Cololabis saira (Pacific saury): 133448241
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Entry
133448241 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 4C-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133448241
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133448241
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
NOD2_WH
LRR_4
LRR_1
PRY
AFG1_ATPase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133448241
NCBI-ProteinID:
XP_061582570
LinkDB
All DBs
Position
8:2208867..2225706
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AA seq
1109 aa
AA seq
DB search
MDWLIKFKSDQHSAVKRVHQKGDSLEHEPSCLSLKSDMSNERYFNFKGDQQSSSERVDQQ
ISESPSGPSVQQHQTQLDSIFQLLEDNIVMFVKNELKKIQRGLSPDYPESLEHLLDDEDE
EQRSSDAFLKITVNLLRRMKQEELAERLQRSSFSAVCKKRLKSKLKKKYQCVFEGIVKAG
NPILLEQIYTELYITEGGTREVNDEHEVRQIEVACRKPDRAETAIRQEDIFKPPAGRDEP
IRTVMTNGVAGIGKTVLTQKFTLDWAESRTNQDIQFLLPFTFRELNVLKDRKFSLVELVH
HFFTEIREICSFEEFQVVFIFDGLDECRLPLDFHNNEVLTDVTESTSVDVLLTNLIRGNL
LPSARLWITTRPAAANQIPPECVSMVTEVRGFTNPQKEEYFRKRFREDEQTSRIISIIKT
SRSLHIMCHIPVFCWITAMVLENVLENVPETREGGELPKTLTEMYIHFLVVQAKLKMVKY
DGGAETDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQ
IFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFIKSGVNMLEEQRSTSRWYKTRAETDL
YQTAVDKALQSPNGHLDLFLRFLLGLSLETNQNLLRGLMKSKQRSSKNNQETVKYIKEKI
SEDLSAEKSINLFHCLNELNDRSLVEEVQRSLRSGRLSTDKSPAQWSALVFILLSSEDLE
VFDLNKYSASEEALRRLLPVVKASKKVLLRGCNLSEDICPLLSSVLSSQSSSLTELDLSN
NRLQDSGLKKLCPGLESPHCHLESLRLNDCNLSGNICPLLSSVLSSQSSSLTELDLSNNH
LQDSGLKKLCPGLESPHCHLESLRLSGCNISEDICPLLSSVLSSQSSSLTELDLSNNHLQ
DSGLKTLCPGLESPHCHLESLRLSSCLITEEGCASLVSALSSNPSHLRELDLSCNHPGES
AVKLLARLEDPRWKLDTLRVEPAGQRWLTPGLRKYSCQLTIDTNTVHKRIQLSGNNRMMM
FVMEDQSYPDHPDRTPESHVAETVLNDSLEPSSSSGPLKVEAAVIPGSTCVSSVCFQSEL
HGEHQHVSLQLSLAEISQLQLVCCTCDQL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggactggttaattaaatttaaaagtgaccaacattctgctgtaaagagggtccatcag
aaaggagactctcttgaacatgaacccagctgtttgtccttgaagagcgacatgtcaaat
gaaagatattttaactttaaaggagaccagcagtcttcttcagagagagtggaccagcag
atctcagagtcccccagtggtccgtctgtccagcaacatcagacacagctggactccata
tttcagctgctggaggacaacattgtcatgtttgtgaagaacgagctgaagaagatccag
aggggtctgagtccagattacccagaatccctagagcatctgttggacgatgaggatgaa
gagcagaggagcagcgacgcatttttgaagatcacagtgaacttactgaggagaatgaag
caggaggagctggctgagcgtctgcagagaagttctttttcagcagtttgtaaaaagcgg
ctgaagtctaagctgaagaagaagtaccagtgtgtgtttgaggggattgttaaggcagga
aacccaatccttctggagcagatctacacagagctctacatcacagagggagggacccga
gaggtcaacgatgaacatgaagtcagacagattgaagtagcatgcaggaaaccagacaga
gcagaaacagctatcagacaggaagacatctttaaacccccagctggaagagatgaacca
atcagaacagtgatgacgaatggagtggccggcatcgggaaaacagtcctaacacagaag
ttcactctggactgggctgaaagcagaaccaaccaggacatccagttcctgcttcctttc
