattgaacgactggagacccgtcaggcaacggatgatgcc
agtctgctgatcctcaacagatactggaaccagtgtgatgaaaatattcaattgatgatc
agacgttatgacgacgtgagcggcgagccagagaagtcgccatcaggggaggggcggagc
ctgaagcctgaaactccagaacctgatggtgactccaaccaggaaagggccaaagagaga
ggtaccatgggagaggctgccaactccttcctggctacactggcgagcagcaccagtgag
gagatggaggcagagctccaggagagagtggagtccagccagaagcaggccagccgcgtc
gtggagatttacgagcgtctaaagagtaccgtggaccagctccagacagagttggacgct
ggagctgatggcagtgtgtggcaggtagcatccaagctcaactccctcctgagcagtgag
aatgaacggcttcaacgactggcagaggatctcaagcagaagcacagtcacatgaccagc
gaatcccggccgctgggtcgtgccgccaacaaagccgaccagcgcgtgggtgagctgcag
acacggattgaagagcttcagtgggacatggagaagatccgccggcgtgagaacaggctc
aacgcacatctgagcgagatactggagagggtaaaaagcaaaggctataaagtttgcggg
gaggccagcagtgtttgtggaaccatcaccattaacaagagaaagtttgaggaaatgaac
agtgagttggaggagaacacggagctggcagagaatcgcctcgtagagctgcagaaactc
cagcaggacctgcaaattgttcagcacgataacaacagcatgaagacggagctggtgagt
cgagccgagggcctggtcaaagacacctctgagtaccgctgtctgcagtcacagttctct
gtgctctacaatgagtcgctgatcctcaagagtcaattagatgagacacgtgctcgcctc
aacacaaccaggacggcacgccttcgacagctggagcacatggagaacgatgaggtggct
ctgcagaggaaggttcgtacagaggtctttcaactggaagacacactggcccaggtgaag
aaggagtacgagatgttgcgcatcgaatttgaacagactcttgctgctaatgaacaagca
gccttgaatacactctttctctcaggtcctatcaacagggagatgcgtcatctcataagc
actctgcaaactcacaaccaacagctgaagggagaggtggtgaaatacaagctgagactt
agagagacacaagcagagctcaaccaggttcgagcttccaagggcaacgccattcttcag
tcacagtcaagcacagagatggacttaaaggatgagacaacgtctccttcaaccctagct
gtttctggagaacctgtggtcaagacggagcccgacaccggctcatccacgcccagcagc
actggtgcttcagtgaaaacagaaccaggtgttgaaccagaggcaagcattaaggaagaa
gagaaggaggagaagaaagaaaaggaggaaaagaaagaaaaggagataaagaaagaggag
aaggaaaaggagagagagaggcccactcgaggtggtgggatcagcggcggtggcgtgata
aaggaggagaaggagaagccagggagcagcggccagcccgaggagtcggccggggagcgg
ctctccgtggtcggagggtccaagaggaaggagatcgagcagctgaagattgttcgagtg
gaactcaagaaagcccaggaatctcagagggagatgaagctgctgctggacatgtaccgc
tcagcacccaaggaacagagggacaaagtccagctcatggctgctgagaagaaagccaag
tcagagggagaggagctgcggcagcggctgagggagctggaggagagagagaggagggag
ggcaaaaaaatggcggatgaagaggctctcagaaagatccgatctgtggaggaacagatc
gatatcctcaacaagaagttgtccatcgccaaacaggaggaagatgctctgctaagcgag
atggatgtgacaggccaggccttcgaggacatgcaggaacagaacatccgcctcatgcag
cagctccgagaaaaagacgacgccaacttcaagctcatgagtgagagaatcaagtctaac
cagatccacaagcttctgaaagaggagaaggaggagcttgcagaccagctgctcaccctt
aaaactcaggtggacgcgcagctgcaggtggtgaggaaacttgaggagaaggagcgcctc
ctgcaaggcaccatcaacgctgcggaacgagagctgacgcttcgaacgcaagccttggac
atgaacaaacgcaaggctcaggaatctgcgctgctgtcagaagacttgcgaactcagctg
gagcaggttcagcagaggctcaaactggtcagagcggaggtcgttgaaaacagcatctcc
agggaaaaggagtccttcaatgcacagcgagcacaggaggacatttccaaacttcggaga
aagattgaaaaggccaagaaaccagctgagaaaatcagcaacggagacgacatcctgaac
gaggaaatcaacgaatacaaggctcgtctaacctgtccgtgctgcaactctcgggtgaag
gatgccgtactgacgaagtgcttccacgtcttctgcttcgagtgcgttaaaacccgctac
gacacccgccagaggaaatgccccaagtgcaacgctgcctttggagcaaacgacttccat
cgcatttacatcggctaa
DBGET
integrated database retrieval system
