Cololabis saira (Pacific saury): 133448218
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Entry
133448218 CDS
T09849
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133448218 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133448218 (nfasca)
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
L1 family
133448218 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_C17orf99
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
133448218
NCBI-ProteinID:
XP_061582531
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All DBs
Position
8:complement(601839..668385)
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AA seq
1375 aa
AA seq
DB search
MEDRGSGATTMSGPGGRVVALTLLSFLLPWQETASIEVPQDQKILLDLKQPPTITKQSVK
DYIVDPRDNIIIECEARGNPVPMFQWRRNGKVFSTGKDPRVTMRKRSGTLEISFRNGGRP
EDYEGEYQCYASNDYGDALSNKILLRVSKAPLWPKEVLEPVSVLEGSPLVLHCNPPPGLP
PPYIFWMDSGMFPIRQDKRVSMGLNGDLYFSNVRVQDAETDYCCNARFLFTHTIQQKNPF
TLKVQTSRRVAETTPTFLSPAGAESNKMVLRDEELLLECIAAGLPTPTIKWFKKGGDLPA
PKVRLEKFNKTLRIVGVSEEDAGEYVCMANNQLGSIRHSIYVQVKAAPYWLDQPVNLILA
PEENGRLICRAGGNPKPDIQWLVNGQPVESSAPNPNRQVIGDTIIFRSVQIGSSAVYQCN
ASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIRNNRTFLDCPFFGSPLPALRWFKNGQ
GSGLDGGHYRVHINGSLEIKRAQTEDEGTYTCVANSILGKVENQVRLEVKEPTRIIRAPV
HQSATRGSTARFDCQVKSDPSLPVTVTWTKEGKDLRLGWRVKADQESLTISKVEQSDEGV
YSCTAKSAIDQDWAAARLTMLEEASLHPSVSSALPAARPDPPIDLELSDPAARSIRLTWI
PGNDNRSPVSEFRVQFEEDKWEPGRWQNLSSFPGDLNSVVLQLLPFVNYKFRVIAVNALG
ESQPSRTSPRYKTSGAAPDAVPRGLRGWGSRKDNMEITWEPLLDLEKNGPNLHYSVSWRR
KDSGSDWNNVSSFSFVHVVSDTDTYVPYEIKVQARNDFGAGPESNVVVGWSGEDKPSEAP
ADLRVSNVDATTANVHWKPVDPESVQGEFKEYRLYYWRENSLVPGLQVSKEKKTRGFYTT
VKEPSGILTDLVPFSTYKMFMVTANSRYEGPPSNKLEFSTREGVPDAPSFFSIKPRHLDS
LHLEWEEPLEPNGILTGYQLEYQTVNGSELGPSKQLTFPPNVTEFLLRLPDRNTRYRFFL
SARTRVGAGEVYADDSTHFTNDANFTEVKVNLTDASVSSFTATPPPLAPLPPTTVAATTA
SPSTTAATTTTTAATTTTATSTTTAAPTTTTSTTTTSTTTTTEATTTTTRSAPATRRPDL
NVWAVPVMEIWNLTVESFSDSANVSWKSSFPPGGSEFVLELTLDSDNPVKVITVKQAPTM
VKDLVAGATYHLRVYSHELNSVSSPTVVFTTKTAYVDQVDVATQGWFIGLMCAVALIILI
LLIVCFIKRSRGGKYPVRDKKDLPLDPVDQKDQDGSFDYHSDEDNKPLASQTSLDGNVKE
SDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDGETEGNESSEATSPVNAIYSLA
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgaggatcgggggcgaccaccatgtctgggccgggcggccgtgttgtggcc
ctgactctgctgtccttcctgctgccgtggcaggaaacggcgtccatcgaggttccacaa
gaccaaaagatcctgctggacctgaagcagcctcccaccatcaccaagcagtcagtgaag
gattacatcgtggatcccagagacaacatcatcatcgagtgtgaagcccgaggaaacccc
gtccccatgttccagtggcggcggaacgggaaggtgttctccaccgggaaggacccgcgg
gtcaccatgaggaaacggtccgggactctggagatcagtttcaggaacgggggccggccc
gaggactacgagggcgagtaccagtgctacgctagcaacgactacggggatgccctgtcc
aacaagatcctgctgcgggtgtccaaggctccgctgtggcccaaggaggttctggagccg
gtgtcggttctggagggttccccgctggttctgcactgcaaccccccgccgggcctgccc
cccccctacatcttctggatggacagcggaatgttcccaatccggcaggacaaacgggtc
tccatgggcctgaacggggacctttacttctccaacgtccgggttcaagacgccgagacg
gattattgctgcaacgctcgcttcctgttcacccacaccatccagcagaagaacccgttc
accctcaaggtccagaccagccggagggtagcggagaccacgcccactttcctttcacct
gccggagccgagagcaacaagatggttctgagagacgaggagctgctgctggagtgcatc
gctgctggcctgcccactcccaccatcaagtggttcaagaagggcggggatctcccggcc
cccaaggtccggctggagaaattcaacaagacgctgcggatcgtcggcgtgtcggaggaa
gacgccggcgagtacgtgtgcatggccaacaaccagctgggcagcatccgccactccatc
