Cololabis saira (Pacific saury): 133447256
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Entry
133447256 CDS
T09849
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133447256
04082 Neuroactive ligand signaling
133447256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133447256
Ion channels [BR:
csai04040
]
Ligand-gated channels
GABA-A
133447256
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
133447256
NCBI-ProteinID:
XP_061581843
LinkDB
All DBs
Position
7:complement(38785273..38856585)
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AA seq
454 aa
AA seq
DB search
MSRGSPSSLLLSALALTALWRTRSVKADDTSDAFQTNITLFTRILDSLLDGYDNRLRPGL
GDRVTEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFNGPMNILPLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCP
LKFGSYAYTISEVTYAWTRNASDSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVMT
AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVSEKKKERASVV
KKNNAYAVAVANYAPNIAKDPGSLPTIDKGGATDPGKARTDGKAPESKKTFNSVSKIDRM
SRIMFPVLFGSFNLVYWATYLNREPVIKDMVPST
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggcagcccgtcctcgctgctgctgagcgcgctggcgctcacggctctctgg
agaaccagatcagtgaaagccgatgacacatctgatgcctttcaaaccaacatcacgctg
ttcacacgcatcttggacagcctactggatggatatgacaaccgtctgcggcctggtctc
ggagacagagtaactgaggtgaagacaaacatctatgtcaccagctttggacccgtttca
gacacagacatggagtacacgatagatgttttcttcaggcaaagctggaaggatgagagg
ttaaaatttaatgggccgatgaatattttgcccctcaacaacttgatggcgagtaagatc
tggactccggacaccttcttccacaacgggaagaagtccgtggctcacaacatgaccatg
cctaacaaactgctgaggatcaaggacgacgggacgctgctgtacaccatgaggttaact
gtgcatgcagagtgccccatgcatctggaggacttccccatggacttccattcctgtcct
ctaaagtttggcagctatgcctacacaatctcagaagtgacttatgcttggacccgaaat
gcgtcagactcggtggtggtggaaggcgagagctctcgtctgaaccagtatgacctcctc
ggacaaactgtcggccaagaaactatcaaatccagcacaggtgaatacacagtgatgaca
gctcatttccatctgaagaggaagattggctactttgtcatccagacgtacctcccgtgc
atcatgacagtcatcctctcccaggtgtccttctggctgaacagagaatctgtgccagcc
aggactgtgtttggtgtgaccaccgttctaaccatgaccactctgagcatcagtgcgagg
aactccctgccgaaggtcgcgtatgccactgccatggactggttcattgctgtctgctat
gctttcgtcttctctgccctgattgagtttgccaccgtcaattacttcacaaagcgcggc
tgggcttgggatggaaagagcatcgtgagtgagaagaaaaaagagagggcgtctgtcgtc
aagaagaataacgcctacgcagtagcggtagccaactacgcgcccaatatcgccaaggac
cccggctctctcccaaccattgacaagggtggagcgacagatcccggcaaggccagaacg
gatggcaaggccccagaaagcaagaagaccttcaacagtgtcagcaaaattgacaggatg
tcacggattatgtttccagtgctttttggaagcttcaacctggtgtactgggccacctac
ttaaacagagaacccgttataaaggatatggtcccatctacttag
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