Cololabis saira (Pacific saury): 133447751
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Entry
133447751 CDS
T09849
Name
(RefSeq) uncharacterized protein LOC133447751
Organism
csai
Cololabis saira (Pacific saury)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
rve
PNMA
rve_3
zf-H2C2
rva_4
Motif
Other DBs
NCBI-GeneID:
133447751
NCBI-ProteinID:
XP_061582462
LinkDB
All DBs
Position
7:1409105..1414175
Genome browser
AA seq
1587 aa
AA seq
DB search
MEGELEELRDLVAQLRAENERLQRERATAAPGTSAAPPSLTEPPPVPSTSSASVMERLIL
VPRDRKCPNFRGRSGLGLEEWIEEAQACMRARHLSPSDQAFFLFDHLEGEPRDEIKHRSS
AERSDPAEIIAALRELYGCSDSYVALQEAFFSRRQQEGETLQEFSLVLMNLMASVKQQAP
SDTLNTDVLLRDQFVENVIDGSLRRELKQLVRRRPFASLLEVRAEAIRWEREGSPGGVWG
RSHSVPSVLGLQCGVQGAPLVEKPSQAGGATNLAILQRNAEQGIIHLALHLQRLLPLSQA
CIMSQLSIRETSARRTAESKFGGGSMVSTITESFFRQHFGSWDQERLQSCHWLRLRAANG
LPIPYLGYLELEVELCGGALPRCGVLVVRDPASADESLHAPGVLGMNILRKCYGMLLGQH
GLALFDLPIITEAPKAVVQALQRCHHAPAGPFSEAAGKVKVRGRKVCRIPGGTMQVVLAT
CSAQYSGTVALFEPSDQGFPAGLLASPALVHVEDGTAHIPIVNVGSSDVLLYPRTVVGVL
SEVRVVSLPPGVEEVSSHTASVVSQVVAPPLPDQVEAVDLSALSYDEQEEARGLLRKHVS
VFSSHDGDLGCTDLISHEIPLLDDAPVRQRYRRIPPSEYEVVKEHINQLLGAQVIRESSS
PFASPIVLVKKKDGSLRLCVDYRQLNSRTRKDAFPLPRIEESLDALTGARWFSTMDLASG
YNQVPVAEADRPKTAFCTPFGLFEWNRMPFGLCNAPSTFQRLMQRIFGDQQCQSLLLYLD
DIVVFSSTFQQHLERLEVVLQRLQQEGLKAKLSKCSFFQREVSYLGHVISASGVSTDPGK
VEVVANWQPPTTILELRSFLGFASYYRRFVEGFAKLAAPLHRLVAELGCSKSKRSRPVSD
KWTSEHQQSFDALKFKLTNAPVLAYADFTLPFILEIDASHGGLGAVLSQEQEGKVRPIAF
ASRGLRPTERNPVNYSSMKLEFLALKWAMAEKFREYLLGHKCLVFTDNNPLSYLSTAKLG
ALEQRWAAQLAAFDFEVRYRPGKNNANADALSRLYPPVAANLETVLPGTSLPPPLKRALQ
TRGPEACQAAVQALPQHLPADIGALQQGDPVLSEVLTFWQQQQYPDQGERRRLSQLAVVL
LKQWDRLTEQAGVIYRKVARPDGGEAVLQVLLPAALKEKVLTEVHQNHGHQGVERTLELL
RQRCYWPGMTADVKRWCQTCERCQVAKDSGPSVRSFMGHLLASEPNEILALDYTMLEPTH
NGLENVLVLTDVFSKYTLAFATRDQRASTVAQVLVTEWFSKFGVPARIHSDQGRNFESAL
IRQLCELYGIEKSRTTPYHPAGNGQCERFNRTLHDMLRTLPASRKRDWHSCLPQVLYAYN
TTPHQSTRESPFFLMFGREARLPVDFLLGRVQAPVGGTVNDWVQEHQSRLHLAFDSVRDR
LKVAAERRKRNHDQTVRSEPLVEGQLVLLRDLGRKGRCKIQDKWNPVVHRVVQAPPGEGP
VYAIAPLDDLAKVKRVHRTLLKAVVGIASPDSDHASPPTPSGQLEIWSRGKRSSNCTSLG
STCSCHRTCAPFPSSILSHVSPRKQRV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagctggaagagttgagggacttagtggcccagctgagggctgagaatgag
aggttgcagcgggagcgggctacggccgcgccgggtactagtgctgcacctcccagtctc
accgagcctccgccagtaccttccacctctagcgcttctgtcatggagagactgatcttg
gtaccccgagataggaagtgtccaaacttcaggggtaggtcaggtctagggctagaggag
