Cololabis saira (Pacific saury): 133448606
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Entry
133448606 CDS
T09849
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133448606 (rrp9)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
Other 90S particles
133448606 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WDR54
VPS11_N
Motif
Other DBs
NCBI-GeneID:
133448606
NCBI-ProteinID:
XP_061583279
LinkDB
All DBs
Position
8:22993226..22999824
Genome browser
AA seq
485 aa
AA seq
DB search
MSSSFFIKTKSKPKLTTKGANGAAPKRKGDGGADGKNKLRAKKPNAKYNEEISSDSETES
PVVSKKRQVHAENDFDETPQDKKLRLAKLYLDQLKEEEENKADDESFETDLVAGRLQEEV
LEQKGKLQRLIAKDLVAPDASDIRVLRGHKLPITCLVVTPDDKCIFSAAKDCSVIKWDVE
SGKKLHTIPGGRKGTEDRHIGHTAHILCMAISSDGKYLATGDMNKLIMIWEAETCKHLFK
FTGHKGPVSGLSFRKGTHDLYSASQDRSVKVWNVDENAYVETLFGHQDAITGLDSLSREC
CVTAGGRDGTVRVWKIAEESQLVFHGHDGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLSTVKKAHGCHGDVGLEQPHWVASVAALQNSDTVASGASGCSHNSQVNVWKCGQNYRGL
ELLFSVPVSGFVNSLKFSSSGQFLVAGIGQEHRLGRWWRIKDAKNGIYIIPLKRKPNPEE
AKMTK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcatttttcataaaaacaaaatcaaagcccaaactaaccacgaagggggca
aacggagcagcgccaaaacgaaagggtgatgggggtgctgatggaaagaacaaactacga
gcaaagaagcccaatgccaaatacaacgaggagatttccagcgattctgaaacagaaagt
cctgtagtgtccaagaagaggcaagtccatgcggagaatgattttgatgaaactccacaa
gataagaagcttagattagctaaactgtacctggaccagctgaaggaagaggaggaaaat
aaagcagatgatgagtcctttgagacagatcttgtggcaggaaggcttcaagaagaagtg
cttgaacagaaaggaaagctccaacggctcattgctaaagatctcgtagcaccagatgct
tcagatatcagggtgttgagaggacacaaacttccaattacctgtcttgtcgtaacccct
gatgacaaatgcatattttctgctgccaaagactgctccgtgataaaatgggacgttgag
agtggaaagaagctgcacacaatacctggtggcaggaaaggtacggaagatcgccatatc
ggacacacggctcacatcctgtgtatggccatatcttcagatggaaaatacttggctact
ggagacatgaacaaacttatcatgatctgggaggctgaaacatgcaaacatctatttaaa
tttacaggacacaaaggccctgtgtcgggtctatcgttcaggaaaggaacccatgatctg
tacagcgcttctcaagaccgctcggtcaaggtgtggaatgtggacgagaacgcatacgtg
gaaactctctttggccaccaggacgccattacagggctggacagtctgagccgggaatgc
tgtgtgacggcagggggacgggacggcaccgtgagagtttggaagatagctgaggagtct
cagctggtgtttcatggacatgatggttcaattgattgtatccagctcataaatgaggag
cacatgataacaggagctgatgatggctcagtgtctctttggagtgtcaacaagaagaag
cctctcagcacagtgaagaaggctcatggttgccatggcgatgtagggctggagcagcct
cattgggtggcctcagtagcagcccttcagaactccgataccgttgcctcaggtgcctcc
ggctgttcgcacaactcgcaggtgaatgtgtggaagtgtggccagaactatcgtgggttg
gagcttctattcagtgttccagtgtccggatttgtcaatagtttgaagttttcaagctcc
ggtcagttcttggtagccggcatcggacaggaacacaggttgggtcgctggtggagaatc
aaagatgccaaaaatgggatctatatcattccacttaaaaggaaacctaatccagaagaa
gccaaaatgactaaataa
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