Cololabis saira (Pacific saury): 133448818
Help
Entry
133448818 CDS
T09849
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133448818 (ddx19b)
03015 mRNA surveillance pathway
133448818 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133448818 (ddx19b)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133448818 (ddx19b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133448818 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133448818
NCBI-ProteinID:
XP_061583692
LinkDB
All DBs
Position
8:30479903..30490736
Genome browser
AA seq
493 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGTLQIKDKPEENGTVAGTVIANATDSSSTAPKPEDEGETK
TTDDDDKDDRAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQG
VYALGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCL
CVSPTYELALQTGKVIEQMGKYYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCA
KFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQ
RIVPDPNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHTRKTA
GWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVI
NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERL
DTDDLDEIEKIAG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcctgggctcaggcggtggacgagcaagaagcggcggcggagtcgatc
ggtactctccagataaaagacaaaccagaggagaatggcacagttgcaggcacagttatt
gcaaacgcaactgactcgagtagcacggccccaaaaccagaagatgaaggggaaactaaa
actacagatgatgatgacaaagatgacagagcagcgcagtcactgttgaataagctgata
cggaataatcttgtcaatacaacaaatcaagtggaagttcttcagaaggatcccaactcg
ccgctttattctgtaaagtcctttgaagaattgcggctcaaaccacagctgcttcaagga
gtgtatgccctgggatttaatcggccatccaaaattcaagaaactgccttacccatgatg
ctggctgagcctccacagaatttgattgctcagtcacagtcaggaacaggaaaaacagca
gcttttgttttggccatgctcagccatgttgatcccaacaacagatatccccagtgcctc
tgtgtgtcacccacctatgaactggcacttcagactggtaaggtgatcgagcagatgggc
aaatattatcctgaagtcaaactagtctacgccattagaggaaataaattgcagcggggc
atgaaactgcaagaacagatagttattggtacacctggtaccatgctggattggtgcgct
aaattcaaatttatagacccaaagaagatcaaagtttttgtgcttgatgaggctgacgtc
atgattgccacgcagggtcaccaggatcagagtatacgaattcagaggatgctgcccaaa
aactgccagatgttgctgttctcagccacgtttgaggagacagtttggaactttgcgcaa
cgcatcgtgcctgatcccaacatcattaagctgaagagagaggaggagacgctggatacc
atcaaacagtattatgtgttatgtaactgcaaggaggagaagttccaagcgctctgtaac
atctacggagccatcaccatcgctcaggccatgatcttctgtcatacgaggaagactgca
ggctggctggcaggcgagctgtccagagaaggtcaccaggtggcactgctgagtggagag
atgcaggtggagcagagggctgctgtcattgaacgcttcagagatggaaaggagaaagtc
ctggtgaccacaaatgtttgtgctcgaggtattgatgtagaacaagtgtccgtggtgatt
aacttcgacctgccggttgacaaggatggcaaccccgacaacgagacgtacctgcacagg
attggacgcacgggccggtttgggaaacggggactggccatcaacatggtggacagcaag
atgagcatgaacatcctcaacaggatccaggagcatttcaataagaaaattgaaagacta
gacacagacgatctggatgaaattgagaaaattgccggctaa
DBGET
integrated database retrieval system
