Cololabis saira (Pacific saury): 133448540
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Entry
133448540 CDS
T09849
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
csai04218
Cellular senescence
csai04260
Cardiac muscle contraction
csai04261
Adrenergic signaling in cardiomyocytes
csai04270
Vascular smooth muscle contraction
csai04530
Tight junction
csai04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133448540 (cacna1da)
04020 Calcium signaling pathway
133448540 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
133448540 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
133448540 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133448540 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
133448540 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
133448540 (cacna1da)
04270 Vascular smooth muscle contraction
133448540 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133448540 (cacna1da)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133448540 (cacna1da)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
CAC1F_C
GPHH
PKD_channel
FAM176
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
133448540
NCBI-ProteinID:
XP_061583139
LinkDB
All DBs
Position
8:complement(21170662..21252410)
Genome browser
AA seq
2157 aa
AA seq
DB search
MSTTGPAPDPAPAVQEAPPSSTPAPAPAPAPAPAPKAPPAAPAPPAPATTTIPVGALAQK
KRQQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFANCMAL
AVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFV
IVVIGLFSVVLELLTKDEKAELEGAELHASMHGHGGKSGGFDVKALRAFRVLRPLRLVSG
VPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFISGQDAISEEE
PAPCAISGHGRQCSINGTECREGWQGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWM
NDAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEE
DLKGYLDWITQAEDIDPDNEDEADEETKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPA
SETESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWL
VIILVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFN
RFDCFVVCGGITETILVELQIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMK
SIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALITVFQILTGEDWN
AVMYDGIMAYGGPSSTGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDK
KDDKKEDEKEKEEEEENEDNAGDEEDPEVPSGPRPAISELVKKEKIIPIPEGSAFFIFSN
TNPIRVFCHRLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMFT
FEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRP
LRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSN
SEECKGTYIVYKDGDVNQPAIQRRMWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAI
DSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKN
QRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSA
LFNYVMDILNMVFTTVFTVEMFLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVNN
TEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAV
IGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGKLCDPESD
ANPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFK
RIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMF
NATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKF
YATFLIQDYFRKFKKRKEEGLVGAHPSQNNTAIALQAGLRTLHDIGPEIRRAISCDLQDD
ELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQVQPPPHYAHMEQPV
GRLSRANAMSHSNHHHHHHHHHHRHHNSYGKSPKSTNINLNNANVSSLPNGGHHRYYEHA
PPNGYPGRRSAYYDYEKPRTPQGQRRRYYETYVRSHRGNSHHPTIRREEEFDEDRLSGEY
YSGEEFYEDDSMLSGDRYYCFLLLYSHGTVPSSSDKNICFHMFIIPLRFFLSQIHNPPIN
PQFYLICRYQNSDTEYETPKGYHHPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGHRRPS
FNFECLRRQSSQDELPHQRTALPLHLMQHQVMAVAGLDSSRAHHLSPTRSTRSWATPPAT
