Cololabis saira (Pacific saury): 133447233
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Entry
133447233 CDS
T09849
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133447233 (sh3tc2)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133447233 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_8
TPR_2
SH3_2
SH3_9
SH3_1
TPR_MalT
TPR_10
TPR_7
TPR_5
SNAP
ChAPs
Motif
Other DBs
NCBI-GeneID:
133447233
NCBI-ProteinID:
XP_061581808
LinkDB
All DBs
Position
7:37911319..37938318
Genome browser
AA seq
1582 aa
AA seq
DB search
MALISGSRRLLGQMASCCCRPLLSSSCCRLLIKTCLSSFTDISPAELDALWREPPYTIGG
ANEHFSGNDIMTQGEDDNGPAAESGEGAVEHDSYWKKKEAFLRGSTVSLGEKFSSEIVLV
FTGRRRSREDPDRALQESLRTRLRVVESNSKDVMQLFKDLSARLVSVHAEKDSFVLTFKT
VEEIWKFSTYLSLGYVARCLENFLCDQSFWLDQELLRDLEINVTVDEEHLATLYLGLLLQ
EGSFFAKALSTRPEQDGEEEQLQFKKNDLLMVKDTGQEDMWEGTMLSTGLHGLVPVNAMQ
PLPFPFYQWFLRKYPGHAGCSPVEKEQHEHSIVTGSCVAAVDYSPAGADELQLSQGDIVE
VQGLLLRGLAVFVGKHASTGRTGFVHKDHVKPLNIVPLDGQLLFLAEEEKAGLARVNPSS
SEPGDGSLLERLFSSDISSVYRLDRLDETDFMYIRNRPKHDDKIFSTPRQSVVSEKSAGT
LQHQFSTHTSVSHSSPNVSLYHSHNPLPREGERLSFTLEDTFRELDEFQEDPPLFLEENS
WEGEESELSDPTLTLLNLQAFQEDLLPLYDLQYSFLWVTFSGKAEEDLSGHLESVRELCK
RLGLHWAHRRACFLLGRLCARKMKLSQARVYYEEALSVNVDSFSDTPLLVSLFTNLTAVY
LKQRMTDKLPLTLEKASALLLCLPGHNFTSTDEVELLQLLLRRAVVMGDKHLEARVCYLI
ATLFLLLRKFDDALPFVERLQFLSFTLSAPKGGPIAPLDLNWLLSGLYHRKYMPYLALAS
VSLDSRQDHSLPEAFQRIELFIRNSVRLNPCWKEGTSLLPAQIVVYLQQALAVAEQGDDV
KTQRDLCLGLASIYQQYGALDRAVCCAQQAVDTGGHSNEEEGFEASVLLGWLLVLTGQAE
KAQTVLLPLLTSLQSTDSPTQRGVIHNLLALCLRHQGRTREAGGHFYSALVISRESGNQR
NQALALANLGCLALGAGASRVAESFLVRSLCLFLELWESPRRDETDEEHVQTYLWLGRSY
KHSGRSQDVRECYEMGLLIALQARNLHSQMVVAKVLSRLYADMLLYGQSIVYYEHCVSVS
RELKDKRLEGEYLEILSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVG
RIYYLIQEDELADMYLQAAVKTALRMNDPHFAMSIYEETGDVYFKGHRNRMASLPFYRDG
SLPFARSIRDVHSEYRLLSKLTELLMKHGEQEDALQYATLAVQIANQTGASLNERTAYHR
LATIYYNLERYEMAENYYLKSLSLCPPFLQHPKEAHYYTKVYCRLGNLTLHKLKDAVDAL
GYFQLALAAALEDQTNPEALYVVYMKLAELHGNHIPDDELCQVYRGRAHSLKRVLAGGES
SAAGEENVDITSGEAEESSEAHMGYEKSVVGGNFMLEDEKREAAPRTPTVSSESGGRCAD
RNLQDASRRRGHSHCLPETEGPFVDAFGSETDTTASRSYSDSILTESFDTAKEHISDCSS
STDTYQNPADGRDSELESDRSVPSQIPAKQPSDFTDARDTDSDVQDEQNTPTKEKDTRVD
LNPKEEEKSETDSESDANTLRF
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagccggcgactcctgggccagatggcgtcttgctgctgcaga
ccactcctcagctcctcctgctgccgactgctcatcaaaacctgcctctcctccttcaca
gacatatctcctgctgagctggatgctctctggagggagccgccgtacactatcggggga
