Cololabis saira (Pacific saury): 133448469
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Entry
133448469 CDS
T09849
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04110
Cell cycle
csai04218
Cellular senescence
csai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133448469 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133448469 (rbl1)
04218 Cellular senescence
133448469 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133448469 (rbl1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
133448469 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
133448469
NCBI-ProteinID:
XP_061583012
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All DBs
Position
8:complement(19111833..19131550)
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AA seq
1065 aa
AA seq
DB search
MRGEESSDSESGRMEENSVRRSLETLCQELNMDEQTATEAMDNFTATWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMRKWADMSNLTQDF
RLRMDHLERNFEVSTVIFRKFEPIFMDMFQNPQGCEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPSFKGLPPLYRPD
GHIPPDEPSPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFLKQILKGNEEHLTEMLD
PQNFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKIVHERSASQTAAQSQL
QQHMEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSIVTGLRTSPSEHLTQL
FKSCSRDPTESILARVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKILENV
LVQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRSFPWIIDIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLENRAWTSDSALWSALEAAGNKVPTVEEVNFSS
SLDTGSGSANGGPSHLPLVAHSPIIHPRIKEFRSGLGSARKEVPPSPLSVHDRYSSPAAG
SAKRRLFGDDPPASSVGLSLTASPMPSPAKRLTFGSCGGTLKIGGQGTQTTVLSIPLQGL
SSDRTIALIPVQPCDSSGVVTAQFLLTSSPSRAPTVTAAPAIVEPQAGSGRPRRTGSLAL
FFRKVYHLASVRLRDLSLKLDISSELRGKIWTCFEHSLVNCTELMKGRHLDQLLLCSIYI
ISKITKETQSFQDIMKCYRSQPQASSHVYRSVLLHLTVKEQIADENMEVDSVSGGESAEK
TGHLPGDASPGQSAEEERGDLIQFYNTVYVLKMKSFALRYATNDNQADAPPLSPFPSVRA
QPLSPRRVSQRHSLYVSPHKNAAGSLTPTSYTYRINSSPSKDLSDINRMIRQGSASRKRA
FTMEGDVMMSSAYDSPSKRACSENGSSPDVLLKRLQDVVSERQSR
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtcggattcagagtcggggaggatggaggagaattcagtccgg
aggagtttggagacgttgtgtcaggagctgaatatggacgagcagacagcgactgaagct
atggacaacttcaccgccacatggaatacatacaccctggagggagaggtggtccactgg
ctggcatgctctctgtacgccgcttgcaggaaggggtccactcccacagtggggaaagga
ctgatggagggaaactgtgtgtccctcaccaggatccttcgctcctccaaactcagtctg
atccagtttttctctaagatgaggaagtgggcagacatgtcaaacctgacacaggacttc
aggctgcgaatggaccatctggagaggaactttgaggtctccactgtgatctttcgcaag
tttgagcccatattcatggacatgtttcagaatccgcagggatgtgagccgccgcgccag
ccgcgcagcaggaagcacaggcggctgccttgtcacatcagtgacgtgttcaagttctgc
tggactctgtttgtgtacacgaaaggtaactttcgtatgatcggcgatgacctggtgaac
tcgtaccacctgctgctctgctgtctggacttggtgtttggcaacgccctcctatgtgca
aacaggaaggatctcataaacccttcctttaaaggtctgcctccgctgtaccgccctgat
ggccacatacccccagacgagccttctccatgcgtgttggagcggttatgtgagctgcac
gatgggctggtggtggaggccaaaggcatcaaacagcactactttaaaccctacatacag
aaactgttcctgaaacagatactaaagggaaatgaggaacatttgactgaaatgttggat
cctcagaacttcattgataacaataaggccataaaccgggagtatgaggagtatgtgttg
acggtgggagactttgatgagcgagtgtttctgggagctgacgctgacgaggaaattgga
acaccgaggaagattgttcatgaacggtccgccagtcaaactgctgctcagagccagctt
cagcaacacatggagaagtctggctctctcgccccgtccacccctctgacgggtcgagtc
tacctgaaggaaaaggacctgctggtcacgccggtgtcctcggcgacgcagagcgtcagc
cggctgcagagtattgtgacgggtttgaggacgtctcccagcgaacacctgacgcaactc
ttcaagtcctgctccagagaccccacagagtccatactggctcgagtgaagactctggga
caaaccttcaaagagcattacaccaacgactcggaggacatgcctggctctcatatcgat
tttgcagaaaaccgcttgaaactggcagagatcctgtactacaagatcctggagaacgtc
ctggttcaggagaccaaacgactgcagggcagggacatgagtgttctgcttgagcaggac
attttccactgctcgctgatggcttgctgcctggaggtggtgttgttttcctacagctcc
caaagaagcttcccctggatcatcgatatcttcaagctcaccccgttttacttctttaag
gtgatcgaggtgttcatccgctcagaggaaggcctgtccagagacatggtgaagcatctg
aactcaatcgaggagcaagttctggagaacagagcgtggacctcagactctgccctgtgg
agcgccctggaggctgctgggaacaaagtccccacagtggaggaggtgaacttttcctcc
agtctcgacacgggttctggttcggctaacggaggtccgtctcacctgcctctggtggcc
cactcccccatcatccaccctcgtattaaggagttcaggtcgggcctgggaagcgcacgt
aaagaagtgcctccttctccgctgtctgtgcacgacaggtacagctcccccgctgctggc
agcgccaaacgccgtctattcggtgacgaccctccggcttcgtctgtgggcctgtccctc
accgcgagcccgatgccatctccggccaagaggctgacgtttggctcatgcggcggcacc
ctgaagatcggaggccagggaacgcagaccaccgtcctgagcatccccctacaaggttta
agtagtgaccgcaccattgcgctgatcccagtccagccgtgcgattcctccggcgttgtg
acggctcagttcctgctcacctcctccccgagtcgggctccaaccgtcacagctgctcct
gccatcgtcgaaccccaggcgggcagcgggcgtccacggcgcacaggctcgctcgctctg
ttcttcaggaaggtgtaccatctggccagtgttcgtctccgggacctgagcctgaagctg
gacatctcctcagagctgcgcgggaagatctggacgtgttttgagcactccctggtcaac
tgcaccgagctgatgaagggccgccacctcgaccagctgctgctgtgcagcatttacatc
atatccaaaatcactaaggagacgcagagcttccaggacatcatgaagtgttaccgcagc
caaccccaagccagcagccacgtgtatcgcagtgtcttattgcatcttactgttaaagag
caaatagctgatgaaaacatggaagtggattctgtctcgggtggagaatctgctgagaaa
actggtcatctccctggagacgcaagtcccggccaatcagcagaggaggagcgcggcgac
ctcatccagttctataacaccgtgtacgtcctcaagatgaagagctttgctttgagatac
gccaccaacgataatcaggcggatgctcctcctctgtctccgttcccgtcggtccgggct
cagccgctgtctcctcgccgagtctcgcagagacactccctgtacgtgtcgcctcacaag
aacgcggccggcagcctcacgccgacctcctacacctacaggatcaacagcagcccgtcc
aaggatctatcggacatcaaccggatgatccggcaaggctcggcgagcaggaagagggcc
ttcaccatggaaggggacgtgatgatgtcatcggcgtacgactcccccagcaagcgggcg
tgttcggagaacggcagcagcccagatgtgctgctgaagcgtctgcaggacgtcgtgtcg
gagaggcagagccgctga
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