Cololabis saira (Pacific saury): 133448356
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Entry
133448356 CDS
T09849
Symbol
asic1b
Name
(RefSeq) acid-sensing ion channel 1B isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133448356 (asic1b)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
133448356 (asic1b)
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Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
133448356
NCBI-ProteinID:
XP_061582779
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Position
8:13016025..13279158
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AA seq
556 aa
AA seq
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MPVRIMCTISFSTDDEPSGGFDDHYKRVHRGYGDGDSRDYLNRCSQGEDDTDEEDDVGEV
DDLAAFFDGCSLHGANHVFVENKKFGIRQGLWALVFSLALAAFLYQIAGRIIYYLQYDRI
TLLDEREASNMTFPAVTICNYNFIRKSQMSYSDLIFMGPLLGFEDGMAPGFPLAPEPDRL
QGTPFSLDEFYNRTRHRMEDMLLDCKFRASECGPENFREIFTRYGKCYTFNSGQDGRPLL
VTMKGGMGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHTQDEPPFIDQLGFGVAP
GFQTFVSCQEQRLTYLPPPWGDCKATPMDSDFFNTYSLTACRIDCETRYLVENCNCRMVH
MPGDAPYCTPEQYKECADPALDFLVEKDNERCTCETPCNLTRYGKELSFVKIPSKASAKY
LAKKFNKTEQYISDNILVLDIYFEALNYETIEQKKAYELAGLLGDIGGQMGLFIGASILT
VLELFDYLYEVIKYKLCRCMKKKHKSRNNNDRGAVLSLDDVKHHAPCENLRTTPSTYPGN
MLPHHPAQSNFEDFTC
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgaggataatgtgcaccatctccttttccactgatgacgagcccagcggagga
tttgatgaccactacaagcgtgtccacaggggctacggtgacggagactcgcgggactac
ctgaacaggtgcagtcagggggaggatgacaccgacgaggaggacgatgtgggcgaggtg
gacgacctggccgctttcttcgacggctgctcgctccacggagctaaccacgtgttcgta
gagaacaagaagttcggtatccgccagggtttatgggcgttggtcttcagcttggccctg
gccgccttcctttaccaaatagccggcagaatcatatactacctccaatacgaccgcatc
accctgctggacgagagggaggccagcaatatgaccttccccgccgtcaccatatgcaat
tacaactttatccggaagtcccagatgagttacagcgacctgattttcatgggaccctta
ctgggcttcgaagacggcatggcgccggggtttccgctggccccggagccggaccgcctg
cagggcacacccttcagcctggatgagttttataaccgcacccggcatcgcatggaggac
atgctgctggactgtaaattcagggcttcagaatgtggccctgagaacttcagagagata
ttcacacgctatgggaaatgttacacgttcaattcaggccaggatggacgacccctgctc
gtgacgatgaaggggggcatgggcaacggcctggagctgatgttagatatccagcaggac
gaatacctgccagtatggggagagactgacgagacatcatttgaagcggggatcaaagtt
cagatccacacccaggacgagccgccgttcatagaccagctgggctttggagtggcgccg
gggttccagacctttgtctcctgtcaggagcaacggctgacgtacctgcctccgccttgg
ggggactgcaaggccacacctatggactctgatttcttcaacacatacagcctcaccgcc
tgcaggattgactgcgagacacgatacctggtggagaactgcaactgcaggatggtccac
atgcccggagatgccccatactgcaccccggagcagtacaaggagtgtgccgaccctgcc
ttggactttcttgtggagaaagacaatgagcgctgtacgtgcgagacgccgtgcaacttg
acacgatacggtaaagagttgtccttcgtgaagatacccagcaaggcatcggccaagtat
ctcgccaagaagtttaacaagaccgagcagtacatatctgataacattttggtcttggat
atctactttgaagctctcaactacgaaaccattgagcaaaagaaagcctacgaattggca
ggccttctgggtgatattggaggacagatgggtctcttcatcggcgccagcatcctcacc
gttttggagctcttcgattatttgtatgaggtgatcaagtacaagctgtgcagatgtatg
aagaagaaacacaaaagccgcaacaacaacgaccgaggagccgtgctgagcctggacgac
gtgaaacaccatgctccctgcgagaaccttcgcacgacaccgtcaacatatcccgggaac
atgctacctcaccatccggcccagagcaactttgaggacttcacgtgctga
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