Cololabis saira (Pacific saury): 133447209
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Entry
133447209 CDS
T09849
Symbol
hdx
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133447209 (hdx)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133447209 (hdx)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133447209
NCBI-ProteinID:
XP_061581736
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All DBs
Position
7:complement(35678264..35685684)
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AA seq
794 aa
AA seq
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MAAPFPSSSRMDAWPQRRGPQTMNLRSVFTAEQQRILERYYENGMTNQSKSCFQLILQCA
QEAKLDFSVVRTWVGNKRRKLASKVDQNGNVSHSLSSHGLPGGLLSNHTLSGGALSNHSL
AAGALLPADLAAARNIQNRVHLLPPSSSFPSFSSASSSPSSSSPLSSGGNNSNNNDVILT
GIYSLNPTPRSQPRPTAPPSQADSELSAHTSPSLTQVLQSRNNSTSSPIHSKLASLSQTL
PSLTGVSGPLVYTAVRKGTLSIGDGRISAGAGVVPHSWTRQYGTAQTRPWSSSTQSQPQP
QPQPQPQPQPRPHSNPQTQPPAPQKPRVSLPIQTSASEQTPRIQQVFTLSEKVEEDRFRP
GQASGQKSQESHRPAFYPLDTSHNFSIAMETADEEDEWQREEELANMASQTHGDPTSPSP
TGAEVSVVRGGRTPPKPTLLHSNTTLQGSYSLAAQTSHTGESSSQTSLDVSAAPWVISNS
RKRTLQDRTQFSDGDLIQLKRYWDRGMTSLGSVCREKITAAANQLSVDTEIVKTFQNLDI
PNETWISNRRRKYRLMGIEIPPPKGGPAVFSTSSPGNDTPLALSPDGEQLRTPELEDDLN
EGGSVCLSDDGTIDSQHRDGDDGIDVSTAIPLTNNVKIEMIDEDEDVDEDDGELVASDLD
QMQNLLEFKNEEVQFLENELEYQKQKYQELANFTTSLLNAVRNNDLERQQELLASLPQPS
DQDWDMSMEKGDQSDARPNYSEPQIDDASGPDPAQAQSTKQILVVTINKDDTMSDVTETS
ASEDQLQEAATEQK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgttcccctcgagtagcagaatggatgcgtggccacaaaggcgtggcccg
cagactatgaacctgcggtcagtgtttacagctgaacagcagaggatcctggaacgttac
tatgagaatgggatgaccaatcagagcaagtcctgcttccagctaatactgcagtgtgct
caggaggccaagctggacttcagtgttgtgcggacttgggttggtaacaaaagacgaaaa
ctggcctccaaggttgaccagaatggaaacgtgtctcattccctatccagtcatggatta
cctggagggctgctctccaaccacacattatccggaggtgcactatccaatcatagtcta
gcggcaggggcgctacttcctgctgatttggccgcagcacgaaacatccagaatcgcgtg
catcttctccctccatcctcgtcttttccttctttctcgtcagcctcctcctccccttca
tcttcctctcccctcagcagcggaggtaacaacagtaacaataacgatgtaatactgact
gggatctactctctgaaccccacgcctcgctcccagccaagacccaccgccccaccatct
caggcagactctgagctttcagcccacacatctccatctctcacccaggtgctgcagagc
aggaacaattccacttcctcacctatccactccaagctagcgtccctctctcagactctc
ccgtctctcacaggtgtctcaggacctttagtctacactgcagtcaggaaaggcacttta
tccatcggggatggaaggataagtgcaggagcaggggtagtacctcacagctggactaga
cagtatggtacagcgcagactcgcccttggtcctcttccacacagtcccaacctcaacct
cagcctcagcctcagcctcaacctcagcctcgacctcactccaacccccaaactcaacca
cctgccccacagaagcctcgggtctccctccccatccaaacctctgcctctgaacagaca
cctcgtatacagcaagtcttcactctgtcagagaaggttgaggaggaccgatttagacct
ggacaagcgtccggtcagaagagccaggagagccatagaccagcattctaccctctggac
accagtcataacttctccattgccatggaaactgcagatgaagaagatgagtggcaaagg
gaagaggagttggcaaatatggcctctcaaacacacggggatcccacctcacccagccca
acaggggcagaagtgtccgtcgtgagagggggccgcactcctcctaaacccactttgctt
cacagcaacacgactcttcaaggcagctactccctcgcagcacagacctcacacacaggg
gaatccagttcacagacttcacttgatgtgtctgcggccccctgggttatcagcaactcc
agaaagagaacactgcaggatcgtacccaattcagtgatggggacctcatccaactgaaa
cgctactgggacagaggcatgactagcctgggctcagtatgcagggaaaagatcaccgct
gcagccaaccaactcagcgtagacactgaaatagtcaagacttttcaaaatctggatatc
cctaatgagacatggatcagcaacagacggaggaagtaccgtctgatgggtattgaaatc
cctcctcccaaaggtgggccggctgtattctcaacctcatctccaggaaacgacactcca
ctggccctcagtcctgacggagagcagctccgaacgcctgaactggaggatgacttgaac
gaggggggatccgtgtgcctgtctgacgatgggaccattgattcgcaacacagagatgga
gatgatggaatagatgtgtccactgctattccactgaccaataatgtgaagattgaaatg
attgatgaggatgaagatgttgatgaggatgatggggaattagtggcgtcagacctcgat
caaatgcagaacttgctggaattcaagaatgaggaagtgcagttcttagagaacgagcta
gagtaccaaaaacaaaaataccaggagcttgcaaacttcacaacaagcctcctcaacgct
gtgaggaataatgacctggagagacagcaggagctcttggccagcctacctcagccttca
gaccaggactgggacatgtccatggaaaaaggggaccagtcggacgcaaggcccaactac
agtgaaccccagatcgatgatgcgagtggcccggatcctgcacaggcccagtccaccaag
caaatcctggtggtcaccataaacaaagacgatacaatgagtgacgttactgagacctct
gcatcagaggaccagctacaggaagcagcaacggaacaaaagtga
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