Cololabis saira (Pacific saury): 133447267
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Entry
133447267 CDS
T09849
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133447267 (fmr1)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133447267 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
133447267 (fmr1)
mRNA cycle factors
Stress granule specific factors
133447267 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
Agenet
KH_1
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
133447267
NCBI-ProteinID:
XP_061581871
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Position
7:complement(39485733..39527101)
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AA seq
625 aa
AA seq
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MEELVVEVRGGSGAFYKAFVKDVHEGSVTVAFENNWQPDRQIPFQDVRFPPPTGFSKEIN
ESDEVEVYSRANEKEPCGWWMAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPINPSKP
ATKHTFIKIRLDVPDDLRQMCSKESAHKDFKKAIGAFSVTYDSEKKQLIILSVNEVTTKR
ASMMSDMHFRSLRTKLSLILRNEEASRQLESSRQLASRFHEQFAVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRLARSFLEFSEDVIKVPRNLVGKVIGKS
GKLIQEVVDKSGVVRVRIEPENDKKNSASAAAAAAAAAAASSTTDEGMVPFVFVGTKESI
SNATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGGGGGGGGGAGPRNPKDKTYVFDNGM
GVGMGRGAGGGGGKPYAGGRGGRGRRGGGASFPSGTNSEASNASETESDHKDELSDWSLA
PTEELMAGGGTMPRRTDGRKRPGGAGTRGRGGGRGRGGYKGEDMQWSESRPRHLRDPKTR
AQEDTLQIRVDGNNERSVQHSSAGRGAVGAGPSSSSSQSAVGVGVGVGVGVGGEGPARHH
HQRPLRDRGVKKDKQDTPALVNGVS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggcggcagcggggctttctacaaggcatttgtg
aaggatgttcatgagggttcagtcactgttgcatttgaaaacaactggcagccagatcgg
cagatccccttccaggacgtgcgtttccctcctccaacaggcttctccaaggagatcaat
gaaagtgatgaggtcgaggtttactccagggccaatgagaaggagccgtgtggatggtgg
atggcgaaggttcgcatggtcaaaggagaattttatgtaatagagtatgcagcatgtgac
gcaacgttaaacgagatcgtgacactggaacggttacggcccatcaacccgagtaaacca
gccaccaaacacaccttcattaagatcagactggatgttcctgatgatctacggcagatg
tgctccaaggagtcggcccacaaagactttaaaaaagccatcggagcgttcagtgtcacc
tacgactcggagaaaaagcagctcatcatcctgtcagtgaatgaggtcacgacgaagcgg
gccagtatgatgagtgacatgcacttcaggagccttcgcaccaaactgtcactcatcctg
cgaaacgaagaggccagcagacagctggagagttccagacaactggcatcacggtttcac
gagcagtttgcggtccgggacgacttgatgggtctggccatcggaactcacggcgccaac
attcagcaagcacgtaaagttcccggtgtcactaacatcgatctggatgaggagacgtgc
accttccacatatacggggaggatcaggatgctgtccgtttagccaggagtttcttggag
ttttctgaagatgtcatcaaagttcccaggaacttagtcgggaaggtgattggcaagagt
gggaaactgatccaggaggtggttgataaatctggcgttgtgagggtccggatcgagcct
gagaacgacaaaaagaactcagcttcagctgcagctgcagcggcggcggcggcagcggca
tcatcgacaacagacgagggaatggtgccatttgtctttgtggggactaaagaaagcatc
tccaatgcaaccgtactgctggactatcacctcaactaccttaaggaggtggatcagtta
cgtctggagcgtctccaaatagacgagcagctgagacagataggaggcggaggcggagga
ggaggcggtgcaggaccccgaaaccctaaagataaaacctacgtgttcgataacggcatg
ggtgtggggatgggcagaggagctggaggaggaggagggaagccctacgcaggaggacga
gggggacgagggcggagaggaggaggggcatccttcccctcaggaaccaactcggaagcg
tccaacgcctcagagacggagtcggaccacaaagacgagctcagcgattggtcgctggcc
cccaccgaggagctgatggccggaggagggaccatgcccagacggacagacggcaggaaa
agaccagggggtgcagggacgaggggacgaggaggaggaagaggaagaggaggatataaa
ggggaagacatgcagtggagtgagtccagacctcgtcatctcagagaccccaagacacga
gcccaggaggacaccttacagatccgcgtggacggaaacaacgagcggagcgtgcagcac
tcgtcagccgggcgaggagcggtcggggcggggccgtcgtcgtcgtcctcccagagcgcc
gtcggggtcggggtcggggtcggggtcggagtgggcggcgagggcccggcccgccaccac
caccagagacccctgagggaccggggggtgaagaaggacaaacaggacactccggcgctg
gtgaacggagtgtcgtag
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