gcgaatgagcacttctcaggaaatgacatcatgactcaaggtgaggacgacaacggcccg
gctgcagaatcaggagaaggagcggtggagcatgacagctactggaagaagaaggaggcc
ttcctgagaggaagtaccgtctccttaggagagaagttctcttcagaaattgttctggtg
ttcaccgggcggaggcggtccagagaggatccggatcgggccctgcaggagtcgctgcgc
acacgactgcgggtggtggagagcaacagcaaggacgtcatgcagttgtttaaagacttg
tctgcacgtttggtctccgtccacgcggagaaggacagctttgtactcacattcaagact
gtggaggagatctggaagttttcaacctacctgtcattaggctacgtggcccgttgcctg
gagaacttcctgtgcgatcagtcgttctggctggaccaggagctgctccgcgacttggag
atcaacgtcacggtggacgaggagcatctggccacgctctacctgggtctcctgctgcaa
gagggatctttctttgccaaggcgctgtccacgagacccgagcaggacggagaagaagag
cagctgcagttcaagaagaacgacctgctgatggtgaaggacacggggcaggaggacatg
tgggaggggaccatgctgtccacgggactccacggcctggtcccggtcaacgccatgcag
ccgctgcccttccccttttatcagtggttcctgaggaagtatccgggccatgctggatgt
tcacctgtagaaaaggaacagcatgaacactctatcgtgacgggttcgtgtgtagcagcg
gtggactacagtccggccggggccgatgagctccagctgagccaaggggacatcgtggag
gtgcaaggtctgctgctccggggcttggccgtgttcgtaggaaagcacgcttccacggga
cgcaccggctttgtgcacaaggaccatgtcaaacctctgaacatcgtacccctagacgga
cagttgctgtttctggctgaggaggagaaggccggcctggcccgggtgaacccgtccagc
tctgagcccggcgacggcagcctgctggagagactcttctcgtccgacatcagctccgtg
tacaggctagatagactggatgagactgacttcatgtacatccggaaccgtccaaaacat
gacgataagattttttcaaccccccgtcagagcgtggtctcagagaagagcgcagggacg
ctccaacaccagttctccacccacacctccgtctctcactcctctcccaacgtgtccctc
tatcactcccacaaccctctgccgcgggagggagagcgcctgtcctttactctggaggac
accttcagagaactggacgagtttcaggaggacccgcctctcttcctggaggagaacagt
tgggagggcgaggaatctgagctcagcgacccgacgctgactctgctcaacctccaggcc
ttccaggaggatctcctgcccctgtatgacctgcagtattcctttctgtgggtgaccttt
agtggtaaggccgaggaggatctgtcgggacatcttgagagtgtcagggagctttgcaag
agactgggcctgcactgggcccaccgccgagcatgcttcctcctgggcagactgtgcgcc
aggaagatgaagctctcccaggcccgtgtttactacgaggaggctttgagcgttaacgtg
gacagtttttccgacacgccgctcctcgtgtccctcttcaccaacctcacagcggtttac
ctgaagcagcgcatgacagacaaactgcccctgaccctggagaaggccagcgccctgctc
ctctgtcttcccggccacaacttcacgtccacggacgaggtggagctgctgcagctgctc
ctgaggagggcggtggtcatgggggacaaacacctggaggctcgcgtctgctacctcatc
gccacgctcttcctgctcctcaggaagtttgatgatgcgcttcccttcgtggagagactc
cagtttctctccttcactctttctgctcccaaaggggggccgatcgcgccgttggacctc
aactggctcctgagcggcctctatcaccgtaaatacatgccgtacttagcactggcctcc
gtgagcctggactccagacaggatcactctctccccgaggccttccagaggattgagctg
tttatcaggaactcggtccgcctgaacccttgctggaaggagggcacgtccctcctcccc