tggatagaggaggctcaggcatgcatgagagctcgccatctgtccccatccgatcaggca
ttttttcttttcgaccatttggagggagagcctcgtgatgagatcaaacatcggtctagc
gcagagaggagtgacccagctgaaattattgctgctctgcgggagctgtatggttgttct
gactcgtacgttgctttacaggaggccttcttctcacgacgccagcaagaaggggagact
cttcaggagttctccctggtgctcatgaatctgatggcttctgtgaagcaacaggctcca
agcgacacgctaaataccgatgttttgctgcgggaccagttcgttgagaatgttatcgac
ggttcccttcgtcgagagctgaagcagcttgtacgcaggcggccgtttgcctccctgctt
gaggtaagggcggaggcaattagatgggagagagaggggtcgccgggaggtgtgtggggc
cggagccattcggttccctcggtgctgggtttacagtgtggtgttcagggtgcccctctg
gtggagaaaccatcccaggctggcggtgccaccaacctggccattttgcaaaggaatgca
gagcagggcataatccacctcgccctacatctgcagcgcctgcttcctctcagccaggca
tgcattatgagtcagctcagcattcgggaaactagcgcccgccgaactgcggagtcaaag
ttcggaggggggtctatggtttccaccattacggagagcttcttccggcaacacttcggg
tcttgggaccaagagaggcttcagtcttgccactggttacgtctcagagcggctaatggg
ttgcctataccctacctcggttacctggagcttgaagtcgagctttgtggtggggcgttg
ccacggtgcggggtattggtggtcagggaccctgcgtcggctgatgaatcccttcatgcg
cctggtgttttggggatgaacatcctgcggaaatgctacgggatgctgcttgggcaacat
ggtctcgccctatttgacttacccatcattacagaagcaccaaaggctgtggtgcaggca
ttgcagaggtgccatcacgcccctgcgggccctttttctgaagctgctggtaaggtcaag
gtgcgaggccggaaggtttgccgcatccctggtggcaccatgcaggtggttctggctacc
tgttctgcacagtactccggcactgtggcgctttttgagccctcagaccagggatttccc
gctggcctgctggcctccccggcactggttcacgttgaggacggtactgcacacatcccc
attgtgaacgtgggttcttccgacgtgctattgtacccacgaacagtggtaggtgtcctt
agtgaggttcgtgtggtaagcttgccccctggtgtagaggaggtttcgtctcatacggcc
tctgtggtttcccaggtcgtggctcccccactaccagatcaggtggaggcggtcgatttg
tcagccctgtcttacgacgaacaagaagaagcgcgaggtcttcttcggaaacatgtctct
gtcttttcatctcacgatggtgacttgggctgcactgatttgatttcccacgaaattcct
ctcttggatgacgcccccgtccgccagcgttaccgtcgtattccaccgtcagaatacgaa
gtggttaaagagcatatcaaccagctgctgggcgcacaggtcatccgcgaaagcagcagt
ccttttgcctcaccgattgtgctggttaagaaaaaggatggcagcctgcggttgtgcgta
gactaccgacagcttaacagccggacaaggaaggatgccttccctcttcctcgtattgag
gagtcacttgacgcgttgaccggagctcgttggttctccactatggatttagccagtggc
tataatcaggttccagttgcggaggccgaccgacccaagacagctttttgtactccgttc
gggctgttcgagtggaaccgcatgccctttgggctgtgtaacgcgcctagcaccttccag
cggctcatgcagaggatttttggagaccagcaatgtcagtccctgcttttatatctagat
gacattgtggttttctcctctacctttcaacaacatctggagcgtctggaggtggtgctg
cagcggttacaacaggagggcctgaaggctaagctgtccaagtgctcctttttccagcga
gaggtcagttatttggggcatgtcatctctgccagtggtgtttccactgatccgggcaaa
