Cololabis saira (Pacific saury): 133447164
Help
Entry
133447164 CDS
T09849
Symbol
vimr2
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K05640
glial fibrillary acidic protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133447164 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133447164 (vimr2)
Membrane trafficking [BR:
csai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
133447164 (vimr2)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
133447164 (vimr2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF7801
CCDC110
CRWN_second_CC
SPC25_N
UPF0242
DUF2730
Rootletin
ZapB_rel
BRE1B
KASH_CCD
DUF8221
Leu_zip
DUF8104
DUF3584
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
133447164
NCBI-ProteinID:
XP_061581651
LinkDB
All DBs
Position
7
Genome browser
AA seq
386 aa
AA seq
DB search
MAMLRASSYRKLFEDGSWSRSGGSSVRCAGQYRASVRAAAVDECECDKFDFVAAKSLNKE
GLNQFIQERNTIAVLNDRLVRLIELAHSFEEENESLECQIAALEEQLASRQTSSITSTVA
VPDYSLDAVVQRLRQQRDQILSDSEELKRELEHLKTEYEKVAEQRIFIQQDRQDVAEVVD
AVTAECLALREQVAIYQEQLDNMDAQHKTEVGSLLEPDERTLGATATRFGSPDITPALNV
KEYYCQLAERLQIDCGASSSALVRRGDGKEVEGNVASAVKDLPDINDAGELKTLISELQG
ELAELEKSNEELEDEVEIKRAAYMDEVAELELTIDGIRQQEADFKAQMKEQCEEYKELLD
EKMARDMEIAAYRSLVEEEEDRLCCL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagcgtcgtcttaccgcaagctgttcgaggatggcagctggagtcgg
agtggagggtcgagtgtgcggtgtgcagggcagtaccgggcctccgtcagggctgcagcc
gttgatgaatgtgaatgtgacaagtttgactttgtagctgccaagagtttgaacaaagag
ggtctgaaccagttcatccaggaacgcaacaccatcgctgtcctcaatgaccgcctggtc
agacttattgaactggctcatagttttgaggaggaaaatgagtctcttgaatgtcaaata
gctgcactggaggaacagctcgccagtagacagacctccagcatcacttccactgtagcg
gtacctgactacagtctggatgcagtggtgcaaagactgcgccagcagagggatcagatt
ctgtctgactcagaggaactaaagagagagcttgaacatctgaagacagagtatgaaaag
gttgcagagcagaggatcttcatccagcaggaccgacaagatgtagccgaggtagtggac
gctgtgacagcagaatgtttggcactgagggagcaagtggcaatctaccaggaacagctg
gacaacatggatgctcagcacaagacggaagtggggagtctgctggagccagatgaaaga
actttgggagcaacagctactaggtttggcagccctgacatcaccccagccttgaatgta
aaggagtactactgccagctggctgagcgcctccagatcgattgcggcgcatcctcctct
gctctcgttcgcagaggtgatggaaaggaagtggaaggaaatgtagcgtcagcagttaaa
gacctgccagacataaatgacgcaggagagttgaagacactgatttcagagctgcaaggg
gagctcgctgagctcgagaaaagtaatgaggagctggaggatgaggtagagatcaaaagg
gctgcatacatggatgaagttgctgagctggagcttactatagatggaataaggcagcag
gaggctgacttcaaagcacagatgaaggagcagtgtgaagagtataaggagctactggat
gagaagatggccagagacatggagattgctgcctacaggagtctggtggaggaggaggag
gacagactgtgctgcctgtga
DBGET
integrated database retrieval system
