Cololabis saira (Pacific saury): 133448432
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Entry
133448432 CDS
T09849
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133448432 (arhgef10la)
03036 Chromosome and associated proteins [BR:
csai03036
]
133448432 (arhgef10la)
Membrane trafficking [BR:
csai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133448432 (arhgef10la)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133448432 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
CFAP43_N
IQ_SEC7_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
133448432
NCBI-ProteinID:
XP_061582934
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All DBs
Position
8:complement(17582967..17747644)
Genome browser
AA seq
1290 aa
AA seq
DB search
MSDPLPHQPIKDNEEEDDEEQGEEFVFEDSEDEEKPGKNIAPDCVGPVQESKKEETETSG
GVSATPPELPKSPTPAGPEGVTTADDAASSTTADVPVTESPSWASEAAAEAKPGSSAPHG
GEELRGLPAVPSAEETVETTGDNGKEGSSKSGDISEAVSLAEADPQGARASDVIYDDVPS
EDPVSPDEDMIYEDVQRDANTLKANNGWSSSEFESYDEQSDSEAKQPARSKLSPEVRRLR
ERCARTKRELAMRLSGKHNYDIKVQQLMKAARSGTKDGLERTKIAVMRKVPFLQRKDQME
EEDDAGYLDVAVSEVKHPPPQLSPMPEGLTSHQVVRRHILGSIIQSERSYLESLRRILQE
YHRPLLEADPRILSPRKIRPIFHRVREITQCHSMFQIALASRVAEWDSNEKIGDLFVASF
SKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSVDRITLYGLMVKPIQR
FPQFILLLQDMLKNTPKGHVDRLPLQLALTELEMLAEKLNEQKRVADQVAETQQLARSVS
DRLLSKQLNLEQGSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANINVKGPPDI
SSLVPVGPKYTMKWSAPLQQVQVVEVGQEGPQNKDTLFQQSGTKRPSSICTSGKALLGPP
RLYQELQELQHDLSVVEEVTLLVGTLQGTYQNLNTTVAQDWCLALQRLIRIKEEQIQCAN
KCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKIALREENSPGWLCGED
EGKTISPFWSPLLASHMPVFATKSQERKLEAALHNPVHCAMLGFSAASTSLPQGYLWVAG
GGEGSQGHIEIFSLNRPLPRSVKSLPVGSAVRCLEYVPAPSPSEDFEAGAHKPPSGISTS
ICAGLDDGRILVYGSLDTAAQCLLTLHNPEGCPVLCLKHSARFLFAGLRNGSVIVYGRNN
SDELWDPDSSRCVSLGSEPVRTMLVLDESLWASCGNSVTAIEMPSITTKKFEVHPDPMVS
VAHMACAGGGVWMAFSEGSSIRLFHTETLELLQEINVSTRSTLLSTGQKSMRVTSLLICQ
GLLWVGTAQGFIITLPVPKLEGIPKIKGKGKISLNAHCGPVDFLVASSSTLSPELLKRDS
IGESPDSACGGEDRSDTSSQESLQQSSSSKGEEKGKGRGVLLQYKLRSTSGLPGWPLTAQ
GDEASDSSLESLEHSVEDGSIYELSDDPELWVRGRSCERESARRDRVISAAVISGGKGFR
RIKEGAAAGARASGDSLENILMVWQLPLTV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccgctgcctcaccaacctataaaagacaacgaagaggaggacgacgaggag
caaggggaagagtttgtgtttgaagacagcgaggatgaagagaaacccggtaaaaacatc
gcccccgactgcgttggacccgtccaagagtccaaaaaggaggaaactgagacatcaggc
ggggtgtcagcgacaccaccagagcttcctaaatcaccaactcctgctggaccagagggc
gttaccaccgccgatgacgcagcctcaagtaccaccgcagatgttccagttaccgagtca
cccagctgggcctcggaagcagcagcggaggccaagcccggttcttcagctccacacggg
ggggaggagctccgggggcttcccgcggtgccatcagccgaggagacggtggagacgacg
ggagacaacggcaaagaggggagctccaagtcgggggacatctctgaagctgtaagtctg
gccgaagccgacccgcagggagcccgggcttcagacgtgatctacgacgatgttcccagc
gaggaccccgtctctccggatgaagatatgatctacgaagacgtgcagcgagacgccaac
actctgaaggccaacaacggctggagctccagtgagttcgagagctacgacgagcagtcg
gacagcgaggccaagcagccggcgaggagcaagctctctcctgaagtgcgccggctgagg
gagcggtgcgccaggaccaaacgcgagctggccatgaggctgtcgggaaaacacaactat
gacatcaaggttcagcagctcatgaaggcggcgaggagcggaacgaaggatgggcttgag
agaaccaaaatagccgtcatgaggaaagttcccttcctgcagagaaaagatcaaatggag
