Cololabis saira (Pacific saury): 133448239
Help
Entry
133448239 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133448239
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133448239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
133448239
NCBI-ProteinID:
XP_061582569
LinkDB
All DBs
Position
8:2096904..2114424
Genome browser
AA seq
1176 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGEHESRSKAQRNQPGPGPGPAPAPGPGPRPEPEHGPSCVSL
KSDRSKGWLIEFKRDQRSAVKRVHQKGDSLEHEPSCLSLKSDWSNERLIEFKGDQQSSER
VDQQISESPSGPSVQQHQTQLDSIFQLLEDNIVLFVKNELKKIQRGLSPDYPESLEHVLE
GEDEEQRRSSREAFVKITVNFLRTMKQEELAEHLQSSSFSAVCKKRLKSKLKKKSQCVFE
GIVKAGNPTLLKQIYTELYITEGGTGDVNVEHEVRQIEAASRKPHRAETTIRQEDIFKLP
PGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWTEGRINQDIQFLLPFTFRELNVLKDRKFS
LVQLVHHFFTETREMCSFEEFQVVFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTN
LIRGNLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTDPQKEEYFRKRFRKDKSTKII
SHIKTSRSLHIMCHIPVFCWITTTVLENVLETREGGELPKTLTEMYIHFLVVQAKLKKVK
YDGGAETDPHWSPESRKMIKSLGKLAFEQLQKGNLIFYEPDLRECGIDVRKASWYSGVFT
QIFREERSLYQDQVFCFIHLSVQEFLAALHVHRTFIKSGVNLLEEKRNTSRWFKKRAETD
LYQSAVDKTLQSPNGHLDLFLRFLLGLSLETNQTLLRGLMEPKQRSSKNNQETVEYIKKK
ISEDLSAERSINLFHCLNELNDRSLVEEVQRSLRSGRLSTDELSPAQWSALGFILLSSGD
LEVFDLKKFSASEEVLRRLLPVVQASKKVLLNDCNLSGDICPLLSSVLSSQSSSLTELDL
SNNHLQDSGLKKLCPGLESPHCHLESLRLSCCNLSGNICPLLSSVLSSQSSSLTELDLSN
NHLQDSGLKKLCPGLESPHCHLESLRLSGCLISEEGCASLVSALSSNPTHLRELDLSYNH
PGESAGKLRSAGLEDPRWRQDTLRVEPAGQQWLTPGLRKYSCQLTIDTNTVNNNIQLSDN
NRKMTRMGGYQSYPDHPDRFDSWPQLMCREVLTGRCYWEVQWRGGVSVSVSYRRIRRKGG
SDDCVFGWNDHSWSLSCSDDGWYSVCHNNRVTSSSSSSSVCDRVAVYVDVPAGTLSFYSV
SSERLIHLHTFNTTFTEPLYPGFGFWSDSGSSVSLC
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacctgca
cctgcacctggacctggacccagacctgaacctgaacacggacccagctgtgtgtccttg
aagagcgaccgttcaaagggctggttaattgaatttaaaagagaccaacgttctgctgta
aagagggtccatcagaaaggagactctcttgaacatgaacccagctgtttgtccttgaag
agcgactggtcaaatgaaagattaattgaatttaaaggagaccagcagtcttcagagaga
gtggaccagcagatctcagagtcccccagcggtccgtctgtccagcagcatcagacacag
ctggactccatctttcagctgctggaggacaacattgtcctgtttgtgaagaacgagttg
aagaagatccagaggggtctgagtccagattacccagaatccctagagcatgtgttggag
ggtgaggatgaagagcagaggaggagcagcagagaggcgtttgtgaagatcacagtgaac
ttcctgaggacaatgaagcaggaggagctggctgagcatctgcagagcagttctttttca
gcagtttgtaaaaagcggctgaagtctaagctgaagaagaagtcccagtgtgtgtttgag
gggattgttaaagcaggaaacccaacccttctgaagcagatctacacagagctctacatc
acagagggaggaaccggagacgtcaacgttgaacatgaagtcagacagattgaagcagct
tccaggaaaccacacagagcagaaacaaccatcagacaggaagacatatttaaactacca
cctggaagagatgaaccaatcagaacagtgatgacgaagggagtggccggcatcgggaaa
acagtcctaacacagaagttcactctggattggactgaaggcagaatcaaccaggacatc
