Cololabis saira (Pacific saury): 133448440
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Entry
133448440 CDS
T09849
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133448440 (chd5)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133448440 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
GSIII_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
133448440
NCBI-ProteinID:
XP_061582952
LinkDB
All DBs
Position
8:complement(17752357..17816770)
Genome browser
AA seq
1995 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPFTPLSSFFADEDSLKQEKKKKPKKMK
EGKISKVKKRKKEGLQTRVDSDLEETSEVEEEQGRLEMCSESESSAYGSTKKKKKKPREK
KEKKPRKKKRDGEDDEDDDDDGNMKEPKSSSQLMHEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSFSSSQLSAPLGPIKKAKTKEGKGPGVRKKSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQRILHWTWGEPPLPAELPPGPDGRPADPLSKPPLKGRPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELANEKRKSKDPQYAVMEERFYRYGI
KPEWMVIHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYDTYKALYWDHREQ
ILGEDQRPLVVRKGIKLKEDHPKREIPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVLTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGSSLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARAMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSEKDKPL
PPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEREFRAYV
SLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKLSSPD
LIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPVPAEKTESFLGSAEDKETAEQDGKK
LLEQEPASSAEPTSAPERAADGEEGKAGPEDKAADEKSRTESPSCKNDPSVNSKESAFKQ
AELLSGHTPPKMDHCKETEKSSDRRDAAGSPLEKAEDKENKPDDVKSEDMLEGRLNGDKD
TLDEMDDGRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHRRHDYW
LLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIE
EQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPANAVLHKVLNQ
LEELLSDMKADVTRLPNMLSRIPPVSSRLQMSERSILSRLTSRGNEPPPQQPFSQGGFGC
SQMYSSNFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGAPLPTSHLDKKSLDSLRDVATP
DLKSGKPSDVICIED
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaagatgatgaaggtgagcgcaataccgtacccttcacgccactctccagc
ttcttcgctgacgaagactccctcaagcaggaaaagaagaagaagcccaaaaagatgaaa
gaagggaaaatatccaaagttaaaaaaaggaaaaaagagggactacagacgagagtggac
agtgacctggaagagacgtcagaggtagaggaggaacaggggcgtttggaaatgtgctct
gagagtgagagcagcgcttatggctccacaaaaaagaagaagaagaaaccgagggaaaag
aaagagaagaagcccaggaagaagaagagagatggcgaagacgacgaagacgacgacgac
gacggtaacatgaaagaacccaaatcctccagtcagctgatgcacgagtggggccttgag
gatgttcagtacggtttcacagaagatgactacaaaactatcaccaactacaaggctttc
agtcagtttctccggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacggtgttaggggccaagtggcgagagttcagcgccaacaacccgttcaaaggcgca
tctgccactgctgtggctgctgctgttgctgccgccgtggaaacggttaccgtggcgcag
ccaacatctttcagcagcagccagctgagcgcgccgctaggaccaatcaaaaaagccaaa
accaaagaaggaaaggggccaggagtaagaaagaaaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcaggccagagtgggaagaagaagaaa
gcatcctcgagcgaggaagacttcctggaggagtcagacttcgatgacatcagcatccac
agtgcctctgtgctttctgatacctcaggggccgccacaaagaagaaggcccgacgtggg
cggaaaaaaagaaaaaaggaggacggcgatggctacgagacagaccaccaggactactgc
gaggtttgccagcagggtggagaaatcatcctgtgcgacacttgtccaagagcttaccac
ctggtctgcctggatcccgagctggagaaggcccccgaggggaaatggagctgtccgcat
tgtgagaaggagggaatccagtgggaggccaaagatgaggaggaggaggaggaggagcct
gcaggtgaggaggaggacgaccacatggagttctgcagagtgtgtaaagacggtggcgag
cttctgtgttgcgacacctgcccgtcgtcctaccacatccactgcctcaacccgcctctt
ccggagatccccaacggggagtggctgtgtcctcgctgcatgtgccctcctctcaagggt
aaagtgcaaaggatcctacactggacttggggcgagcccccgctgccagcagagctgcct
ccgggccccgacggccggccggccgaccccctgagcaagcccccgctcaagggccgtccg
gagagggagttcttcgtgaagtgggccggcctttcgtactggcactgctcctgggtcagc
gagctgcagttggagctttaccacacggtcatgtaccggaactaccagcgtaagaatgac
atggacgagccgccgccgtacgactacggctctggtgaggaagagctcgccaacgagaag
aggaagagcaaagatccccagtacgccgtgatggaggaacgcttctatcgctacggcatc
aaaccggagtggatggtcatccatcggattgtaaaccacagttttgataaagatggggat
gtgcactacctgatcaagtggagagacctcccctacgaccagtgcacctgggaagtggat
gattttgacgtcccagagtacgacacttataaagctttgtactgggaccacagagagcag
attttaggggaggatcaacgcccccttgtggtgaggaaaggaataaaactaaaagaggac
catcctaagagggagatccctcctgatgcccccatcatagatccgaccatcaagtttgaa
