Cololabis saira (Pacific saury): 133448951
Help
Entry
133448951 CDS
T09849
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133448951 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133448951 (usp48)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133448951 (usp48)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133448951 (usp48)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133448951 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
133448951
NCBI-ProteinID:
XP_061583962
LinkDB
All DBs
Position
8:complement(39420289..39445107)
Genome browser
AA seq
1047 aa
AA seq
DB search
MAPRVQLEKAAWRWVDSVKPEEIRQQHVELAYRIHLAACRRGGCRRNCKGNPNCLVGIGE
QAWLGDIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
YNSRAQEHNSESDYEPKSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKSPSLQNVIQQQFCGQFFYVTVCNQCGRSSALPSRFYELELNIQG
HKSLTECVTEFLKEEKLDGENRYFCESCQSKQSATRRIKLNSIPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMAPFLEGKQDQKCVYELSAVLIHRGISAYSGHYIAHVNDALTG
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQSRKPKCSKGYHCSRNAYMLVYKLQEEE
GVNPSRPNMEVPAFLQRLVDQDNHKFEEWCTEMADMRKQSVDKGKAKHEEVKELYQLLPA
RDGEQYDFIPLDWLKKWLDDSTATKEIDTSLFLCCHGKLHPDKVGDCKRVSLHAASVLYK
RYGGGPRLDGSSLCRECVSQRCRVLRLKNQLNEDYKEIANMVKQPVSEGYWVGKASLRSW
RQLALEQLEEEEHETKHGSSQTNGQGPHTNNCKEFSPEFSGGGDDEMKTFNEDILCSHGG
LSILDSERKLVSTDVWTKLREYFSRAPEFTQNQEPCRQCMTLEQEEKDNEAVSKMMALDQ
KNQLLNLFHEKNRPTLTKWPQGTDVLYIVPLYFVDEWRKFIRRPTKSSPVSNVGNTLLLC
PHGGFMFTYDSLINGEAQHIALLWPHEWDVISRLFIVDTPISISCLPESTASSSTTQYTT
QPDLCWECRESFLFQQQKDLREYTQATIYIRKVIDDNRAVKDAPPEVNASSSEAEEEREE
LPKMEGDPDFSQSQDGVKRMKLSDGSAASPAALPVSTMTKAGGIRRSTRHRKLRGEKALI
VSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLGVIPESIICLKADEPI
ADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgcgtccagctggagaaggcggcgtggcgctgggtggactcggtgaagccc
gaggagatccggcagcagcacgtcgagctggcctaccgcatacacctggcggcctgcagg
agaggaggctgcaggagaaattgcaaagggaatccaaactgccttgtgggtatcggtgaa
caagcatggcttggagacattgacgagaatgctttccataatattgatgacccaaattca
gaacgtcgagacaagaacacatttgttggcctgaccaaccttggagcgacatgttacgtc
aacacattcctgcaagtgtggttccacaacctggagcttcggaggagcctctatcagtgc
tacaactcccgagcgcaggagcacaactccgagtctgattatgaaccaaagtccatctgt
gagcatctgcagtatctgtttgcactcctgcagaacagcaacaggaagtacatcgaccct
tcagggctggtcaaagcactgggtctggacacggggcagcagcaggatgcccaggagttt
tcaaagctcttcttgtctctgctggaggacactttgtccaagcagaagagccccagcctt
caaaatgtcatccagcagcagttctgtgggcagttcttctatgttacagtgtgtaatcag
tgtggacggtcgtcggcgctgccgtcccgcttttatgagctggagctgaacattcagggc
cacaagagcctgacggagtgtgtcaccgagttcttgaaggaggagaagctggacggggag
aaccgctacttctgcgagagctgtcagagtaaacagagcgccacccggaggatcaagctg
aacagcatccccccaaccctcaacctgcagctcatgcgcttcgtcttcgacagacaaacg
ggtcacaagaagaaactcaacactttcatcagttttccagagcagctggacatggcccct
ttcctggaagggaaacaagaccagaagtgtgtgtatgaactgagcgccgtgttgatccac
cggggcatcagcgcctactcgggccactacatcgctcacgtgaatgacgctctgaccggc
gactggtacaaattcaatgacgaggagatcgagaaaatggaaggcaagaagctgcagctc
ggcatcgaggaggacattgccgagacggtgaagtctcagtcccgaaagcccaagtgcagt
aaaggctaccactgctccaggaacgcttacatgctggtgtacaagctgcaggaggaggag
ggcgtcaacccctccaggcccaacatggaggtgccagcgttccttcagaggctggtggac
caagataaccataaatttgaggagtggtgcacagagatggccgacatgaggaaacagagc
gtggataagggcaaggccaagcatgaagaagtgaaagagctgtaccagctcctacccgcg
agagacggagagcagtatgacttcatccccctggactggctcaagaaatggctggacgac
tccacagcgacgaaggaaatagacacctcccttttcctctgttgtcatggcaaactgcac
cccgacaaggtgggagactgcaagagggtttctctgcacgcggcgtcggtcctctacaag
cgctacggcggcgggcccagactagacggctcgtctctgtgccgagagtgtgtgagccag
cgatgcagagtgctgcggctgaagaaccagctcaatgaagattacaaggaaatcgccaac
atggtcaaacaaccagtcagcgagggttactgggtaggtaaagcatctctgcgcagctgg
aggcagctggcgctggagcagctggaggaagaggagcatgaaaccaaacacggcagcagc
cagaccaacggccagggaccacacaccaacaactgcaaggagttcagtccagagttctca
ggggggggagatgatgagatgaagactttcaatgaagacattctctgcagccacggaggt
ctcagtattctggattctgaacgaaagctggtatctacagacgtctggaccaaacttaga
gagtacttctccagagccccggaattcacccaaaaccaggagccgtgtcgacagtgcatg
acgttggagcaggaggagaaggacaacgaggcggttagtaagatgatggctctcgaccag
aagaaccagctgctcaacctcttccacgaaaagaaccggcccacgctcacaaagtggcct
cagggcaccgatgttctctacatagttcctctgtattttgtggacgagtggagaaagttc
atcaggaggcccaccaagtcgtctcccgtgtccaacgtgggcaacaccctgctgctctgc
ccccacggcggcttcatgttcacctacgactcgctgatcaacggagaggcgcaacatata
gctctgctctggcctcacgagtgggacgtgatcagcagactcttcatcgttgatacgccc
atctccatcagctgcttaccagagagcacggccagcagctccaccacgcagtacaccacc
cagccagatctgtgctgggagtgcagggagagcttcctcttccagcagcagaaggacctc
agagaatacacccaggcaaccatctacatccgcaaggtcatcgacgacaacagggcggtg
aaggacgctcctccggaggtgaacgccagcagctcggaggcagaggaggagagagaagag
ctgcccaagatggagggagacccagacttcagtcagtcgcaggacggtgtgaagcggatg
aagctgagtgacggcagcgcagcgtcaccggccgccctcccggtgagcaccatgaccaaa
gcaggtggaatcaggagaagcactcgacaccggaagctgcgcggggagaaagcgctcata
gtttcggccaatcagactctcaaggagctgaagatacagatcatgcacgccttctccgta
gcgccgttcgatcagaacctctccatcgacgggaagagtctgacggacgactcggccaca
ctgggcagcctgggcgtcatcccagagagcatcatatgtttaaaggctgatgagccgata
gcagattacgctgcgatggatgacgtctaccaggtgagaatgcctgaagaggggtttaaa
ggaacggggcttctcgggcactga
DBGET
integrated database retrieval system