Cololabis saira (Pacific saury): 133447304
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Entry
133447304 CDS
T09849
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133447304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133447304
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133447304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
133447304
NCBI-ProteinID:
XP_061581929
LinkDB
All DBs
Position
7:44900170..44961940
Genome browser
AA seq
762 aa
AA seq
DB search
MELSVRERLAELVEQLTTSGRPQLDQDQMKELKKICRGSDSCIDHMYHLLMTQLDQDHAE
IRLSAFQVASELFTRSHHFRTLLVDNFQEFLELTVETDADQPLPPPKEVAKKLKSLAIQT
VKSWQTSYGSAYKKLALGYHFLKQVKKVDFQDAEARTVAERRRDEERQSRMERIYKARLE
AAAKEMEESYQEIESTLTEMESCMKLLFPDFGPQTAAEGPSDDEQPCCSKNLKASSEEGR
VRMSLDEKKSTGKEVKGDGKMSDTEEEEKCSEDERRADQKKRDGDQQEGEREVETVQGKG
EHEEDEEEAEGSSDEDEEECADEHLFIRNSGLISHSYSLDLDISPGLQVTETEDNEPVVS
MVIELHKLITTKHLPAVQSWVQVFTKAHAEEHVLRRALDLKKSLEAALQKHKELHIDYQS
GRICRVTKAGSDGEEEDDDFDEVPEKEGFEPHIPEHLRAEYGLDPSPSTSKAQVAPPKAP
PAKRPAAPPPPPTSSSHLRRMKRLMEEEQDPTSAAATLRLLKGKIPVPTGPSSSAGPRPS
RSGPEEKTEVPVVPFGLDLYYWGKEQPNAGKIIKSTSQHQFWVPAEVEEEVENQDLLAES
KSRYISFPGRFVPVSHSCRAPLGNGKLCPRQDRLKCPFHGQIVPRDAEGRPCREEDRRRE
EREERKRREEQPEWRDAELMRDIEAATGEDLGSSRITGKKRKGKKKKYPNLSDLKQSSNT
ARSRLQKKVFNKKTVARIAQVMSKVDKRKHDKFSNQFNYAIN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtctgtcagggagcggctggcggagctggtggagcagctgaccacgtctgga
cggcctcagctggaccaggaccagatgaaggagctgaagaagatctgcagagggtccgac
tcatgcatagaccacatgtaccatctgctgatgacccagctggaccaggaccacgctgag
atccggctgtctgccttccaggtagccagtgagctcttcacccggtcccaccacttcagg
actctgctggtggacaacttccaggagttcctggagctgacggtggagacggatgcagat
cagcccctccctcctcctaaagaagtagcaaagaaactgaagtccctggccatccagact
gtcaagtcgtggcagacctcttacggctccgcatacaagaagttagcactcggttaccac
ttcctgaaacaggttaagaaggtggacttccaggatgctgaagccaggacggtggctgag
aggaggagagacgaggagagacagagtaggatggagaggatctacaaggccagattggag
gcagcagctaaagagatggaagagtcgtaccaggagatagagtcgacgctgacagagatg
gagtcctgcatgaagctcctcttccctgactttggcccccagacagccgccgagggtccg
tcagacgacgagcagccctgctgcagcaaaaacctgaaggccagcagtgaagagggaagg
gtacgcatgagcctggatgaaaagaagagcactggaaaggaagtgaaaggagacgggaag
atgagcgatacagaagaagaggaaaaatgctctgaagatgagaggagagcagaccagaag
aaaagagatggagaccaacaggagggggagagagaggtggagactgtgcaggggaaagga
gagcatgaagaagacgaggaggaggcagaaggaagcagtgacgaagacgaggaggagtgt
gctgatgaacacttgtttattaggaactctgggctcatctctcactcctacagtctggac
ctggacatcagtcctggtcttcaagttacagagacagaagacaacgagccagtggtttcc
atggtgatagagctccacaagctcataacaaccaaacacctgccagcggtgcagagctgg
gtccaggtcttcaccaaggcgcacgctgaagagcatgtgttgaggagagcgctggacctg
aagaagtctttggaagccgccctgcagaaacacaaagagctgcacatcgactaccagtct
ggaagaatctgcagagtgacgaaggccggctccgacggagaggaggaggacgacgacttt
gatgaggttccagagaaggaaggctttgagccgcacattcctgaacatctgcgagccgag
tacggtctggatccgtctccttccacctccaaagcccaagtggctcctccaaaagctcct
ccagctaaaaggccggcagctcctccccctccccccacctcatcatcacacctgaggagg
atgaagagactgatggaggaggagcaggatccaacctccgccgccgccacgctgcgcctc
ctcaagggaaagatccctgtgcctaccggaccaagcagctctgctggtcccaggccgtcg
cggtccggtccggaggagaagactgaggttccggtggttccgttcgggctggacctgtac
tactgggggaaggagcagcccaacgccggcaagatcatcaagtcgacctcccagcatcag
ttctgggtccctgcagaggtggaggaggaggtggagaaccaggacctgttagcagagagc
aagagcagatacatctcctttcctgggagatttgttcccgtcagccactcctgcagagcc
ccgctggggaacgggaagctgtgcccacgccaggaccggctcaagtgtccgttccacggc
cagatcgtgccccgggacgcggagggccgaccctgcagggaggaggaccgacggagggag
gagcgggaggagaggaagaggagagaggagcagcccgagtggcgcgacgccgagctgatg
cgcgacatcgaagcggcgacgggagaggacctgggctccagtcggatcaccgggaaaaaa
cggaaaggcaagaagaagaaataccccaacctgagtgacctgaagcagagcagcaacacg
gcccgctcccggctgcagaagaaagtcttcaacaagaaaaccgtggccagaattgctcag
gtgatgagtaaagtggacaagagaaaacatgacaagttctccaaccagttcaactacgcc
atcaactga
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