Cololabis saira (Pacific saury): 133447625
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Entry
133447625 CDS
T09849
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133447625
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
133447625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133447625
NCBI-ProteinID:
XP_061582335
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Position
1:53873657..53903649
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AA seq
436 aa
AA seq
DB search
MMMPFKRQALVEFDGVESATRCVTCGGREAVYIAEQQAFFNFSTSQRITRPTNADDPTSK
NKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRNGIQAMVEFESVEDAQKAKLAL
NGADIYSGCCTLKIEYARPNRLNVVRNDNTSWDYTKPFLLHRERGKGRQRQAILGEHPSN
GYGPQCPLLPLPANSRYRRGEQVQDMISYPPLLPKTFPSTSSSSLLASSSVAMVSGLHPT
KMNCGRIFNLFCLYGNVEKVKFMKSVPGTALVEMGDEYAVDRAVTHLNSIKVFSKKLNVC
VSKQQAVIPSQVFELADGGSSYQDFSLTRNNRFSSAHSSRNIIQPPAAVLHFYNAPPTLS
QHQLLKLCSEHNVPAFTKFKVFDAKPSSKTLSGLLEFDNKTEAVEALTVLNHHQIRIPSS
SNPFTLKLCFSTSSHL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgccgttcaagcggcaggccctggtggagttcgacggcgtggagagcgccacg
cgctgcgtgacctgcgggggccgcgaggccgtctacatcgcagagcagcaggccttcttc
aacttctccaccagccagaggatcacccggcccaccaacgcagacgaccccaccagcaaa
aacaaggtcctgctgctgtccatccagaacccgctgtaccccatcaccaccgatgtgttg
tacaccgtctgcaaccccgtcggtaacgtcctccgcatcgtcatcttcaaacgcaacggc
atccaggccatggtggagtttgagtcagtggaagacgctcagaaggccaagctggctctg
aacggagccgatatttactccggctgctgcacacttaagatcgaatatgctcggcccaac
agactgaacgtcgtccgcaatgacaacaccagctgggattacaccaaacccttcctcctg
caccgagagcgggggaagggaaggcagcgccaagccatcctgggggagcacccgtccaac
ggctacggcccacagtgccccctgctgcccctgccggccaacagcaggtacagacggggt
gagcaggtccaggacatgatctcgtaccctcctctcctcccaaagaccttcccctccacc
tcctcctcctccctgctcgcctccagctccgtcgccatggtgagcggcctccaccccacc
aagatgaactgcggacgcattttcaacctcttctgtctctacggcaacgtggaaaaggtg
aagttcatgaagagcgttcctggcacggcgctggtggagatgggggacgagtacgccgtg
gaccgagccgtcactcacctgaacagcatcaaggttttcagcaagaagctcaacgtctgc
gtgtccaagcagcaggcggtgatccccagccaggtgtttgagctggccgacggcggcagc
agctaccaggacttcagcctgaccagaaacaaccgcttcagcagcgctcacagcagcagg
aacatcatccagccccccgccgccgtgctgcacttctacaacgccccccccaccctcagc
cagcaccagctgctcaagctctgctccgaacacaacgttcctgctttcaccaagttcaag
gtcttcgatgctaaacccagctccaagactctgtccggcctgctagagtttgacaataag
actgaagctgtggaggcgttgaccgtcctcaaccaccaccagatcagaatacccagcagt
tccaaccccttcaccctcaaactctgcttctccacctcctcccatctgtga
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