cagttcctgcttcctttcaccttcagagagctgaatgtgctgaaagacagaaagttcagc
ttggtgcaacttgttcatcacttcttcactgaaaccagagaaatgtgcagctttgaagag
ttccaggttgtgttcatctttgacggtctggatgagagtcgacttcctctggacttccac
aacaatgaggtcctgactgatgttacagagtccacctcagtggacgtgctactgacaaac
ctcatcagggggaacctgctcccttctgctcgtctctggatcaccacacgacccgcagca
gccaatcagatccctcctgagtgtgtctccatggtgacggaggtcagagggttcactgac
ccacagaaggaggaatacttcaggaaaaggttcagaaaagacaagtccaccaaaatcatc
tcccacatcaagacatcacggagcctccacatcatgtgccacatcccagtcttttgctgg
atcactactacggtcctggagaacgtcctggaaaccagagagggaggggagctgcccaag
accctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaaggtcaag
tatgacggaggagctgagacggatccacattggagtccagagagcaggaagatgatcaaa
tctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaacca
gacctgagagagtgtggcatcgatgtcagaaaggcttcatggtattcaggagtgtttacc
cagatctttagagaggagagaagcctgtaccaggaccaggtcttctgcttcatccatctg
agtgttcaggagtttctggctgctcttcatgtccatcggaccttcatcaagtctggagtc
aacctgctggaggaaaaaagaaacacctccaggtggtttaaaaaaagagcagagactgac
ctctatcagagtgctgtggacaagaccttacagagtccaaacggacacctggacttgttc
ctccgcttcctcctgggtctttcactggagaccaatcagactctcctacgaggtctgatg
gaaccaaaacaaagaagttcaaaaaacaatcaggaaacagttgagtacatcaagaagaag
atcagtgaggacctgtctgcagagagaagcatcaacctgttccactgtctgaatgaactg
aatgatcggtctctggtggaggaggtccaacggtccctaaggtctggacgtctctccaca
gatgaactgtctcctgctcagtggtcagctctgggcttcatcttactgtcatcaggagat
ctggaggtgtttgacctgaagaagttctcagcttcagaggaggttctacggaggctgctg
ccagtggtccaagcctccaagaaagttctgttgaatgactgtaacctctcaggggacatc
tgtccacttctgtcctcagtcctcagctctcagtcctccagtctgacagaactggacctg
agtaacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtcca
cactgtcacctggagtctctcaggttgagttgttgtaacctctcagggaacatctgtcca
cttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagtaac
aaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacactgt
cacctggagtctctcaggctgtcaggctgtctgatctcagaggaaggctgtgcttctctg
gtctcagctctgagctccaaccccacccaccttagagagctggacctgagctacaaccat
ccaggagagtcagcagggaagcttcggtctgctggattggaggatccccgctggagacag
gacactctcagggtggagcctgctggacaacaatggttgacaccaggtctgaggaaatat
tcctgtcaactcaccatcgacacaaacacagtcaacaacaacatccaactgtctgacaac
aacaggaagatgacacgtatgggggggtatcagtcatatcctgatcatccagacaggttt
gattcctggcctcagctgatgtgtagagaagttctgacgggtcgttgttactgggaggtc
cagtggagagggggagtttctgtatctgtgagttacagaagaatcagaaggaaaggaggc
tctgatgactgtgtatttggatggaacgatcattcctggagtctgtcctgttctgatgat
ggttggtactctgtctgtcacaataacagagtaacatcttcctcctcctcttcctccgtc
tgtgacagagtagcagtgtacgtggacgttcctgctggaactctgtccttctacagcgtc
tcctctgaaagactgatccacctccacaccttcaacaccacattcactgaacctctctat
cctgggttcgggttctggtctgattctggttcttcagtgtctctgtgttga
DBGET
integrated database retrieval system
