Cololabis saira (Pacific saury): 133447369
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Entry
133447369 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133447369
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133447369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133447369
NCBI-ProteinID:
XP_061582027
LinkDB
All DBs
Position
1:complement(53409315..53427209)
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AA seq
1170 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGEHESRGKAQRNKPEPGPGPGPRLVPEPESGPGPSCVSFKS
DRSNDIFINFKGDQHSAVNRVHQKRDSLEHEPSCLSLKSERSNDIFINFKGDQHSSSERV
DQQISESPSGPSVQQHQTQLDSVFQLLEEDIVMFVKNELKKIQRGLGPDYPESLEYLLEG
EDEEQRSSRDAFVKITVNFLRRMKQENLAERLQRTTFAKVCKKRLKSKLKKKSQCVFDGI
VKAGNPTLLKQIYTELYITEGGTGEVNKEHEVRQIEAASRKPHRAETTIRQEDIFKLPPG
RDEPIRTMTTKGVAGIGKTVLIQKFTLDWAEGKANQDIQFLLPFTFRELNVLKERKFSLV
ELVHHFFTETREICSFEEFQVVFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTNLI
RGNLLPSAHLWITTRPAAANQIPPECVSMVTEVRGFANPEKEEYFRKRFREEEQTSRIIA
HIKKSRSLHIMCHIPVFCWITATVLENVMETREGGELPKTLTEMYIHFLVVQAKLKKVKY
DGGAGTDPHWSPESKKMVESLGKLAFEQLQKGKLIFYEPDLRDCGINVREASVYSGVFTQ
IFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFISSGVNLLEEQNNTSWWLKIKSETNL
YQTAVDKALQSPNGHLDLFLRFLLGLSLDTNQTLLRGLLEPKQRISQNNQETVEYIKKKI
SEDLSAEKSINLFHCLNELNNGSLVEEVQESLSSGLLSTDELSPAQWSALVFILLSSEDL
DVFDLKKYSASEEVLRRLLPVVKASKKVVLSGCNLSEDICPLMSSVLSSQSSSLTELDLS
NNHLQDSGLKKLCPGLESPHCHLESLRLSGCNLSKHICADLSSVLSSQSSSLTELDLSNN
HLQDSGLKKLCPGLESPHCHLESLRLSDCLISEEGCASLVSALSSNSSHLRELDLSYNHP
GESAVKLLSAGLKDPRWRLDTLMVEPAGQRWLTPGVQKYSCQLTIDTNTVHNNIQLSDNN
RKMTYVTEDQSYPDHPDRFDFYRQLLCREVLTGRCYWEVQRRGRFEISVSYRRIRRKGDF
IDCLFGRNDHSWSLSCSDDGYYVYHNKRVTCWTPSVSDRVAVYVDVPAGTLSFYIVSSDR
LILLHTFNTTFTEPLYPGFWFSFGSSVSLC
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacggagaggagggagtccctccctctaaaacctctttgtgtggg
gaacatgagagtcggggcaaagctcagaggaataaacctgaacctggacctggacctgga
cctcgactagtacctgaacctgaatccggacctggacccagctgtgtgtccttcaagagc
gaccggtcaaatgatatatttattaactttaaaggagaccaacattctgctgtaaatagg
gtccatcagaaaagagactctcttgaacatgaacccagctgtttgtccttgaagagcgaa
cggtcaaatgatatatttattaactttaaaggagaccaacattcttcttcagagagagtg
gaccagcagatctcagagtcccccagcggtccgtctgtccagcagcatcagactcagctg
gactccgtctttcagctgctggaggaagacattgtcatgtttgtgaagaacgagctgaag
aagatccagaggggtctgggtccagattacccagaatccctagagtatctgttggagggt
gaggatgaagagcagaggagcagcagagatgcgtttgtgaagatcacagtgaacttcctg
aggagaatgaagcaggagaatctggctgagcgtctgcagagaactacttttgctaaagtt
tgtaaaaagcggctgaagtctaagctgaagaagaagtcccagtgtgtgtttgatgggatt
gttaaagcaggaaacccaacccttctgaagcagatctacacagagctctacatcacagag
ggagggactggagaggtcaacaaagaacatgaagtcagacagattgaagcagcatccagg
aaaccacacagagcagaaacaaccatcagacaggaagacatctttaaactcccacctgga
agagatgaaccaatcagaacaatgacgacgaagggagtggccggcatcgggaaaacagtc
ctaatacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccagttc
ctgcttccattcaccttcagagagctgaatgtgctgaaagagaggaagttcagcttggtg
gaacttgttcatcacttcttcactgaaaccagagaaatctgcagctttgaagagttccag
gtcgtgttcatcttcgacggtctggatgagagtcgacttcctctggacttccacaacaat
gaggtcctgactgatgttacagagtccacctcagtggacgtgctgctgacaaacctcatc
agggggaacctgcttccttctgctcatctctggatcaccacacgacctgcagcagccaat
cagatccctcctgagtgtgtttccatggtgacagaggtcagaggctttgctaacccagag
aaggaggaatacttcaggaagaggttcagagaagaggagcagaccagcaggatcatcgcc
cacatcaagaaatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacggtcctggagaacgtcatggaaaccagagagggaggggagctgcccaagacc
ctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaaggtcaaatat
gatggaggagctggaacggatccacactggagtccagagagcaagaagatggtggagtct
ctgggaaaactggcctttgaacagctgcagaaaggaaaactgatcttctatgaaccagac
ctgagagactgtggcatcaatgtcagagaggcttcagtgtactcaggagtgttcacccag
atctttagagaggagagcagcctgtaccaggaccaggtcttctgcttcatccatctgagt
gtccaggagtttctggctgctcttcatgtccatcagaccttcataagctctggagtcaac
ctgctggaggaacaaaataatacatcctggtggttgaaaataaaatcagagactaacctc
tatcagacagctgtggacaaggccttacagagtcctaacggacacctggatttgttcctt
cgcttcctcctgggtctttccctggataccaatcagactctcctacgaggtctgttggaa
ccaaaacaaagaatatcacagaacaatcaggaaacagttgaatacatcaagaagaagatc
agtgaggatctgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaac
aatggttctctggtggaggaggtccaagagtccttgagttcaggacttctctccacagat
gaactgtctcctgctcagtggtcggctctggtcttcatcttactgtcatcagaagatctg
gatgtgtttgacctgaagaaatactcagcttcagaggaggttctccggaggctgctgccg
gtggtcaaagcctccaagaaagttgtgttgagtggttgtaacctctcagaggacatctgt
ccacttatgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagt
aacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacac
tgtcacctggagtctctaaggttgagtggttgtaacctatcaaagcacatctgtgcagat
ctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagtaacaac
cacctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacactgtcac
ctggagtctctcaggctctcagactgtctgatctcagaggaaggctgtgcttctctggtc
tcagctctgagctccaactcctcccatctgagagagctggacctgagctacaaccatcca
ggagagtcagcagtgaagcttttgtctgctggactgaaggatccccgctggagactggac
actctcatggtggagcctgctggacaacgatggttgacaccaggtgtgcagaagtattcc
tgtcaactcaccattgacacaaacacagtccacaacaacatccaactgtctgacaacaac
aggaagatgacgtatgtgacggaggatcagtcatatcctgatcatccagacaggtttgat
ttctatcgtcagctgctatgtagagaagttctgacgggtcgctgttactgggaggtccag
aggagaggaagatttgagatatcagtgagttacagaagaatcagaaggaaaggagacttt
atagactgtttgtttggaaggaacgatcattcctggagtctgtcctgttctgatgatggg
tactatgtatatcacaataagagagtaacatgttggaccccctcagtctctgacagagta
gcagtgtatgtggatgttcctgctggaactctgtccttctacatcgtctcctctgacaga
ctgatccttctccacaccttcaacaccactttcactgaacctctctatcctgggttctgg
ttcagtttcggttcttcggtgtctctgtgttga
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