Cololabis saira (Pacific saury): 133448640
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Entry
133448640 CDS
T09849
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133448640 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133448640 (wdr82)
03036 Chromosome and associated proteins [BR:
csai03036
]
133448640 (wdr82)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133448640 (wdr82)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
133448640 (wdr82)
COMPASS/SET1 complex (yeast)
133448640 (wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD_LRWD1
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_DCAF4
MinC_C
Motif
Other DBs
NCBI-GeneID:
133448640
NCBI-ProteinID:
XP_061583336
LinkDB
All DBs
Position
8:complement(24113405..24119722)
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFAGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacggacaatgtgctgcggagcttcagggtagccaaggtgttccgagagaac
tccgacaaaattaactgcttcgacttcagctcaaacggagaaactattatttccagcagc
gacgacgactcgttagtcttgtacgactgccaggagggaaaacccaagaggaccctctac
agtaaaaagtatggagtggatctaataaggtacacacatgctgcaaacacggtggtctac
agttccaacaaaattgatgataccatcagatacttatcccttcatgacaacaaatacatc
agatattttcctggacacaataaaagagtgacatctctctccatgtctcctgtggatgat
acatttatttctggctcattagataaaaccatcaggctatgggatctgcgatcacctaac
tgccaaggcttgatgcacctgcaggggaagccagtgtgctcttttgatccagagggtctc
attttcgctgctggaataaattcagagatggttaaactttatgacctgcggtcatttgac
aagggtccctttgcaaccttcaaacttcagtatgatcggacatgtgaatggacagggctc
aagtttagcaatgacgggaagcttattcttctttccactaatggaggagcccttcgtatc
ttggatgcttttaagggggctgtgctacattcctttgcgggctacaacaacagtaaaggt
gtaacgctggaagcctctttcaccccagattctcagtttgtgatgattggctcagaagac
ggaaagatccacgtgtggaatgcggagagtggtatgaaggtggcattattagatgggaaa
cacacagggccgatcacctgtctgcagttcaaccccaagttcatgacgttcgccagtgcc
tgctccaacatggcattctggctccccaccattgacgactaa
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integrated database retrieval system