Cololabis saira (Pacific saury): 133447309
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Entry
133447309 CDS
T09849
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133447309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133447309
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133447309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
133447309
NCBI-ProteinID:
XP_061581940
LinkDB
All DBs
Position
7:45662470..45724488
Genome browser
AA seq
769 aa
AA seq
DB search
MELSVRERLAELVEQLTTSGRPQLDQDQMKELKKICRGSDSCIDHMYHLLMTQLDQDHAE
IRLSAFQVASELFTRSHHFRTLLVDNFQEFLELTVETDADQPLPPPKEVAKKLKSLAIQT
VKSWQTSYGSAYKKLALGYHFLKQVKKVDFQDAEARTVAERRRDEERQSRMERIYKARLE
AAAKDMEESYQEIESTLTEMESCMKLLFPDFGPQTAAEGPSDDEQPCCSKNLKASSEEGR
VRMSLDEKKSTGKEMKGDGKMSDTEEEEKCSEDERRADQKKRDGDQQEGEREVETVQGKG
EHEEDEEEAEGSSEEDEDEAGGSSEEDEEECADEHLFIRNSGLISHSYSLDLDISPGLQV
TETEDNEPVVSMVIELHKLITTKHLPAVQSWVQVFTKAHAEEHVLRRALDLKKSLEAALQ
KHKELHIDYQSGRICRVTKAGSDGEEEDDDFDEVPEKEGFEPHIPEHLRAEYGLDPSPST
SKAQVAPPTKRPAAPPPPPTSSSHLRRMKRLMEEEQDPTSAAATLRLLKGKIPPPPGPSS
SAGPRPSRSGPEEKTEVPVVPFGLDLYYWGKEQPNAGKIIKSTSQHQFWVPAEVEEEVEN
QDLLAESKSRYISFPGRFVPVSHSCRAPLGNGKLCPRQDRLKCPFHGQIVPRDAEGRPCR
EEDRRREEREERKRREEQPEWHDAELMRDIEAATGEDLGSSRITGKKRKGKKKKYPNLSD
LKQSSNTARSRLQKKVFNKKTVARIAQVMSKVDKRKHDKFSNQFNYAIN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtctgtcagggagcggctggcggagctggtggagcagctgaccacgtctgga
cggcctcagctggaccaggaccagatgaaggagctgaagaagatctgcagagggtccgac
tcgtgcatagaccacatgtaccatttgctgatgacccagctggaccaggaccacgctgag
atccggctgtctgccttccaggtagccagtgagctcttcaccaggtcccaccacttcagg
actctgctggtggacaacttccaggagttcttggagctgacggtggagacggatgcagat
cagcccctccctcctcctaaagaagtagcaaagaaactgaagtccctggccatccagact
gtcaagtcgtggcagacctcctacggctccgcatacaagaagttagcactcggttaccac
ttcctgaaacaggttaagaaggtggacttccaggatgctgaagccaggacggtggctgag
aggaggagagacgaggagagacagagtaggatggagaggatctacaaggcaagattggag
gcagcagctaaagatatggaagagtcgtaccaggagatagagtcgacgctgacagagatg
gagtcctgcatgaagctcctcttccctgactttggcccccagacagccgccgagggtcca
tcagatgacgagcagccctgctgcagcaaaaacctgaaggccagcagtgaagagggaagg
gtacgcatgagcctggatgaaaagaagagcacaggaaaggaaatgaaaggagacgggaag
atgagcgatacagaggaagaggaaaaatgctctgaagatgagaggagagcagaccagaag
aaaagagatggagaccaacaagagggggagagagaggtggagactgtgcaggggaaagga
gagcatgaagaagacgaggaggaggcagaaggaagcagtgaggaagacgaggatgaggca
ggaggaagcagtgaagaagacgaggaggagtgtgctgatgagcacttgtttattaggaac
tctgggctcatctctcactcctacagtctggacctggacatcagtcctggtcttcaagtt
acagagacagaagacaacgagccagtggtttccatggtgatagagcttcacaagctcata
acaaccaaacacctgccagcggtgcagagctgggtccaagtcttcaccaaggcgcacgct
gaagagcatgtgttgaggagagcgctggacctgaagaagtctttggaagctgccctgcag
aaacacaaagagctgcacatcgactaccagtctggaagaatctgcagagtgacgaaggcc
ggctccgacggagaggaggaggacgacgactttgatgaggttccagagaaggaaggcttt
gagccgcacattcctgaacatctgcgagccgagtacggtctggatccgtctccttccacc
tccaaagcccaagtggctcctccaactaaaaggccggcagctcctccccctccccccacc
tcatcatcacacctgaggaggatgaagagactgatggaggaggagcaggatccaacctcc
gccgccgccacgctgcgcctcctcaagggaaagatccctccgcctcccggaccaagcagc
tctgctggtcccaggccgtcgcggtccggtccggaggagaagactgaggttccggtggtt
ccgttcgggctggacctgtactactgggggaaggagcagcccaacgccggcaagatcatc
aagtcgacctcccagcatcagttctgggtccctgcagaggtggaggaggaggtggagaac
caggacctgttagcagagagcaagagcagatacatctcctttcctgggaggtttgttccc
gtcagccactcctgcagagccccgctggggaacgggaagctgtgcccacgccaggaccgg
ctcaagtgtccgttccacggccagatcgtgccccgggacgcggaaggccgaccctgcagg
gaggaggaccgacggagggaggagcgggaggagaggaagaggagagaggagcagcccgag
tggcacgacgccgagctgatgcgcgacatcgaagcggcgacgggagaggacctgggctcc
agtcggatcaccgggaaaaaacggaaaggcaagaagaagaaataccccaacctgagtgac
ctgaagcagagcagcaacacggcccgctcccggctgcagaagaaagtcttcaacaagaaa
accgtggccagaattgctcaggtgatgagtaaagtggacaagagaaaacatgacaagttc
tccaaccagttcaactacgccatcaactga
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