Cololabis saira (Pacific saury): 133448790
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Entry
133448790 CDS
T09849
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4
KO
K26226
liprin-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133448790 (ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133448790 (ppfia4)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133448790 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
133448790
NCBI-ProteinID:
XP_061583649
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All DBs
Position
8:29684304..29756058
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AA seq
1197 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGNAGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQTKLQGALHERDALQRQINAALPQNGTHFSTHMYQEFATLTKELNICREQLLEKEEEI
SELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHH
KALDEKVRERLRVSLERVATLEGQLATTTQELSMVRQRKDGDSVERTDGSKPTWKRLPNG
SIDAHDDGSRASELQDLLDRTNKELTETRKLSTTLNGRIVDLEAELSNTRRELSRSEELS
IKQQREQREREDMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVR
QLQEMLEMAEQRLAQTMRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEE
KNQELGRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLEN
CQKQLEEFHHTRERLIGEIDKLRNEIDHLKRRSGAFGDGAHPRSHLGSSSDLRFSVVEGQ
DGHYSTTVIRRAQKGRLSALRDDPNKDYPSLRGSVSHLLGSDLEAESDMDDDVSSTLLSP
SGQSDAQTLALMLQEQLDAINEEIRMIQVERESTDLRSDELESRVNSSSMDGLNVTLRPR
ALPTSATSQSLASSCSPPNSGHSTPKHHGRNPSHHLGIMTLPSDLRKHRRKVASPVEVDK
ATIKCETSPPSSPRSLRLETNFAQFTGSLEDGRSKQKKGIKSSIGRLFGKKEKGRMDQTV
GRDGQSLPALTDFEMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKKGLPFAQWDGPT
VVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMV
SLTSPSAPLTSRTSSGNVWVTHEEMENLASSSKAENEEGSWAQTLAYGDMNHEWIGNEWL
PSLGLPQYRSYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIMCLKRLNYDRK
DLDRRREDSQHDMKDVLVWTNEQVIHWVQSIGLREYSGNLLESGVHGALIALDETFDYSS
LALILQIPMQNTQARQVLEREFNNLLALGTDRRLEESGDDKTFRRSPSWRKRFRAREGGA
GLGMMAGSMETLPAGFRMPSMSMPHSVNLASKKHLQPEAPPPAPTRLDPSTVRTYSC
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgactatcagcgaaggggactcggccggtcctccgagaggc
aacgccggcgtcccgaacggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagagacaagctgctggagtccctcagggagactcaggagaccctcatc
cagtctcagacgaagctgcagggggcgctgcacgagagggatgcgctccagcggcagatc
aacgccgcgctgcctcagaatgggacccacttcagcacccacatgtatcaggagtttgcc
accctgacaaaggagctcaacatatgccgggagcagctgctggagaaagaggaggaaata
tccgagctgaaagctgaaagaaacaacaccaggctgctgttggagcacctggagtgtctg
gtgtctcgtcatgagcgcagtctgaggatgacagtggtgaagagacaggcgcctccacca
tctggagtttccagcgaagtggaggtcctcaaagctctgaagtcattgtttgaacaccac
aaggctctggatgaaaaggtgcgtgagaggcttcgggtgtcgctggagagggtggccacc
cttgaggggcagttagcaactaccacgcaagagttgagcatggtgcggcagaggaaggac
ggtgactccgtggagcgaacagatggatccaagcctacatggaagagactgcccaacggc
tctatagatgcacacgacgacggcagccgggcgtctgagcttcaggacctgctcgatcgg
accaataaggagctgactgagacccgtaaactgtctaccaccctcaatggtcgcatcgtc
