Cololabis saira (Pacific saury): 133447056
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Entry
133447056 CDS
T09849
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133447056 (chrna6)
04082 Neuroactive ligand signaling
133447056 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133447056 (chrna6)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133447056 (chrna6)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
Red1
Motif
Other DBs
NCBI-GeneID:
133447056
NCBI-ProteinID:
XP_061581456
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Position
7:complement(29205804..29235364)
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AA seq
578 aa
AA seq
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MSLTRMRCSPPSFVRGRHRQAEGADLSMNFSGKLITFLLLVLLAAQDCFSSKGEDRLFRR
LFRRYNQFIRPVENVSDPVTVEFEVSISQLVKVDEVNQIMETNLWLRHIWNDYKLKWTPI
EYDGIEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKALLKFDGTITWVPPAIFKSSCPM
DITYFPFDYQNCSMKFGSWTYDKAKIDLVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKY
NCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLL
SLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPMTHTMPDW
VRAVFLGVLPRVMLMRRPIDQGCSSPARITGGGNKKRKNSIGGGSSSGSVSIGGITGGVP
CPALESGSGGGGTSSAAGSMNCVEYGELNRDLNRRCPYRGKEVPTPVPPPMAPTPPQGPQ
VPGPPESDLPKIPRPLNAPSPVNAVVAFSVVSPEIKQAIESVKYIAENMRTRNKAKQVED
DWKYVAMVIDRIFLWVFVTVCVLGTIGLFLQPLISFFK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaccagaatgcgttgttccccgccgtcttttgtccgtggcaggcatcgccag
gcggagggcgctgatctgtcgatgaatttctccgggaagctgataaccttcctcctgctg
gtgctgctggcggcgcaagactgtttctcatctaagggagaggacaggttgttccgaagg
ttgttccggaggtataaccagttcattcgaccagtggagaatgtgtctgatccagttact
gtggagtttgaggtgtccatatctcagcttgtcaaagtggatgaggtgaatcaaattatg
gaaactaacttgtggctgagacatatatggaacgactacaagctaaaatggaccccaatt
gaatatgatgggatcgagttcattcgggtcccctccaataagatttggaggccagatatt
gtcttgtacaacaatgctgtgggggatttcctggtggaagacaagaccaaggctctgctg
aagtttgatggcacgatcacttgggttcctccggctatattcaaatcctcctgccccatg
gacatcacctacttcccctttgactaccagaactgctccatgaaatttggctcctggacc
tacgacaaagccaagatcgacttggtgctcattggctcaaaggtgaacctgaaagacttc
tgggaaagtggggagtgggagatcatagatgcaccaggatacaaacatgacatcaagtat
aactgctgtgaagagatctaccctgacatcacctactccttctacatccgccgcctgcct
ctcttctacaccatcaacctcatcatcccatgcctcctcatctccttcctcaccgtgtta
gtcttctacctcccgtcggactgtggggagaaggtcaccctgtgcatctcggtcctgctc
tcccttactgtgttcctgctggtcattaccgagaccatcccctccacgtcgctcgtcatc
cctctgattggcgagtacctcctcttcaccatgatttttgtcaccctcagcattgtcatc
accgtctttgtgctgaatgttcactaccgcactcccatgacccacacgatgccggactgg
gtgagagcggtgttcctcggagtgctgcccagagtgatgctgatgaggcggcctattgac
cagggctgctcctcacctgccagaatcacaggaggaggtaacaagaagagaaagaacagc
ataggaggaggaagtagctcaggaagtgtcagcatcggtggaataactgggggcgtgccg
tgtcctgctctggaaagtggctcagggggaggaggaacctcctcagctgcgggctccatg
aactgtgtggaatatggtgagctcaaccgtgacttgaacaggaggtgcccctatagaggc
aaggaggtaccgactcctgttcctcccccaatggcgccaactcctcctcaggggccgcaa
gttccagggccgccggagtcggacctaccaaagataccaaggccccttaacgccccttca
ccggtcaatgctgtcgtcgccttttctgttgtgtcaccagaaatcaagcaggccattgag
agtgtcaagtacattgcagagaacatgaggacccgcaacaaagccaagcaggtggaagat
gactggaagtacgttgccatggtcatcgacaggattttcctgtgggtttttgtgacagtg
tgtgtgttgggaacgataggactcttcctacagccacttatcagcttcttcaaatga
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