gtggaggtggtagccaactggcagccccccaccaccatcttggagttgcggtccttcctc
ggttttgcaagctactatcgccgctttgtggaggggttcgccaagttggctgcccctcta
caccgtcttgtggcagaactggggtgctctaagtccaagaggtcacgtccggtgtcggac
aagtggacgtcagaacatcagcagagctttgatgccttaaagtttaagctcaccaatgcc
cccgtgcttgcctatgccgactttaccctccccttcatcctggagatagacgccagtcat
ggaggcttgggagcggtactctcacaggagcaggagggaaaggtgcggcctatagcattt
gccagccgaggtttgaggccgacagagcgcaacccagttaattatagctccatgaagcta
gagtttctggctttaaagtgggcaatggcggaaaaattccgtgagtacttgcttgggcac
aagtgtctggttttcacggataataatccccttagctatttgtccacagctaaacttggt
gcactggagcaacgctgggcagctcagctggcagctttcgatttcgaagttcgctaccgc
cctggtaagaacaatgccaatgcagatgccctgtcccgcttgtacccccctgttgcagcg
aacctggaaactgtactccctggtacgtcacttccaccacccttgaagcgagctctacaa
actcgagggcccgaagcttgtcaggctgctgtccaagctctgcctcagcaccttcctgct
gacattggcgcacttcagcagggtgatcccgtgctttcagaggtgttgacgttttggcag
cagcaacaatatcccgaccagggcgaacgcaggcggctgtcccagctagcggtggtgctt
ctcaaacagtgggataggctgactgaacaagcgggggtgatttacagaaaggttgcacgg
cccgatggtggagaagccgttctccaggtgctgttaccggctgcgttaaaggagaaggtc
cttaccgaggttcaccaaaaccatggccaccaaggtgtagagaggaccttggaattacta
aggcagcgttgctactggccgggtatgactgccgatgtgaagcgttggtgtcaaacctgt
gagcggtgccaggtggccaaggactccgggccatcggtccgaagcttcatgggacatctg
ctagcctcagagccaaacgaaattttggctttggattacaccatgcttgaaccaacccat
aacgggctggagaatgtccttgtgctgaccgacgtcttcagcaaatacacccttgccttc
gccactcgtgaccagagagcttctactgtggcccaggtcctagtcaccgagtggttctcc
aagtttggtgttccagcacgaattcattcggaccaaggtcggaacttcgaaagtgcgctc
attcgacagttatgtgaactgtatgggattgaaaagtcccgtacgactccgtaccatccc
gctgggaatgggcaatgcgagcgtttcaaccgcacgctgcatgacatgctgcgcaccctt
ccagcctctcgaaaaagagactggcattcttgtctaccacaggtactgtatgcctataac
accactccccaccaatcgactagggagtcaccctttttccttatgtttggccgtgaggca
aggctcccagttgatttcctgttggggagagtgcaggcccctgttggtgggactgtaaac
gactgggtgcaagaacaccagtcccggttgcatctggcctttgacagtgttcgagatagg
ttaaaagtcgcagctgagcgccggaaaaggaaccatgatcagactgtccggtctgaaccc
ctggtggaaggtcagttagtgctgttgcgagaccttggcaggaaaggtcgttgtaagatc
caggacaagtggaatccagtggtgcacagggtggttcaggctcccccgggagaaggtccc
gtgtacgccattgctccactggatgaccttgccaaggtcaagcgggtgcaccgcacgctg
cttaaggcagtcgtggggattgcttccccagacagcgatcatgcttctcctcctacccca
tctggccagctggaaatctggtccaggggaaagagaagctccaactgcaccagccttggc
tccacctgcagctgccacaggacttgtgccccctttccatccagcatcctcagccacgtc
tcccccagaaagcagagggtctga
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