Cololabis saira (Pacific saury): 133448323
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Entry
133448323 CDS
T09849
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00260
Glycine, serine and threonine metabolism
csai00630
Glyoxylate and dicarboxylate metabolism
csai00670
One carbon pool by folate
csai01100
Metabolic pathways
csai01200
Carbon metabolism
csai01230
Biosynthesis of amino acids
csai01240
Biosynthesis of cofactors
csai04981
Folate transport and metabolism
Module
csai_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
133448323 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
133448323 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
133448323 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
133448323 (shmt2)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
133448323 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
133448323
NCBI-ProteinID:
XP_061582723
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Position
8:10819189..10857712
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AA seq
499 aa
AA seq
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MLSFALKQLTRPLCQRAPVRLSVRLQHAATRVVDEDRPWTGQDSLAEDDPEMWALLQKEK
DRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKRAL
DAFDLDPEKWGVNVQPYSGSPANFAVYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKRIS
ATSIYFESMPYKLNAATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCTDI
NAYLLADMAHISGLVAGRAVPTPFEHADLVTSTTHKSLRGARAGLIFYRKGLRSVDKKGK
EIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYISQVLRNAKTMAGAL
LSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLR
LGAPALTSRQFKEDDFVQVVEFMDEGFKIALDVKKKTGKLQNFKDFLLQDPETVARIADL
RHRVEAFARPFPMPGFKDH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgaagcaactcacacggccgctatgccagcgggcccctgtccgg
ctcagtgtacgtctccagcacgctgccactcgtgtcgtggatgaagatcgtccttggact
gggcaggacagtctggctgaggatgaccccgaaatgtgggctctgctgcagaaggagaag
gacaggcagtgccgtggtctggagctcattgcatctgagaatttctgcagccgagcagct
ctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccagggagacgg
tactatggtggtgcagaagtggtcgaccaaatcgagctgctttgtcaaaagcgagcactg
gacgcctttgacctggacccagagaagtggggtgtcaacgtccagccgtactctggctct
cctgctaactttgcggtctacacggccgtgctcaaaccccatgaccgcatcatgggcctg
gaccttcctgatggaggacacctgacccatggttacatgtctgatgtgaagaggatctct
gcgacatccatttattttgagtccatgccctacaagttaaatgctgcaacaggactcata
gactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatcgctggc
accagtgcctatgcccgcctcattgactatgcccgcatcaagaagctatgcaccgacatc
aatgcctacctgcttgctgacatggctcacatcagcgggctggtggcgggcagagccgtc
cccacgcccttcgagcacgctgacctggtcacctccaccactcacaagtccctgcgagga
gccagggctggcctcatcttctaccgtaaaggtcttcgctcagtggacaagaagggaaag
gaaatcatgtacgaccttgaggacaaagtcaacttctcagttttcccctcgctgcagggt
ggacctcacaaccacgccatcgctggcgttgctgtggcgcttagacaggcacagtctccg
atgttcaaggaatacatttcccaggtactgaggaatgccaagaccatggctggagctctt
ctcagcaaaggctacacactagtatcaggtgggaccgacaaccacctggtcttggtggac
ctgcggcccaagggcatcgacggggcccgagctgagagggtgttggagctcgtctcaatc
accgccaataagaacacctgccccggggacaagagcgccctgacccccggcggtctccgg
ctcggtgctccagctctgacctccagacaatttaaagaagatgactttgtgcaagttgtt
gagtttatggacgaaggcttcaagattgccttggatgtgaagaagaagacaggaaagctc
cagaacttcaaggacttcctgctccaggacccagagacggtggctcgcatcgccgacctg
cggcaccgcgtcgaggcgttcgccaggccgttccccatgcccgggttcaaagaccattag
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