PASKDQSPYYTPLIRVDRPHRDSVVSSQVSVRKSSWYTDDPEFSQRTYSPVHLQVPPEYH
NQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLN
GGVAPAINGVNVFPFLTPRDYELQDTGASYSDEDPETEPRAPYEEDLADEMICITTL
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccgggcctgccccagacccagcccccgcagtccaagaagccccacccagc
tcaacccctgccccggctccagccccggctccagccccggcccccaaagcgccaccggct
gctcctgctccacctgccccagcaacaactaccatcccagtaggtgcattagcacagaag
aagaggcagcagtatgcaaaaagcaagaagcagggtagtaacgccaacagcaggccacca
agggctctgttctgcctcaacctcaacaaccccatacgcagggcctgcatcagcctggtg
gagtggaagccatttgatatctttatattgattgctatttttgccaactgtatggcctta
gctgtgtatatcccttttcctgaagatgattccaactccacaaaccacgacctggaaaca
gtcgaatatgccttcctcatcattttcacaattgaaacctttctgaagattattgcttat
ggtctagtgatgcaccagaatgcgtatgtgagaaacggctggaacatgctggattttgtc
attgtggtgatcggactctttagtgttgtcttggagcttttgaccaaagacgagaaagca
gagctcgagggagcggagctccatgcgtcgatgcacggacacggaggaaagtcaggtgga
ttcgacgttaaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcagga
gtacccagtttacaggtggtgttgaactccatcattaaagccatggtccctctgctgcac
atagccctcctggtcttgtttgtcatcattatctatgctatcattggcctggagcttttc
atcggtaaaatgcatgcaacctgctttatatctggccaagacgcgatttcagaagaggaa
ccagctccatgtgctatctcagggcacgggcgccaatgctccataaacggcacagagtgc
agggagggctggcagggtcccaacggtggcatcaccaactttgacaactttctgtttgcc
atgctgacagtgtttcagtgtatcaccatggagggctggacagacgtgctatactggatg
aatgatgcaatgggccttgagcttccgtgggtgtactttgtcagtcttgtgatcttcggc
tcctttttcgttctcaatctggttctgggtgtgttgagcggagagttctccaaggagaga
gagaaggccaaggctcgcggagacttccagaagctgcgggagaagcagcagctggaagaa
gacctgaagggctacctggactggataactcaggctgaagacatcgaccctgacaatgag
gatgaggctgacgaggagaccaagcgcaaccgggtgactctggctgacctcactgagaag
aagaagggaaggtttgggtggttcagccagtcgtccgacactcatgcgagtgtcccggcc
agcgagacggaatctgtgaacaccgagaaccagaacggggaggatgaaaaaacgccctgc
tgcgggcctctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgccgctgg
aacaggttctgccgcaggaaatgtcgtttagccgtcaagtcggtgcctttctattggctg
gtcatcatactggtgttcctcaacaccctcaccatatcatccgagcattataaccagccc
atgtggctgacacaagtacaggatgtggccaacaaggtgctgttagccctgttcacgtgt
gaaatgttggtgaagatgtacagtcttgggcttcaggcttattttgtgtccctgttcaac
cgctttgactgcttcgtggtgtgtggaggaatcaccgagaccattctggtggagctgcaa
atcatgtctcccctcgggatctctgtgttccgctgcgtccgcctgctgaggatcttcaag
gtcacacgacactggcagtctctgagtaacctggtggcatctctgctcaactccatgaag
tctattgcttccctgctgctgctgctcttcctcttcatcatcatcttctcgttgttggga
atgcaggtgtttggaggaaagttcaacttcgacgagacacagactaagaggagtaccttt
gacaacttcccccaagcccttatcactgtgtttcagatactgactggagaagactggaat
gctgtaatgtatgatgggatcatggcatatggaggcccttcttccactgggatgatcgtg
tgcttttacttcatcatcctcttcatctgtggaaactatatcctcctgaatgtcttcttg
gctatcgctgtggacaacttggcagatgccgagtccctcaacacggatgagggagacaaa
aaagatgacaaaaaagaggatgaaaaagagaaggaggaagaggaggaaaatgaggataac
gcaggagatgaggaggacccagaggtcccatcgggccctcggccggccatctctgagctg
gtgaagaaggaaaagatcatccccatcccagagggcagcgcctttttcatcttcagcaac
accaacccgatccgtgtgttttgccaccgactcattaatcaccatatattcaccaacctc
atcttggtgttcatcatgctcagctctgtctcgctcgctgctgaggatccgattcgaaac
ttttcagcccgcaacattgtcctaggctatgcagattatgtcttcactagtatgtttaca
tttgagatcgtgttgaagatgacaacatatggagcttttctccataaaggagcattctgc
aggaattattttaacctcctcgatctgttggtggttggagtttcccttgtttcctttggc
attcagtcctcagccatctctgtggtgaagattcttcgagtccttcgagtgcttcgaccc
ctcagggccatcaacagagccaaaggcctgaagcatgtcgtgcagtgcgtgtttgtggca
atcagaactattggtaacatcatgatcgtcacgactctgcttcagttcatgttcgcctgt
ataggagtgcagctgtttaagggaaagttctatcgctgcacagatgaagccaagtccaac
tcagaagagtgcaaaggcacctacattgtttataaggatggagacgtgaatcagccagcc
atccaaagacgaatgtggcacaacagtgactttaactttgacaacgtcctcatggctatg
