Cololabis saira (Pacific saury): 133448591
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Entry
133448591 CDS
T09849
Symbol
slc6a22.1
Name
(RefSeq) solute carrier family 6 member 22, tandem duplicate 1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133448591 (slc6a22.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133448591 (slc6a22.1)
Transporters [BR:
csai02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
133448591 (slc6a22.1)
SSDB
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
133448591
NCBI-ProteinID:
XP_061583246
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Position
8
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AA seq
576 aa
AA seq
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MGTAHLATSRGQWSSKIEFLLAVAGQIIGLGNVWRFPYLCYKNGGGVFFIPYVLFLFSCG
IPLFLLETSLGQYSKQGSITCWRKICPLFEGLGYGSQVVVLYSSIYYIIILAWAFLYLFS
SFNAELPWASCRNSWNTDTCVEFDRTHHYSNMTINVNATSPVREFWERRVLNITGDINEL
GSIRWELALCLLLSWILCYFCVWKGVQSTGKVVYITATFPYVMLAVLLVRGITLPGALNG
IKFYLYPDPSRLSDPQVWMDAGTQIFYSYAICIGCLIALGSYNKYNNNCYKDCVYLCLLN
SGTSFVAGFAIFSALGFMAYEQNTDISKVAESGPGLAFIAYPRAVAMMPFPQLWAVFFFI
MIILLGLDSQFVGLEALVTSISDTNPAFFHVGHRRKLLLLAICVVSFFIGLVMVTEGGLY
IFQVFDYYACSGMTLLLFATLQSVCVGWIYGADRFYDNIEDMIGYRPLGLIKYCLKYLTP
VVCVGTFLFTLIKYTPLKFNNTIEYPWWGYALGWWFTLSSTLLVPVGFLYNLSMTPGTLR
QRISALCTPAEDLPLTKFRKKAPELHLVPSSSDNTA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagcacatcttgcaacctccaggggacagtggtcaagcaaaattgagttcctc
ttggctgttgcaggacaaattattggcctaggaaacgtgtggcggtttccttacctctgt
tacaagaatggagggggggtgttttttattccttacgtgctcttcctcttctcctgtggc
atccccttgtttctgctggagacgtctctgggccaatatagcaagcagggaagtatcacc
tgctggaggaagatttgtcccctctttgaagggttgggttatggaagtcaagtggttgtt
ttatactccagtatctattacattatcatattggcctgggcattcctgtatctcttctcc
tctttcaatgctgaacttccctgggcaagctgcagaaacagctggaacacagacacgtgc
gtggagtttgatcgaacacatcattattccaacatgaccataaatgtaaatgcaacatca
ccagtgagagagttttgggagaggagagttctgaacatcacaggtgacatcaatgagttg
ggcagtatacgatgggagttggctctgtgtctattgttgtcttggatcctctgttacttc
tgtgtatggaaaggagtacaatctactggaaaggttgtttacattactgctacatttcca
tatgtgatgctggcagtgctgcttgtccgtggaatcacacttcctggagccttaaatggg
atcaagttctacctttacccagatccttcccgcctctctgatccccaggtttggatggat
gcaggcacacaaatattttattcttatgctatttgcattggctgtctaattgcacttgga
agctataataaatacaacaataactgttacaaggactgtgtatatttgtgccttctgaac
agtggaaccagttttgtcgctggttttgccatcttctctgcccttggattcatggcttac
gagcagaacacagatatatcaaaagttgcagagtcaggacctgggttggccttcattgcc
tatcctcgagcagttgccatgatgccttttcctcaactctgggcagtattctttttcatt
atgatcatcctgctgggactggatagtcaatttgtgggtctggaagctctcgtaacatca
atttctgacacaaatcctgctttcttccacgttggccatcgacgtaaactactcctgctc
gccatctgtgttgtcagtttcttcatcgggcttgtgatggtaacagagggtgggctgtat
atctttcaggtgtttgactactatgcctgcagtggaatgactttgcttctgtttgccaca
ttgcagtctgtgtgtgttggatggatatacggtgctgaccgcttttatgacaacatagag
gatatgattggatacaggcctctcggcctcattaagtactgcctgaaatatctcactcca
gtggtttgcgtgggaacttttctttttaccttgatcaagtacactcccctgaagttcaac
aacacaattgagtatccatggtggggttacgctctcggctggtggttcacgctctcctca
acactgttggttcccgtggggttcctgtacaatctgagcatgactcctggtacactgcgg
cagagaatctctgccttgtgcaccccagctgaagatcttcctctgaccaaattcagaaag
aaagcccctgaactgcaccttgtaccctcatcatctgacaacacagcgtga
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