accttcagagagctgaatgtgctgaaagacagaaagttcagcttggtggaacttgttcat
cacttcttcactgaaatcagagaaatctgcagctttgaagagttccaggtcgtgttcatc
tttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgaggtcctgact
gatgttacagagtccacctcagtggacgtgctgctgacaaacctcatcagggggaacctg
ctcccttctgctcgtctctggatcaccacacgacccgcagcagccaatcagatccctcct
gagtgtgtctccatggtgacggaggtcagagggttcactaacccacagaaggaggaatac
ttcaggaagaggttcagagaagatgagcagaccagcaggatcatctccatcatcaagaca
tcacggagcctccacatcatgtgccacatcccagtcttctgctggatcactgctatggtc
ctggagaacgtcctggagaacgtcccggaaaccagagagggaggggagctgcccaagacc
ctgactgagatgtacatccacttcctggtggtccaggctaaactgaagatggtcaagtat
gacggaggagctgagacggatccacactggagtccagagagcaggaagatggtggagtct
ctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaaccagac
ctgagagagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacccag
atctttagagaggagagcagcctttaccaggaccaggtcttctgcttcatccatctgagt
gttcaggagtttctggctgctcttcatgtccatcagaccttcatcaagtctggagtcaac
atgctggaggaacaaagaagcacttccaggtggtataaaacaagagcagagactgacctc
tatcagacagctgtggacaaggccttacagagtccaaacggacacctggacttgttcctc
cgcttcctcctgggtctttcactggagaccaatcagaacctcctgcgaggtctgatgaaa
tcaaaacaaagaagttcaaaaaacaatcaggaaacagttaaatacatcaaggagaagatc
agtgaggacttgtctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaac
gatcggtctctggtggaggaggtccaacggtccctgaggtctggacgtctctccacagat
aagtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagatctggag
gtgtttgacctgaataaatactcagcttcagaggaggctctacggaggctgcttccagtg
gtcaaagcctccaagaaagttctactgaggggttgtaacctctcagaggatatctgtcca
cttctgtcctcagttctaagctctcagtcctccagtctgacagaactggacctgagtaac
aaccgcctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacactgt
cacctggagtctctcaggttgaatgactgtaacctctcagggaacatctgtccacttctg
tcctcagttctcagctctcagtcctccagtttgacagaactggacctgagtaacaaccac
ctgcaggattcaggactgaagaagctgtgtcctggactggagagtccacactgtcacctg
gagtctctcaggttgagtggttgtaacatctcagaggacatctgtccacttctgtcctca
gttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcag
gattcaggactgaagacgctgtgtcctggactggagagtccacactgtcacctggagtct
ctcaggctgtcaagctgtctgatcacagaggaaggctgtgcttctctggtctcagctctg
agctccaacccctcccacctgagagaactggacctgagctgcaaccatccaggagagtca
gcagtgaagcttctggctagactggaggatccccgctggaagctggacactctcagggtg
gagcctgctggacaacgatggttgacaccaggtctgaggaagtattcctgtcaactcacc
atcgacacaaacacagtccacaaacgcatccaactgtctggcaacaacaggatgatgatg
tttgtgatggaggatcagtcatatcctgatcatccagacagaacacctgaatcacacgtt
gctgaaactgtcctgaatgattccttggaaccttcttcctcttccggtcctttaaaggtg
gaagctgccgttattccaggatccacatgtgtttcttccgtctgtttccagtcagagctt
cacggtgaacaccagcatgtttctctgcagctcagtttagctgagatcagtcagctgcag
ttagtttgctgcacatgtgaccaactgtga
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