Cololabis saira (Pacific saury): 133448727
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Entry
133448727 CDS
T09849
Name
(RefSeq) uncharacterized protein LOC133448727 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133448727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133448727
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133448727
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133448727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
Baculo_IE-1
zf-C3HC4_4
zf-RING_5
zf-RING_4
zf-RING_10
KH_DTX3L
DZR_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
133448727
NCBI-ProteinID:
XP_061583519
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All DBs
Position
8:complement(27467350..27469392)
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AA seq
480 aa
AA seq
DB search
MVKPAPGVIDLQKLHNQRLSLRDVPLVTIVSVNLAPLKPDGQTSGNASVSPRPSSVLQSG
NAVQMVDHSDPGSTADHTSDEDKKNPLDNCLLPVFHFMYMSNIYKEEIASIEKKHGVKME
AQATVTFSSDQEDDRQKALTEFTNLVQTRLSEVSSSVIPTKFVDSDQWSRALKISQKNEN
KLMLTMFSEEITVFGPSHCQEAFSSTLNATHKKNDTLEEEDPEHQDPSFKIKTTFNDRLA
YTGLTMEESTGKLLTTSLTNMSDYDYSETSRGPGQDTRSTQHATARSGEGATAGDSKDET
CPICMDLFTNKKQLKCKHELCEECLQNLEKHIGPICPVCKDVFGVMKGNQPEGTMTCKRD
PASLPGFDNRGTIVITYRIQDGIQTEKHPNPGQRYTGTQRTAYLPDNTEGNEVLQLLKKA
FDQKLIFTVGESRTTGVENMVTWNDIHHKTSTSGGPSRYRYPDPDYLKRVKEELKAKGIM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacctgctccaggtgtgattgatcttcagaaactgcacaatcaacgtctcagc
ctgagagatgttcccctggtgaccattgtgtctgttaatctggcaccattaaaacctgat
ggccaaacttcaggcaatgcttcagtgagcccccgtccttcatcggtgcttcaatctggt
aatgctgtgcagatggtggatcatagtgatccaggttctacagcagatcacacttctgat
gaggacaaaaagaaccctctagacaattgtctcctcccagtgtttcatttcatgtatatg
agcaacatctacaaggaagaaattgcaagtatagagaagaagcatggagttaaaatggag
gcacaggccactgtgacgttttcctctgaccaggaagatgaccgacaaaaagcccttaca
gagttcacaaaccttgttcagacgcgcttatctgaagtcagtagctcagttatcccaacc
aagtttgtcgactcagatcagtggagtagggcactgaaaataagtcagaaaaatgagaac
aagctcatgcttactatgttttcagaagaaattaccgtatttggaccaagccactgtcaa
gaagcattcagttcaaccttaaatgcaacgcacaaaaaaaatgacactttagaggaggaa
gaccctgaacaccaagacccatcttttaagataaaaacgaccttcaacgaccgtctagct
tatacagggttgaccatggaggagagcaccgggaagctgctgactacgtcactgacgaac
atgagtgattatgattattcagagacctccagaggacctgggcaggatacgcgttcaaca
cagcacgctacagcacgttcaggagagggagcgacagcaggagacagtaaagatgaaacc
tgccctatatgcatggatctgtttaccaataagaaacaactgaagtgtaaacatgagctt
tgtgaggaatgcctgcaaaatttagagaaacacattggacctatctgtcctgtttgcaaa
gatgtgtttggtgtgatgaagggaaaccagccggagggaacgatgacatgtaagagagat
cctgcatctcttcctggatttgacaaccgtggtactatagtcatcacgtatcggattcaa
gatggaatacaaacggaaaagcatccaaatcctggacagcggtacactggtactcagaga
actgcatatctcccagacaacacagagggcaacgaagtgctacaactgttgaagaaagcg
tttgaccagaagctgattttcacagttggggaatccagaacgactggggtggagaacatg
gtgacctggaatgacattcaccacaaaacaagcacgtctggtggaccgtcgagatatcga
taccctgacccggattatctcaaaagggtcaaggaggaactgaaggctaaaggcattatg
taa
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integrated database retrieval system