tacgtgcaggtcaaagccgccccctactggctggaccagccggtgaacctgatcctggcc
ccggaggaaaacggccggctcatctgccgcgccggcgggaaccccaaaccggacatccag
tggctcgtcaacggacaaccggtggaaagctccgcccccaaccctaacagacaggtgatt
ggcgacaccatcatcttccgctcggtccagatcggcagcagcgccgtttaccagtgcaac
gcgtccaaccagcacggctacctgctggctaacgccttcgttagcgtcctcgacatgcct
ccgaggatgttgggtcccaagaaccagctgatcaaggtgatccggaacaaccgcaccttc
ctggactgtccgttcttcgggtcgccgctgccggcgctgcgctggttcaagaacggccag
ggcagcgggctggacggaggccactaccgggtccacatcaacggctccctggagatcaaa
cgggcccagacggaggacgagggaacctacacctgcgtggccaacagcattctgggaaaa
gtggagaaccaggtccggctggaggtcaaagagccgacccggatcatccgcgcccccgtc
caccagtcggcgacccgcggctccacggcgcggttcgactgccaggtgaagtcggacccg
agtctccccgtcaccgtcacctggaccaaggagggcaaggacctgcggctgggatggagg
gtgaaggccgaccaggaatctctcaccatctccaaggtggaacagagcgatgagggagtt
tattcctgcacggctaaatctgccatcgaccaggactgggcggcggcgcggctcaccatg
ctagaggaagcctccctccacccctccgtctctagtgccttgcctgcagcccggccagac
ccccccatagacctggaactgtcagatccagcagctcgaagtatcagactcacctggatc
cctggaaatgacaaccggagccccgtctcagagttccgggtccagttcgaggaggataag
tgggaaccgggccggtggcagaacctgtccagcttccccggagacctgaactccgtcgtc
ctgcagcttcttcccttcgtcaactacaagttcagggtcatcgccgtcaacgcgctgggc
gagagccagccgagcaggacgtcgccgcgctacaagaccagcggggcagctccagacgct
gttccccgaggcctgaggggttggggctccaggaaggacaacatggagatcacctgggag
ccgctgctggacctggagaagaacgggccgaacctccactacagcgtctcctggagacgg
aaggattccggttccgactggaacaacgtcagcagcttctccttcgtccacgtcgtctcc
gacaccgacacctacgtcccctacgagatcaaggtccaggcccggaacgacttcggggcc
ggacccgagtccaacgtggtggtcggctggtccggggaggacaaacccagtgaggccccc
gcggatctccgagtctccaacgtggacgccaccacggccaacgtccactggaaacccgtg
gacccggaatccgtccagggggagttcaaggagtaccggctgtactactggcgggagaac
agtctggttccggggctgcaggtcagtaaggagaagaagacgagaggtttctacacgacg
gtgaaggaaccgagcggaatcctcaccgacctcgttccgttttccacctacaagatgttc
atggtgacggcgaacagtcgctacgaaggcccgccgagcaacaagctggagttcagcacc
agggagggcgttccagacgctccgagcttcttcagcatcaaaccccgacacctggactcc
cttcacctggagtgggaggagcctctggagcccaacggcattcttactggctaccagctg
gaataccagacagtcaacgggtcggaactcggcccctccaagcagctgacgtttcccccc
aacgtgacggagttcctgctgcgcctgccggaccgaaacacccgctaccggttcttcctg
tcggcccggacgcgggtgggggcgggcgaggtctacgccgacgactccacccacttcacc
aacgatgcaaactttaccgaagttaaagttaatcttaccgacgcctccgtgtcttctttc
actgctactcctcctcctctcgctcctcttcctcccactaccgtcgctgctacgacggct
agcccctcaactaccgccgctactactacaacaaccgctgctactacaacaaccgctacc
tcaactaccaccgccgctcctacgactaccacgtccacgactaccacgtccaccaccacg
accaccgaggctaccaccaccaccacgcgatcggcgccagccaccaggcggcccgatcta
aacgtgtgggccgtgcccgtcatggagatctggaacctgacggtggaatcgttcagcgac
agcgctaacgtcagctggaagagcagcttccctcccggcggcagcgagttcgtgctcgag
ctaacgctggacagcgacaacccggtgaaggtcatcacggtgaaacaggcccccaccatg
gtgaaggacctggtcgccggggcaacgtatcacctgagggtttactcgcacgagctgaac
agcgtcagcagcccgaccgtcgtcttcaccaccaagacagcctacgtggaccaggtggac
gtggccacccagggctggttcatcggactcatgtgcgccgtcgccctcatcatcctcatc
ctcctcatcgtctgcttcatcaagaggagccggggcggcaagtacccagtgcgagataag
aaagacctcccgctggacccggtggaccagaaggaccaggacggatccttcgactaccac
agcgacgaggacaacaagcccctggccagccagacgtcgctggacggcaacgtgaaggag
agcgacgacagcctggtggactacggcgagggcggcgacggccagttcaacgaggacggc
tccttcatcggccagtacaccgtcaagaaggacaaggacggggagacggagggcaacgag
agctccgaggccacctcgcccgtcaacgccatctactcgctggcgtag
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