caccagccgtggtacatcaatgccaccggaggaacgctgcacccgtaccagctggagggt
ttgaactggctgagattttcctgggctcaggggacggacaccatcctggctgacgagatg
ggactggggaagaccgtgcagacaatcgtgtttctctactcactgtacaaagagggccat
tccaaggggccgttcttagtgagcgcgcctctgtccaccatcatcaactgggagagggaa
ttcgagatgtgggctccggatttctacgtgctcacgtacaccggagacaaagacagcagg
gccattatcagggaaaacgagttcacgttcgaagacagcgccgtaaaatctggacgcaag
gtgttccgcatgaagaaagacactcctataaagttccacgttctgctgacgtcttacgag
ctgatcactatagatcaagccattctgggctccatcacctgggcctgtctggtcgtagat
gaggctcacagactgaagaacaatcaatcaaagttttttagaattctcaacggctataag
atctactacaagctgctcctcacaggaactccacttcagaacaacttggaggaacttttc
catcttcttaacttcctcacccctgagcgcttcaataatctggacggcttcttggaggag
tttgcggatatctccaaggaagaccagatcaagaagctccatgacctgctaggacctcac
atgcttcggagactgaaagctgacgtcttcaagaacatgcctgcaaagacagagctcatt
gtcagggtggagctcagccccatgcaaaagaaatattacaaattcatcttgacacggaac
tttgaggctctgaactccaaaggtggcgggaaccaagtttccctactcaacattatgatg
gacctgaagaagtgctgcaaccacccctacctgttccccgtggctgctgtggaagctccg
gttctacccaacggctcttatgacggcagctcgctggtgaagtcctcaggaaaactgaca
ttacttcagaaaatgttgaagaagctcaaagatgaaggacacagagtcctcattttttct
cagatgacgaagatgctggatctacttgaggatttcctggagtttgagggttataagtat
gagcgtattgatggggggattaccggaggcctgaggcaggaggccattgaccgcttcaat
gctcccggcgcacagcagttctgtttcctgctgtcaacccgagctggaggtctgggcatc
aacctggccagtgcagacaccgtcatcatctacgactccgactggaatccacacaacgac
atccaagctttcagcagagcccaccgcataggccaaaacaggaaggtgatgatctatcgt
tttgtgactcggggctcggtggaggagagaatcactcaggtggccaagaggaaaatgatg
ctgactcacctggtggttcggcccggtctgggctccaagaccggatccatgtccaaacaa
gagctggatgacatcctcaagtttgggactgaagagcttttcaaagatgaaatggaagca
gcacgagctatgggcgacaacaaagacggtgaggagggcaacgtgattcattatgacgac
gatgccatctccaagttgctagatcgcagccaggacgccactgaagacacagagatccag
aacatgaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagaagat
ggagaggaggaggtggagcgggagatcatcaagcaagaggagaacgttgacccggactac
tgggagaaactcctgcgccatcactacgagcagcagcaggaagacctggcccgaaacctg
ggcaagggcaagcggatccggaagcaggtcaactacaacgatacgacccaggaggaccaa
gacaatcagtcggagtactcagtggggtccgaggacgaggacgaagatttcgaggagagg
cctgaaggtggacgcagacagtctcgtcggcagctcaagagtgagaaagacaaacctctg
ccgcccttactggcacgtgttggaggcagcattgaggtccttgggttcaacgcccgccag
cggaaagccttcctcaatgccatcatgcgctggggcatgcctcctcaggatgccttcaac
tctcactggctggtcagagacctgcgagggaagagcgagcgcgagttcagggcctatgtg
tctctgttcatgagacatctgtgtgagccgggagccgacggagcggagacctttgctgac
ggagtcccccgcgagggcttgtctcgccagcatgttctcaccaggatcggagtcatgtcg
cttgtcaggaaaaaggtgcaagagtttgaacatgtaaacggcaaactgagttctccagac
ctgattcccatcggcatggagctgaagaagctcactgagagtttatcctctgatcccaac
accccagtgccggccagccccgtcgctacacagccaggaacccccgtcccagcagagaag
acggagtctttcttgggtagcgccgaggacaaggagaccgcagaacaagatgggaagaaa
ctgctggagcaggaaccggcttccagcgcagagcccacgtctgcacccgagagggcggct
gacggtgaggagggcaaggccggcccggaggacaaggcggccgacgagaagagcagaacc
gaatccccctcctgcaaaaacgacccgtctgtgaactctaaagagtctgctttcaagcag
gcagagctgctgtccggtcacaccccacccaagatggaccactgcaaagaaacagagaag
tcctcagacagacgagatgctgccggttctcccctggaaaaagctgaggataaagaaaat
aagccagatgatgtgaagagtgaggacatgttggagggtcgattaaatggagacaaagac
actttggatgagatggacgacggcaggaaggaggataaaaacggattcaaagccaaattc
atgtttaatatcgcagatggaggtttcacagagttgcataccctctggcagacggaggag
agggcggcgctgtcttctggaaaaatgcacgacatctggcaccgtcgccatgactactgg
ctgctggctggcatcgtaacacatggctacgctcgctggcaagacattcagaatgacccc
cgctatgccattttgaatgagcccttcaaaactgagatgcataagggaaactaccttgaa
atgaagaacaagttcctggctcgtcgatttaagttattagagcaggctctggtgatcgag
gagcagctgcggcgggcggcgtacctcaacatgacccaggaccccagccacccagccatg
gctctcaacactcgcttcacagaggtggagtgtttggccgagtcccaccaacacctgtcc
aaagagtctctggccgggaacaagcccgccaatgccgttcttcacaaagtgctgaaccag
ctggaggaactcctgagtgacatgaaagcagatgtgacacgactgcccaacatgttgtcc
aggatcccgccggtgtcatcccgcctgcagatgtccgagaggagcatcctgagccgtctc
accagccggggcaacgagcctcctccgcagcagccttttagccagggagggttcggctgc
tcccagatgtacagcagcaacttcggagggggattcagaggaccaggagggcagcccatg
gtcaactacagccagatgcccttaggaccctacgtcagcgtgtcctctaatggcgccccg
ctacctacaagccatctggacaagaaatcacttgattccttgagagacgtggccacgcct
gatctcaagtctggcaaaccgagcgatgtcatctgcattgaggactag
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integrated database retrieval system
