Cololabis saira (Pacific saury): 133446958 Help Entry 133446958         CDS       T09849                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism csai  Cololabis saira (Pacific saury) Pathway csai03040   Spliceosome csai04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     133446958 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     133446958 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:csai03041]     133446958 (prpf19)    04121 Ubiquitin system [BR:csai04121]     133446958 (prpf19)    03400 DNA repair and recombination proteins [BR:csai03400]     133446958 (prpf19) Enzymes [BR:csai01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      133446958 (prpf19) Spliceosome [BR:csai03041]  Complex B   Other components    Prp19 complex     133446958 (prpf19)  Complex C    Prp19-CDC5 complex     133446958 (prpf19) Ubiquitin system [BR:csai04121]  Ubiquitin ligases (E3)   U-box type E3    133446958 (prpf19) DNA repair and recombination proteins [BR:csai03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     133446958 (prpf19) SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Prp19 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 DSE1_N Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C CFAP251_N ASA1 Beta-prop_WDR41 PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_EIPR1 PAC11 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Nup120_160 U-box PROPPIN Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 eIF2A Tricorn_2nd Alpha_humulene_synt Cytochrom_D1 B-prop_COPA_B_2nd Ge1_WD40 zf-Nse Peripla_BP_2 PMFBP1_C CCDC13 Motif Other DBs NCBI-GeneID:  133446958 NCBI-ProteinID:  XP_061581192 LinkDB All DBs Position 7:25131950..25139929 Genome browser AA seq 505 aa AA seqDB search MSLVCAICNEVPEHPCISPVSSHVFERRLIEKFIAENGTDPMNGQPLSEEQLLDIKVTHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL NKEVTAAREALATLKPQAGLVAPQAVPASQPAAAGAGGEPMEISEQVGMTPEIIQKLQDK ATILTTERKKRGKTVPEDLVRAEDLSKYRQVASHAGLHSASVPGILALDVCPSDTNKVLT GGADKNVVVFDKNEEQIVATLKGHTKKVTSVIYHPSQSVVFSASPDNTIRVWSVTAGNCV QVVRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDESAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFTDHTGLVT GVAFGENAKFLTSAGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttggtctgtgcaatctgcaacgaggtgccggagcacccgtgcatctcgcccgtg tccagccatgtgttcgagcgcaggctgatcgagaagttcatagcggagaacggaaccgac ccgatgaacggacagccgctgtccgaggagcagctgctggacatcaaagtgacccatcct attagaccaaaggctccatcagcaacaagtatccctgctattctcaagtcccttcaagat gagtgggatgctgtcatgctccacagcttcaccctgcggcagcagctgcaaacgactcgc caagaactctctcacgccctttatcagcacgatgccgcctgcagagtcattgctcgactc aacaaagaggtcactgctgcaagagaagctcttgccacacttaaaccccaggctggactg gtggcacctcaagctgtccctgcttctcagccagctgcagcaggtgctggcggagaacct atggagataagtgaacaggtgggaatgaccccagagatcatccagaagctccaagacaag gctactatccttaccacagagagaaaaaagagaggaaaaactgttccagaagatctggtc agagctgaagatctcagtaaataccgtcaagtggcttctcatgctggtcttcatagtgcc agtgtgcctggtattctggctctggatgtgtgtccatcagacacaaacaaagtgcttact ggtggagctgataagaacgttgtggtgtttgacaagaacgaggagcagattgtggcaact cttaagggtcacaccaagaaagttacctctgtcatttaccatccctcccagtctgttgtc ttctcagcctctcctgacaacaccatccgcgtgtggtcggtcaccgcgggcaactgtgtg caggtggtgcgtgcccatgaggcaggtgtcactggtctatctcttcacgcaactggagac tacctgctcagctcctccgaggatcagtactgggccttttctgatatccaaactggaaga gtcctcaccaaagttaccgatgaaagcgctggttgtgctctcacttgtgctcagttccac cctgatggtcttatttttggcactggtacggctgactcccaaatcaagatttgggatttg aaagagcgcaccaatgtggccaacttcccaggtcactctggacccgtcacctccattgct ttctctgagaacggatactatctggccacaggtgcccaagatagctctctgaaactgtgg gatctgaggaaactgaagaacttcaagaccatcactctggacaacaactatgaagtgaaa tccctcgtgtttgaccaaagtggaacctacctggctgtaggaggatctgatatccgtgtc tacatctgcaagcagtggtctgaagtgctcaacttcacagaccacacggggttggtgact ggagtggcctttggagaaaatgccaagttcctgacctctgcaggaatggacagaagtcta aaattttacagtttgtag

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