atggctttgttcacagtgtctacttttgaaggctggccctcgttgctgtacaaagccatc
gattccaacagagagaacctcggtcccatttacaactaccgggtggaaatttccatcttc
ttcatcatctacatcatcatcatcgctttctttatgatgaacatcttcgtaggttttgtg
atcgtcacatttcaggagcagggagagaaagagtacaaaaactgtgaactcgacaagaac
cagcgccaatgcgttgagtacgctcttaaagcacgtccacttaggaggtacatcccaaaa
aacccctaccagtacaagttctggtatgtggtaaactccactggttttgagtacatcatg
tttgtgctcatcatgctcaacacactctgcctggctgtacagcactatggccagtcagcg
ctttttaactacgtaatggacattctcaatatggtcttcactactgtatttactgtggaa
atgtttctgaaactcatcgctttcaaacccaggcattatttcgctgatgcgtggaacaca
tttgatgccttaattgttgttggtagcgtcgtcgatattgcgatcactgaagttaataac
acagaggacagcgcccgaatctccatcaccttctttcgtctgtttcgagtcatgcgtctg
gtcaaactcctcagcagaggggagggcattcgcaccttgctctggactttcatcaagtcc
ttccaggctctgccatatgttgctcttctgatagccatgctgttcttcatctacgctgtc
atcggcatgcaggtgtttggcaaggttgccatggtggacggcacacacattaacagaaac
aacaacttccagacgttcccccaggcggtgctcctgctctttaggtgtgccaccggcgag
gcgtggcaagagatcatgttggcctgcatgcctgggaagctgtgcgatccagaatcagat
gccaaccccggagaggagatgacgtgcggcagtggattcgcgatcatttatttcatcacc
ttctacatgctctgcgctttcttaatcatcaatttgtttgtggctgtcattatggacaac
tttgactatctgacacgggactggtccattcttggtcctcaccacctcgacgaattcaag
aggatttggtcagaatacgaccctgaggccaagggcagaatcaaacatctggatgttgtg
acccttcttcggcgtatccagcctccgcttggttttggaaaactgtgtcctcacagagtg
gcttgcaagaggctggtagccatgaacatgcccctgaacagcgacggcaccgtcatgttt
aacgccaccttgtttgcactggtgcggacagccctgaaaattaaaacagaaggtaatcta
gagcaggccaacgaggagctgcgggctgtcatcaagaaaatctggaagagaaccagcatg
aaactgctggaccaagtggtacctcctgctggtgatgatgaggtaaccgtggggaagttc
tatgccaccttcctgatacaggactactttaggaaattcaagaaacgtaaagaggaaggc
ctggtgggtgcacacccttcccagaacaacacagccattgccttacaggctggccttcgc
acgctgcatgatattgggcccgaaattcgccgagccatatcatgcgatctgcaggatgac
gagctagtagactttattccagaggaagacgaggaaatttataggcgtaacggcggtctc
ttcgggaaccacctcatgaacggcggtcaccggcggtccaacgggcatcagaccaacgcc
acccagcgccccctgcaggtgcagcctccacctcactacgctcacatggagcagccggtg
ggccgcctgtctcgagccaacgcaatgtcgcattccaaccaccaccaccaccaccaccac
catcaccaccgccaccacaactcctacggcaagtctcctaaatcaaccaacatcaacctc
aacaacgccaacgtgtccagtctgcccaacggaggacaccatcggtactacgaacacgct
ccccctaacggctacccaggtcgacgcagtgcctattacgactacgagaaaccgcggaca
ccgcagggtcaaagaaggcgctactatgagacctatgttaggtcccacagagggaatagc
caccaccccaccatccgcagggaggaggagtttgacgaagaccgattatctggggaatat
tacagcggggaggagttttacgaggatgacagtatgctgtcaggggacaggtattactgt
ttcttattgctctattcacatggcactgtaccctcatcatcagacaaaaacatctgtttt
cacatgtttataattcctttaagattttttttaagtcaaatccacaaccctccaataaac
cctcaattctatctaatttgtagatatcagaacagtgacacagagtatgagactcccaaa
ggctaccatcaccctgacagttactatgacgatgacgagcagcccctctaccgcgactca
cgaaggtcaccaaagagaaggctgcttcctgccacacctcaaggtcacagaagaccgtcc
ttcaactttgagtgtctgcgaagacaaagtagccaggatgagcttccacatcaacgtact
gctctaccactacaccttatgcagcatcaggtaatggctgtagcaggcctggactccagc
agagcccaccacctttccccaacccggtccacccggtcctgggccacacctcctgccacc
ccagccagtaaagaccagtccccgtactacacccctctcatccgagtggaccgccctcac
agggacagtgtagttagcagccaagtgtctgtgcgcaagagttcctggtacacggacgac
cccgagttctcccagaggacgtactcacctgtccacctgcaggtgccgcctgagtaccat
aaccagtatcaccagaagagaggcagtgcaacaagccttgtggaagcggttttaatatcg
gagggtcttgggagatacgccaaggatcctaagtttgttgcagccacaaagcacgagata
gcggacgcgtgtgagatgacgatagacgagatggagagcgcagccagccacctgctgaat
ggaggagtggccccggccattaatggggtcaacgtttttccatttctaactccaagggac
tatgaactgcaggacactggagccagctacagtgacgaggatccggagacagaacccaga
gctccctatgaggaggacctggcagacgagatgatctgcatcacaactttatag
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integrated database retrieval system