gaggaggatgatgctggatatctggatgtggctgtgtcagaagtgaagcatcctcccccg
cagctgagccccatgccagaggggctaaccagccaccaggttgtcaggcgccatatcctg
ggctccatcattcagagcgagcggagctacctggagtctctcaggaggatcctgcaggag
taccacaggccgttgctggaggctgatccgcgcatcctgagtccgaggaagatccgaccc
atcttccaccgggtccgagagatcacgcagtgccactccatgttccagattgcgctggcc
tcccgcgtggccgagtgggacagcaacgagaagatcggtgacctgttcgtcgcctcgttc
tccaaatccatggttctggatgtgtatagtgattacgtgaataacttcaccaacgccatg
gctctcattaaaaaggcgtgcatgtccaaaccggcgtttctggaattcctcaagaagaag
caggcgtccagcgtcgaccggattaccctgtacggcctgatggttaagcccattcaacgc
ttcccgcagttcattttgctcctgcaggacatgcttaagaacacaccgaagggccacgtg
gatcgcctccctctgcagctggccctgacggagctggagatgctggccgagaagctgaac
gagcagaagcgagtggccgaccaggtcgctgagacgcagcagctagcccgcagcgtcagc
gaccgcctgctcagtaagcaactgaacttggagcaggggtcactggtcctatgtgagacg
cttattgagactgtgtatggagaacggggacaagtcctgaagtcaaaggagagaaaggtc
ttcctctttgatgatgtgctcatctgtgccaacataaatgtcaaggggcctccggacatc
agcagcctggtccccgttggccccaaatacaccatgaaatggagcgcccccctgcagcag
gtgcaagtagtggaggttgggcaggaaggccctcaaaacaaagacaccttgttccagcag
agtgggactaagaggccgagtagcatctgcacttcaggtaaagctctcctgggcccgcca
cggctgtaccaggagctgcaggagctgcagcacgacctttccgtggtggaggaggtcact
ctcctcgtgggtacgctgcaggggacgtaccagaacctgaacaccaccgtggcgcaggac
tggtgtctggctctgcagaggcttatccgcatcaaagaagagcagatccagtgtgcgaac
aagtgtcgcctacgcctgcaggtgcccggcaggccagacaagtccggacgtcctgtcagt
tttatggtggtcttcaatacgcccagccctctcagtaagatctcctgggtcaaccgtctg
cacttggccaagatagcactacgagaggagaactcgccaggctggttgtgtggagaagat
gaagggaagaccatatcgccgttttggtctccgctgctcgcctctcacatgccagtcttt
gctacaaagtcacaagagcgaaagctggaagcagccctccataaccctgttcactgtgcg
atgttgggcttctctgcagcgagtacctctctacctcagggctacctctgggtggcaggt
ggaggagaaggttctcaaggccacatcgagatattttccctcaacaggcccttacccagg
tccgtgaagagcctgccggtaggctccgccgtccgctgtctggagtacgttccagcaccg
tctccgagcgaggactttgaggcgggagctcacaagcccccttcagggatcagcaccagc
atctgcgctggattagatgatggccgcatcctggtttacgggagtctggacactgcggcg
cagtgcctgctgaccctccataacccagagggctgccccgtgctgtgcctgaaacactcg
gcccgcttcctgttcgccgggctgcggaacggctccgtcatcgtttatggaaggaacaac
agcgatgagctgtgggatcccgactcctcccggtgcgtgagtctggggtcggaacccgtc
cggacgatgctggtgctggacgagtcgctgtgggccagctgtgggaactcggtcacagct
atagaaatgcccagcatcaccacgaagaaatttgaagtccatcccgacccgatggtcagc
gttgcacacatggcgtgcgccggaggaggcgtgtggatggcgttctcagagggttcctcc
attcgtctctttcacacggaaacactggagcttctgcaggaaatcaacgtctcaacgcgc
tcgacgctgctcagcactggtcagaagagcatgcgagtcacaagcctgctaatttgccaa
ggactgttgtgggtgggaacagctcaaggcttcatcatcactctgccggttcccaaactg
gagggcatccccaagataaaagggaaggggaagatctctctcaacgcacactgcgggcct
gtggacttcctcgtggcctcttccagcacgctgtctcccgagctcctgaagagggattcc
atcggggagagcccggactcggcctgcgggggggaggaccgcagcgacacctcgtcccag
gagtcgctgcagcagtccagctcctccaagggagaggagaaaggtaagggccgcggcgtc
ctgctgcagtacaagctgcgctccacctcagggctgcccgggtggccgttaacggcgcag
ggagacgaggcgtccgactcctccctggagtctctggagcacagcgtggaggacggatct
atctacgaactcagcgacgatccagagctgtgggttcggggacgttcttgtgagagggag
tcggcccgcagggacagggtgatctccgcggccgtcatatccgggggaaaaggttttcgc
cggattaaagaaggagccgccgcaggtgcaagagcaagcggagactctttagaaaatatt
ctaatggtatggcagctcccgctgacggtgtga
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