gacctggaggcggagctgtcgaacacgcgtcgagaactgagccgcagtgaggagctgtca
atcaaacagcagagggagcagagggagagagaagatatggaggagaggataacaacatta
gagaaacgttacctggctgctcagagggagaccacgcacattcatgacctcaatgacaag
ctggagaacgaactggccaccaaggactcactgcaccgacagagtgaagaaaaggtgcgg
cagctgcaggagatgctggagatggcagagcagaggttggctcagaccatgaggaaggct
gagacactgccagaggtggaagctgaactggcacagagagttgccgcactctccaaggcc
gaggagcggcatggcaacgtggaggaacgcctcagacagctggaatcacaactggaggaa
aagaatcaagaattaggaagggctcgtcagagggagaaaatgaatgaggagcacaacaag
cgtttatctgacactgtggatcgtttgctcactgagtccaatgaacgactgcagctccac
ttgaaggaacgcatggctgcactggaggacaagaactccctcattcaggaccttgagaac
tgccagaaacagcttgaagaattccaccacaccagggaacggctgattggagagattgat
aagctgaggaacgagatcgaccatttaaagcgtcgcagtggggcatttggagatggagct
cacccccggtctcacttgggaagctcaagcgacctccgcttctctgtagtggaggggcaa
gatggccactacagcacaactgtgatcagacgggcacagaagggccgactgtccgcgcta
cgagatgacccgaacaaggactacccatccttgcgtggcagcgtcagccacctactcggc
agcgacctggaggcagagtcagacatggatgatgatgtcagctcgaccttgctgtctccc
agcggccaatcagatgctcaaactctcgctcttatgctgcaagagcaacttgatgccatc
aatgaggagataaggatgatccaggtggagagagagtcgacagacctgcgctctgatgag
ctggagtctcgggtgaacagcagcagcatggacggcctcaatgtgacccttcgaccccgg
gctctgcccacatctgctacttcccagtcccttgcatcatcctgctccccgcccaacagc
ggccactcaacacctaaacatcatggacgcaaccccagccaccacctcggcatcatgact
ctgccaagtgacctgaggaaacacagaaggaaagtggcctctccggtggaagtggacaaa
gccactatcaagtgtgagacatcgcctccctcctccccccgcagcttacggctagaaacc
aattttgctcagttcacagggagtctggaggatggacgaagcaagcagaagaaaggaatc
aagtcttctattggccgattgtttgggaagaaggagaagggtcgcatggaccagactgtc
ggcagggatggacagtctctaccagctttaacagactttgagatgggtatcggcgacact
atgactctgggaaaacttggcacgcaagctgagagggaccgcaggatgaagaaaaaacat
gagcttctggaagatgcaaggaaaaaaggtcttccttttgcacagtgggacggtcctact
gttgtctcgtggcttgagctgtgggtgggcatgccagcctggtatgtggcagcctgtcgg
gccaacgtgaagagcggagccatcatgtcagcactgtctgacacagaaatccagagggag
atcggcatcagcaaccctctgcaccggctcaaactccgtttggccatccaggaaatggtc
tccctcaccagcccgtccgcacctctcacatccagaacgtcctccggaaatgtgtgggtg
actcatgaagagatggagaacctggcttcctcctctaaagcggagaatgaggagggcagc
tgggctcagaccttggcatatggagacatgaatcatgagtggatcgggaatgaatggctg
cccagccttggtctgcctcagtatcgctcctacttcatggagtgtctcgtggatgcccgg
atgctggaccacctgaccaagaaggacctgcggacccacctgaagatggtggacagtttc
cacagggctagtctgcagtatggcattatgtgcttgaagagactcaattatgacaggaaa
gaccttgaccgccggagagaggatagtcaacatgatatgaaagatgtcttggtgtggacc
aatgagcaggtgatccactgggtccagtccattggtctaagggagtacagcggcaacctt
ttagagagcggcgttcatggagcgctcatcgctctggatgagactttcgactacagcagc
ctagcgctcatcctgcagatccctatgcagaacacacaggcacggcaggttctggagcgg
gagttcaacaatctgttagcgttggggacagaccgccgactagaagagagtggagatgac
aagacatttcggcgctctccatcatggcgcaagaggtttcgggctcgtgagggaggggca
ggtttagggatgatggcaggctctatggaaacgctacctgctggcttccgtatgccctct
atgtccatgccacactcggttaatttggcgtccaaaaaacatctccagcctgaagctcct
cccccagcacccacgagactcgacccctcaaccgtgaggacctattcatgctaa
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