Cololabis saira (Pacific saury): 133448315
Help
Entry
133448315 CDS
T09849
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00450
Selenocompound metabolism
csai00970
Aminoacyl-tRNA biosynthesis
csai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
133448315 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133448315 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csai01007
]
133448315 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133448315 (mars1)
Enzymes [BR:
csai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
133448315 (mars1)
Amino acid related enzymes [BR:
csai01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133448315 (mars1)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133448315 (mars1)
Prokaryotic type
Other AARSs
133448315 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_N_3
GST_C
GST_C_2
GST_N_2
HTH_23
tRNA-synt_1e
GST_N_4
DUF16
Motif
Other DBs
NCBI-GeneID:
133448315
NCBI-ProteinID:
XP_061582703
LinkDB
All DBs
Position
8:complement(10102212..10131974)
Genome browser
AA seq
914 aa
AA seq
DB search
MKLFVSEGNPHCLKVKAALEVTGVRCSVEYFNHEEKVVPFLNRPAFPALLLPNGQYLFSS
NTICRYLFEVNGQECSDVCNQWLEWEATVLQPALLQAPQKPVQGKPSGVSQVLPGLLNVM
DQSLSKGGMPYLSGEFLSVADVVLWAALHPVLSDSSLALGEHKCLKAWFDRIAVMRSSQS
GFEKALQGNGPQAMKSHMQRQPTPPSTQGNPAESEESERVVSEEEMEATALKWSKGLDAC
APETEKQHPILPQEGKRNILLTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWNLLF
VCGTDEYGTATENKAREEGLTPQQICDKYHAVHASIYKWFQIDFDFFGRTTTEKQTEIAQ
NIFWRLHKNGFLVEDTVEQLRCEKCQRFLADRFVEGTCPHCSYPEARGDQCDKCGRLINA
VELREPQCKVCRQTPEIRSSKHLFLDLPKLETQLDQWLDKSTSTGDWTSNAKQITRSWLR
DGLKPRCITRDLLWGTPVPHPDFKDKVFYVWFDAPIGYLSITANYTSEWEKWWKNPQQVE
LYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFGDMA
KDTGIPSDVWRFYLLFVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGMFVTKFFEG
RVPVMELQQEDKKFLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQVNEPWKK
IKGGDSERQRAGTVTGVSVNISCLLSVMLFPYMPAVSQTIRNQLNMPHSCINSMLRGTGT
FVCVLSAGHRIGTVSPLFQKLEPDQIEALKKRFGGQQPEDEPSNKKRPSTAQPADAAPAV
GPEVKTEVGVDAEKAKELTKAVTEQGEKVRALKAQKAEKGVITAEVSKLLDLKKQLAVAE
GKNPEPSSQKGKKK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtttgttagcgaaggcaacccgcactgcctgaaggtgaaagctgcgctggaa
gtgactggagttcgatgcagcgttgaatatttcaaccacgaagagaaagtggtgcctttc
cttaaccgtccagcttttccagcgctgctactgcccaatggacagtatctttttagctcc
aacaccatttgcaggtacttatttgaagtaaatggacaagaatgcagtgatgtttgcaat
cagtggctggaatgggaggccacagttcttcagcctgcactgctacaggctcctcaaaag
ccagtgcaggggaaaccatcaggcgtgtcccaggtccttccaggtctcctgaacgtcatg
gatcaaagcttaagcaaaggaggaatgccatatttaagtggggaatttttgtcggttgct
gatgttgttttgtgggccgcgctgcaccctgttttatctgactcttcacttgcactgggt
gagcataagtgtttgaaagcttggtttgaccgtatagctgttatgcgcagtagtcaatcc
ggttttgagaaagcgctgcagggaaacggcccgcaggctatgaagagccacatgcagagg
caacctacacctccgagcacccagggcaaccctgccgagagcgaggaaagtgagcgtgtt
gtttcagaggaagagatggaagcaactgctctcaagtggagtaaaggtttggatgcttgt
gctccagagacagagaaacagcaccccattttgccacaggagggtaagcgaaacatcctt
ttgaccagtgccttgccatatgtcaacaacgtcccccacctgggtaatatcatcggttgt
gttctcagtgctgatgtcttctcaaggtatggccggctgcgaggctggaatctgttgttt
gtgtgtggcacagatgagtatggcacagcgacggagaacaaggccagagaagagggcctg
acaccccaacagatctgcgacaagtaccatgctgttcatgccagcatctacaaatggttc
cagattgactttgacttttttggcagaaccaccactgaaaagcagacagagatagctcag
aatattttctggcgactccacaagaatggatttctcgtggaagacaccgtggagcaactg
cggtgtgaaaagtgtcagcgtttcctggctgaccgcttcgttgaaggcacgtgtccccac
tgcagctacccggaagctcgtggtgaccagtgtgataagtgtggccgcctcatcaacgct
gtggagctcagggaacctcagtgtaaggtctgcaggcaaactccagaaatccgctcctcc
aaacatcttttcctggaccttccaaagttagaaactcagttggaccagtggttagacaag
tcaaccagcacaggagactggacatcaaatgccaaacagatcacgcgcagctggttaagg
gatggactgaagcctcgctgcatcaccagggacctgctctggggaacaccggtgcctcac
cctgactttaaagacaaggtgttctatgtgtggtttgatgcccctattggttatctgtcc
attactgcaaactacaccagcgaatgggaaaagtggtggaaaaatcctcagcaggtggag
ctgtacaatttcatggccaaagacaatgtgccatttcacagtgtggtgttcccctgctcc
ctactgggagcccaggacaactacactctggtcaaccaccttgtggctactgaatatctc
aactacgaggacacaaagttttccaaaagccgtggcgtgggtgtgtttggagacatggca
aaggacacgggaatcccgtccgatgtttggcggttctacctcctgtttgttcgtccagag
ggacaagattcagctttctcttgggctgacatggcactgaagaacaactctgagctgctc
aacaatctagggaacttcatcaacagagctggcatgtttgtcactaagttctttgaggga
cgtgtccctgtgatggagctccagcaggaggataagaagttcctggctgtggtcgggtgg
gagctgcagcagtacatccagctcatggacaaagtcaaaatacgtgatgctctcaagcac
atcctgaacatttctcgtcatggcaaccagtacattcaagtcaatgaaccatggaaaaag
atcaagggaggagactcggaaaggcagcgtgctggcacggtcacgggtgtttctgtgaac
atttcctgcttgctgtcagtgatgctcttcccttatatgccggcggtcagccaaaccatc
aggaatcaactcaacatgccacattcttgcatcaatagcatgctgcgaggaactggcacc
ttcgtatgtgtcctgagtgcaggccaccgtatcggcactgtcagtcccttattccagaaa
ctggagccagaccagatagaggctttgaagaagagatttggtggacagcagcccgaagat
gaaccatctaataagaagcgcccgagcacggcccagcctgccgacgccgctcctgctgtc
ggccctgaggtgaagacagaggtcggagtggacgcagagaaagccaaggagctcacgaag
gctgtgaccgaacagggggaaaaagtgcgagcactcaaagctcagaaggcagagaagggg
gtaattacagcagaggtgtccaaactactggacctcaagaaacaactggctgtggctgag
gggaagaaccctgagccttcatctcagaaaggcaagaaaaagtga
DBGET
integrated database retrieval system
