Cololabis saira (Pacific saury): 133447278
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Entry
133447278 CDS
T09849
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133447278
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Protocadherins
133447278
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
133447278
NCBI-ProteinID:
XP_061581887
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All DBs
Position
7:40755669..40781705
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AA seq
981 aa
AA seq
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MMVYDAFFFKPSVLLFPAMIVFLIIACLTDEAFSQIRYSVREEADRGTLVGNIAEDLGLD
LTKADSRRFQVVPSSRTPYLQVNLDTGAVSVNERIDREQICKQSPSCQLNMEVFLENPLE
LFRVEIEVMDINDNPPSFPETDITVEISESATPGTRFPLESAFDPDVGANALRTYEITTN
NFFHLDVQTQTDGNKFAELVLEQLLDREQQAVHRYVLTAVDGGAPPRTGTALLRVKVLDS
NDNVPVFDQPVYTVSLPENVPVGTLVIQLNATDRDEGLNGEIVYSLSNHVSTRVKALFGI
EPRTGRLEVRGEVDFEESSLYQIFVQAKDQGPNAVPAHCKVLVKVGDVNDNAPELSFSTV
VDAVGEDAQPGTVIALLSATDRDAGQNGDLHVEILGDVPFKLKSSFKNYFTIVTDGPLDR
ERADSYSVTVMARDKGTPALATSSSIRVQVSDVNDNAPAFTQSVYDVYVTENNVPGAYIH
AVTALDSDTGQNALINYSIMDCDIQGMSVKTYVSINEETGYLYALRSFDYEQIKHFTFMV
QAKDAGTTELSSNTTVKVIIVDQNDNPPLMLAPVGKNGTAKELLPRSAEPGYLVTRLVAM
DADDGENARLSYSIQRGNENGMFRMDWRTGDLRTARRVSSKRDTHQLYDLLVMVRDHGQP
PLSSSTSVLVMLVDSVAEGQGDRDKVGPNKATDNTLDLTLILIIALGSVSFIFLLVMIVL
AVRCQKDKKFNIHTCLVSDCCLDCSTSCSKQDRSRKKKLSKSDIMLVQSNVHVSGTGTPQ
VPIEESGSFGSHHQNQNYCYQVCLTPESAKTDLMFLKPYSPSRSTDTEHNPCGAIVSVYT
DQQPDIISNSSILSNETKHQRTELSYLVDRSRRVNSSAFQEADLVSSKDSGHGDSEQGDS
DHDATNRGHSSAVDLFSNCTEECKALGHSDRCWMPNFVTSEGQQGLDYRINLHVPGMDSV
PDTEQRKECACSFCVDITETA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatggtctatgacgcgtttttctttaagccaagtgtccttctttttccggcaatgatt
gtgtttctaatcatcgcgtgccttacggatgaagcgttttcccagatccgctactctgtc
cgagaagaggcggatcgcggcacgttggtggggaatatcgcggaggatctggggctggac
ctgaccaaagcggattcccggcggttccaggtggtgcccagctccagaaccccgtacctg
caggtgaacctggacaccggggccgtgtcggtcaacgagcggatcgaccgggagcagatc
tgcaagcagagccccagctgccagctcaacatggaggtgttcctggagaacccgctggag
ctgtttcgggtggagatcgaggtgatggatataaacgacaacccgcccagtttccccgag
acggacatcacggtggagatctcggagagcgcgactcccgggacgcgcttccccctggag
agcgccttcgacccggacgtgggcgccaacgctttacgcacgtacgaaatcaccaccaac
aactttttccacctggacgtgcagactcaaacggacgggaacaagttcgcggagctggtg
ctggagcagctgctggacagggagcagcaggccgtgcacaggtacgtgctgacggcggtg
gacggcggcgcgccgccgcgcaccggcaccgcgctactgcgcgtaaaggttctggactcc
aacgacaacgtgccggtgtttgaccagcccgtgtacacggtgagtctccccgaaaacgta
cctgtggggactttagtcatacaactgaacgccacagaccgagatgagggactaaatgga
gaaatcgtgtattccctcagtaaccacgtctccacgcgcgtaaaggcgctgttcggcatc
gagccgcgcaccggccgcctggaggtgcgcggagaggtggatttcgaagagagtagcttg
tatcagatcttcgtgcaggccaaggatcagggtccgaacgccgtgcccgcgcactgcaag
gtcttggtgaaagtcggggacgtgaacgacaacgcgccggagctcagcttcagcaccgtg
gtggacgcggtgggcgaggacgcgcagcccggcaccgtgatcgcgctgctcagcgccacg
gaccgggacgcgggccagaacggggacctccacgtggaaatcctcggagacgtcccgttt
aagttaaagtcctcctttaagaattacttcaccatcgtgacggacgggcctctggaccgg
gagcgggccgactcctactccgtgacggtgatggcgagggataaaggaactcctgctctc
gcaaccagctcctcaatccgcgtccaggtctcagacgtgaacgacaacgcgcctgcattc
actcagtctgtatatgacgtgtatgtgactgagaataatgttcctggggcgtatatacac
gccgtgacagctcttgatagtgacactggacagaatgcactcattaattactccatcatg
gattgtgacatccaggggatgtcagtcaaaacgtatgtgtcgatcaatgaggagacggga
tacctttatgctcttaggtcctttgattatgaacagatcaagcatttcacatttatggtc
caggcaaaggatgcaggtactacggagctgtcctccaacaccacggtcaaagtgatcatt
gtagaccagaatgacaatcccccactaatgctcgctcctgtagggaagaatggaacagcc
aaggagctcctccctcgctccgctgagccaggatacctggtgaccagactagtggcgatg
gatgcagacgacggtgagaacgctcgcttgtcctacagcatccagagggggaatgagaac
ggcatgttccggatggactggaggacgggggacctcaggactgcaaggcgggtgtcatct
aaacgggacactcaccaattgtacgacttgctggtgatggtgagagaccacggccagccc
ccgttgtcctccagtaccagcgtgttggtgatgctggtggacagtgtggctgaaggccag
ggcgacagggacaaagtaggcccaaacaaagccacggataacaccctggacctcacgctt
atcctcatcattgccctcggttctgtctccttcatcttcctcctggtcatgattgtgctg
gcggtgcgctgccagaaggataagaagttcaacattcacacctgcctggtcagcgactgc
tgtctggactgcagcacctcctgctccaagcaggaccggtcccggaagaagaagctcagc
aagtcggatatcatgctggtgcagagtaacgtccacgttagcgggactggtacgccgcaa
gtccccattgaggagtcggggagctttggctcccaccaccagaaccagaactattgctac
caggtatgcctgactccagagtctgccaaaaccgacctcatgttcctgaagccatacagt
ccgtctaggagcacagacaccgagcacaacccctgtggagccatagtgtcagtgtacaca
gaccagcagccggacatcatatcaaacagcagcattttatctaatgagaccaaacaccag
cgcactgagctcagctacctggttgacagatcgagacgtgttaacagttcagcctttcag
gaggccgatctggttagctccaaagacagtggccatggagacagcgagcagggggacagt
gatcatgacgccactaatcgaggccattcttctgctgtggatctattctctaactgcacg
gaggagtgtaaggctctgggtcactctgaccgctgctggatgccaaactttgtgacctct
gaagggcaacagggtctagactaccgcatcaaccttcacgtccccggcatggactcagtc
ccagatacggagcaaagaaaagaatgtgcttgctccttctgtgtggacataacagaaact
gcctga
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