Cololabis saira (Pacific saury): 133447015
Help
Entry
133447015 CDS
T09849
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
csai04261
Adrenergic signaling in cardiomyocytes
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133447015
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133447015
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133447015
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133447015
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133447015
03036 Chromosome and associated proteins [BR:
csai03036
]
133447015
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133447015
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133447015
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133447015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
133447015
NCBI-ProteinID:
XP_061581373
LinkDB
All DBs
Position
7:complement(27251840..27278771)
Genome browser
AA seq
452 aa
AA seq
DB search
MLSPIQVLCSDITTLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREPE
SKTEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGHIKDISTVTSLQVPVLMPMDLMVEVSPRRVYANAHTYHV
NSISVNSDYETYMSADDLRINLWHLDITDRSFNIVDIKPANMEDLTEVITSAEFHPHHCN
LFVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGGKRRKDDISVDSLDFTKKI
LHTAWHPNENIIAIAATNNLYIFQDKLNSEMH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccccatccaggtcctgtgctctgacatcactaccctttctctggagcctgaa
ccgtttgcctcttacactgaagctgatatcatctccactgttgagttcaaccacacaggt
gagctcctggctacaggggacaaagggggccgtgtggtcatctttcagagagaacctgag
agcaaaactgagccattttcccagggagagtacaacgtgtacagcaccttccagagccat
gagcctgaattcgactaccttaagagtttggagattgaggagaagatcaataagatccga
tggctgcctcagcagaacgctgcacacttcctcctctccaccaatgataagaccattaag
ttgtggaaggtgagcgaacgtgacaaacggccagagggatacaacctgaaggatgaagag
ggccacatcaaggacatctccactgtcacctccttgcaggtgccagtgttgatgcccatg
gacctgatggtggaggtgagccctcggcgtgtgtatgccaacgcccacacctaccatgtc
aactccatctctgtcaactccgactatgagacctacatgtcagctgatgacctgaggatc
aatctgtggcatctggacatcactgaccggagtttcaacattgtggatatcaaaccagcc
aacatggaggatctgacggaggtgatcacatcggccgagtttcacccccaccactgtaac
ctgtttgtctacagcagcagcaaaggcaccctgcgcctctgtgacatgagagaagcggcg
ttatgtgacaagcactccaaactgtttgaagagccggaagaccccagcgctcgctccttc
ttctctgagattatctcctccgtgtcagacgtgaagttcagtcacagtggtcgctacctg
ctcaccagagactacctgaccgctaaagtgtgggacctcaacatggagagcaaacccctg
gagacgtaccaggttcatgattacctccgcagcaagttgtgttccctgtatgagaacgac
tgcatctttgacaagtttgagtgtgcctggaacggctctgacagcgtgatcatgaccgga
gcctacaacaacttcttccgcatgttcgaccgcaacaccaaacgggacgtgaccctggag
gcatcgagggagagcagcaaacccagggctgtcctgaagccgcggagggtctgtgccgcc
ggaggcaagcgccggaaggatgacatcagcgtggacagcctggacttcaccaagaagatc
ctccacacagcctggcacccgaatgagaacatcattgccatcgccgccaccaacaacctg
tacatcttccaggacaaactcaactctgagatgcattaa
DBGET
integrated database retrieval system