gctcagatcgtggtgtacctgcagcaggccctggccgtggccgagcagggcgacgacgtg
aagactcagagagacttgtgtctgggcttggcctccatttaccagcagtacggggcgctg
gaccgagcggtgtgctgcgctcagcaggccgtggacacggggggccacagcaacgaggag
gagggctttgaggcctccgtgctgctgggctggctgctggtgctgacgggccaggcagag
aaggctcagacggtcctgctgccgctgctcacctcactccagagcacagacagtcccact
cagcgaggcgtgatccataacctgctggctctgtgtctgaggcatcagggtcgcacccga
gaggcaggcgggcacttctactctgccctggtcatctccagggaaagtgggaaccagagg
aatcaggccctggcgctggctaacctgggctgcctggctctgggcgccggggcgtcccgg
gtggcagaaagcttcctcgtcagatctctgtgccttttcctggagctctgggagagcccc
cggagagacgagacggacgaggagcacgtccagacctacctctggctcgggcgcagctac
aaacacagcgggaggagtcaggacgtcagggagtgttatgaaatggggcttctgatcgcg
ctacaagccagaaacttgcacagtcagatggtggtggcgaaggtgctgagtcgtctgtac
gcagacatgctgctctacggtcagagcattgtttactacgagcactgcgtgtcggtgtcc
agggagctgaaggacaagaggctggagggggagtacctggaaatcctcagcagcctctac
ctctcactcaacacagagaaatcctctcgtaagtctctcgactacaccaagcagagcctg
aggatctctatcgacttgggcaagagagaggaggagtcggagacctggttacaggtgggg
cggatatattacctcatccaggaggacgagctggctgacatgtacctgcaggcagcagtg
aagacagccctcaggatgaatgaccctcactttgctatgagcatctacgaggagacggga
gacgtctactttaaaggccacagaaaccgaatggcgtccctgcctttctaccgggatgga
agtctgccgtttgcacggagcatcagagacgtccactcggagtatcgcttgctaagcaag
ctgacggagctgctgatgaaacacggcgagcaggaggacgcgctgcagtacgccacgctg
gcggtgcagatcgccaaccaaacaggagcgagcctgaacgagagaacggcctaccatcgg
ctggctaccatctactacaacttggagcggtatgagatggcagaaaactactacctgaag
tccctttcgctgtgtcctcccttcctgcagcaccccaaggaggcgcactactacactaag
gtctactgcagactggggaaccttactttgcacaaactcaaggatgcagttgatgcgctg
ggctacttccagctggctctggccgctgctctcgaggaccaaacgaacccagaggctctg
tatgtggtgtacatgaagctggccgagctccacggcaaccacatccctgacgacgagctg
tgccaagtttacagaggcagagcccacagcttgaagagagttctggctggcggggagagc
tctgctgccggagaggaaaatgtggacatcacatctggagaggcggaggagagctccgag
gctcatatgggttacgaaaaaagtgtggtcggggggaattttatgttggaagatgagaag
cgtgaagcagctccgagaacccccaccgtctcctcagagtcagggggcagatgtgcagac
aggaacctgcaagacgccagcaggcgaagaggccacagccactgtctccctgagacggag
ggtccgttcgtggacgcgtttggctctgagacagacaccacggccagtcggtcgtacagc
gacagtattttaaccgagtccttcgacacagccaaggagcacatctcagactgcagcagc
tccacggacacctaccagaatccagccgatgggagagactctgaactggagtctgaccgc
agcgtgcccagtcagatacctgctaaacaaccaagtgacttcacagatgccagagacaca
gattcggatgttcaggatgagcaaaacacccccactaaagagaaagacactcgtgtagat
ctgaatccaaaagaggaagagaaatccgagacggacagtgagtccgacgcaaacactttg
agattttaa
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