Cololabis saira (Pacific saury): 133447147
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Entry
133447147 CDS
T09849
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133447147 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133447147 (cstf2)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
133447147 (cstf2)
U7-dependent histone pre-mRNA processing factors
133447147 (cstf2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
133447147
NCBI-ProteinID:
XP_061581625
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Position
7:complement(32177595..32193726)
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AA seq
514 aa
AA seq
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MATVAAANAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLV
YDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGA
PIIESPYGDNVSPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQL
AYALLQAQVVMRIVDPEIALKMLHRQTAVPPLIPGVQGGGAPPVNPPAQPAVPVSQPQPV
AGMHVNGAPQMMQPPNMGVVPGPMPGPGPGPGPGPVQAPVGPPGNLQHSPTGSAGPAAIE
RPQGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIEPGRPYMGAPPPHQAPPVHMPQMAGG
PPPDMRGPPMDMRGPPMGEPRPMMVDPRGPQMMEPRGPPMEARGRDPRAMDARGPVTGQR
VPMAAGMQGPVPHNMGPNAPAPARPGPGISGVPPSGGGFSPGQSQVSTQDQEKAALIMQV
LQLTPEQIAMLPPEQRQSILILKEQIQKTATGAP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtcgccgcggccaacgcggctgctgcagccgccgctgccgccaacagagac
cccgccgtggatcgatcactgcgatccgtgttcgtgggaaatattccgtatgaagccaca
gaggaacagctgaaagacatattttctgaagtcggacttgttgttagtttcaggttggta
tatgacagggagacggggaagccgaagggctatggcttctgtgagtaccaggaccaggag
acggcgctcagcgccatgaggaacctgaacgggagggagttcagcggccgagccctgcgg
gtggacaacgctgccagcgagaagaacaaggaggagctcaaaagtttggggacgggagct
cctatcattgagtctccttatggagataatgtctcaccagaggaggccccagagtccatc
agcagagctgtggccagtctcccaccagagcagatgtttgaactcatgaaacagatgaaa
ctgtgtgtgcaaaacagtccccaggaggcgaggaacatgctgctgcagaacccccagctg
gcgtacgctctgctgcaggctcaggtggtcatgcggatcgtagacccagagatcgctctg
aaaatgctccatcgtcaaactgcagtcccgcctctgattcccggtgtgcagggtggagga
gcaccacccgtcaatcctcctgcacagcccgccgtgccggtgtctcagccgcagcctgtg
gctggaatgcatgtgaatggagccccccagatgatgcagccccctaacatgggtgttgtg
ccaggaccaatgcctggaccaggaccaggaccgggacccggaccagtacaagcaccagtc
ggacctccaggaaaccttcagcattctcccacaggatcggccggtccagctgccatcgag
cggcctcaaggaccaggtggtatccccccgagagggctgctgggagatggtcctaacgat
cccagaggaggaactctgctgtctgtcaccggagaagtcatcgagcccggccgcccctac
atgggagctcccccacctcaccaagctccacctgtgcacatgccgcagatggcaggcgga
cctcctccagatatgagagggcctccgatggacatgagaggcccacccatgggtgaacct
cgacccatgatggttgacccgcgagggccccagatgatggagccccgagggcctcccatg
gaagccagaggccgtgacccgagagcaatggatgctcgtgggcccgtgacgggccagagg
gttcccatggcagcaggaatgcaaggccctgtccctcataacatgggtccaaatgctcct
gcacctgcaagaccgggtcctggtatttctggcgtccccccttcaggcggcggcttcagt
cctggtcagagtcaggtctccacgcaggaccaggagaaggcggccctgatcatgcaggtg
ttgcagctgaccccagaacagattgccatgttgcctccagagcagcggcagagcatcctc
atcctcaaagagcagattcagaagactgccaccggggcaccttga
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