Cololabis saira (Pacific saury): 133448840
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Entry
133448840 CDS
T09849
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133448840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133448840
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133448840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Nup35_RRM_2
PHM7_cyt
NID
Motif
Other DBs
NCBI-GeneID:
133448840
NCBI-ProteinID:
XP_061583731
LinkDB
All DBs
Position
8:complement(31304689..31330785)
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AA seq
350 aa
AA seq
DB search
METEGSPSSLSSGPDTNSPHDPCKMFIGGLSWQTTQEGLREYFCKFGEVKECMVMRDPVT
KRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLS
VNTTIEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNK
MVECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTTTYTSRSYTGIAP
GYTYQFPEFHLERTPLLTSSHPHELAAIPLTAYGPMAAAAAAVVRGSTPSRTAGFLGTSS
PGPMADLYAAANQDSGVSSYISAASPAPSTGFGHGIGGPLIATAFTNGYH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagcccgagcagcctgtcctccggcccggacaccaactccccccac
gacccctgcaaaatgttcatcgggggtctgagttggcagacaacacaagagggcttgagg
gagtacttctgtaaatttggagaagtgaaagagtgcatggtgatgcgggatcccgttacc
aagaggtcgagggggttcggcttcgtgacatacgcagaacaagcgggtgtggaaaaggtt
ttggcgcaaaacagacacgaactggattccaaaacaatcgacccaaaggtagcgttcccc
cgccgggcccagcctaagctggtgaccaggacaaagaagatctttgtcggaggactgtca
gtcaataccaccatcgaagatgtgaagcaatactttgagcagttcggaaaggtcgatgat
gccatgctcatgttcgacaaaacaaccaacaggcacagaggttttgggttcgtcaccttt
gaaaacgaagacgtggtggagaaagtgtgcgagatccactttcacgagatcaacaataaa
atggtggaatgtaagaaagcccagcccaaagaggtgatgacaccgacaggctcagccaga
ggtcgctccagagtgatgccttatgggatggacgccttcatgctgggtatcggcatgtta
ggctaccccggtttccagactactacctacaccagccgcagttacactggaattgctcct
ggatacacttaccagttcccagaattccacttagagaggacccccctcctgacatcatcc
cacccccacgagctggcagccattccactgactgcatacggaccaatggcagctgcagca
gcagcagtagttagaggctccaccccttcacgcacagctggcttcctgggcaccagcagc
cccggaccaatggctgacctgtatgccgcagccaatcaggactcaggagtcagcagctac
atcagtgccgccagtcctgcccctagcacggggttcggacacggaatagggggtcctctg
attgcgactgcattcactaatggataccactga
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